RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 Q6ZNX1 250 aa7.53□□□□□ -1.2
SYMPK-216ENST00000601582 C9orf163Q8N9P6 203 aa7.53□□□□□ -1.2
SYMPK-216ENST00000601582 RPP21Q9H633 154 aaKnown RBP7.53□□□□□ -1.2
SYMPK-216ENST00000601582 TRAV26-2A0A0B4J265 109 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 PANO1I0J062 215 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
SYMPK-216ENST00000601582 GATD1Q8NB37 220 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 GTSF1Q8WW33 167 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 PGLYRP4Q96LB8 373 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 CNFNQ9BYD5 112 aa7.52□□□□□ -1.21
SYMPK-216ENST00000601582 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.52□□□□□ -1.21
SYMPK-216ENST00000601582 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
SYMPK-216ENST00000601582 TAGLN2P37802 199 aaKnown RBP7.51□□□□□ -1.21
SYMPK-216ENST00000601582 SDIM1Q6ZPB5 146 aa7.51□□□□□ -1.21
SYMPK-216ENST00000601582 UBE2L6O14933 153 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 SLPIP03973 132 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 AMTP48728 403 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 COTL1Q14019 142 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 ALKAL2Q6UX46 152 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
SYMPK-216ENST00000601582 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
SYMPK-216ENST00000601582 LRP1Q07954 4544 aaKnown RBP7.49□□□□□ -1.21
SYMPK-216ENST00000601582 hDV102S1A0JD36 115 aa7.49□□□□□ -1.21
SYMPK-216ENST00000601582 ATP6V1G1O75348 118 aa7.49□□□□□ -1.21
SYMPK-216ENST00000601582 hCG_2014768A0A024R1R8 64 aa7.48□□□□□ -1.21
SYMPK-216ENST00000601582 TMEM250H0YL14 139 aa7.48□□□□□ -1.21
SYMPK-216ENST00000601582 GATCO43716 136 aaKnown RBP7.48□□□□□ -1.21
SYMPK-216ENST00000601582 RPL37AP61513 92 aaKnown RBP7.48□□□□□ -1.21
SYMPK-216ENST00000601582 CNBPP62633 177 aaKnown RBP7.48□□□□□ -1.21
SYMPK-216ENST00000601582 BLOC1S1P78537 153 aa7.48□□□□□ -1.21
SYMPK-216ENST00000601582 AKAP14Q86UN6 197 aa7.48□□□□□ -1.21
SYMPK-216ENST00000601582 LYPD6BQ8NI32 183 aa7.48□□□□□ -1.21
SYMPK-216ENST00000601582 IGKV3OR2-268A0A0C4DH90 116 aa7.47□□□□□ -1.21
SYMPK-216ENST00000601582 HNRNPA3P51991 378 aaKnown RBP7.47□□□□□ -1.21
SYMPK-216ENST00000601582 CEBPGP53567 150 aa7.47□□□□□ -1.21
SYMPK-216ENST00000601582 FAM231DQ6ZW35 169 aa7.47□□□□□ -1.21
SYMPK-216ENST00000601582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.46□□□□□ -1.22
SYMPK-216ENST00000601582 IGKV2-29A2NJV5 120 aaPredicted RBP7.46□□□□□ -1.22
SYMPK-216ENST00000601582 GAGE12HA6NDE8 117 aa7.46□□□□□ -1.22
SYMPK-216ENST00000601582 A8MWL6 223 aa7.46□□□□□ -1.22
SYMPK-216ENST00000601582 GAS8-AS1O95177 125 aa7.46□□□□□ -1.22
SYMPK-216ENST00000601582 SMIM15Q7Z3B0 74 aa7.46□□□□□ -1.22
SYMPK-216ENST00000601582 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 OXTP01178 125 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 CHTF8P0CG12 524 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
SYMPK-216ENST00000601582 AMMECR1LQ6DCA0 310 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 RNASEKQ6P5S7 137 aaKnown RBP7.45□□□□□ -1.22
SYMPK-216ENST00000601582 C15orf56Q8N910 161 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 AP5S1Q9NUS5 200 aa7.45□□□□□ -1.22
SYMPK-216ENST00000601582 FAM231BA6NCW3 169 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 NCR2O95944 276 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 APCSP02743 223 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 FGF6P10767 208 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 TEX261Q6UWH6 196 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 CHCHD10Q8WYQ3 142 aaPredicted RBP7.44□□□□□ -1.22
SYMPK-216ENST00000601582 DPH3Q96FX2 82 aa7.44□□□□□ -1.22
SYMPK-216ENST00000601582 IGHV3-64A0A075B6Q5 118 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
SYMPK-216ENST00000601582 PMCHP20382 165 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 HIGD2BQ4VC39 106 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 CT83Q5H943 113 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 LINC01551Q86U37 167 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 SMIM7Q9BQ49 75 aa7.43□□□□□ -1.22
SYMPK-216ENST00000601582 EIF5A2Q9GZV4 153 aaKnown RBP7.43□□□□□ -1.22
SYMPK-216ENST00000601582 A0A087WYN8 130 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 HIGD1CA8MV81 97 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 H7C423 109 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 I3L3M4 83 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
SYMPK-216ENST00000601582 CFAP161Q6P656 301 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 TSKUQ8WUA8 353 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 FAT3Q8TDW7 4589 aa7.42□□□□□ -1.22
SYMPK-216ENST00000601582 A0A1B0GUT8 65 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 ZNF727A8MUV8 499 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 TSHBP01222 138 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 ESDP10768 282 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 RAB4AP20338 218 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
SYMPK-216ENST00000601582 COX6A2Q02221 97 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 SPACA4Q8TDM5 124 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 BORCS7Q96B45 105 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 TMEM191AQ9H0A3 160 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 ST20Q9HBF5 79 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 OSTCQ9NRP0 149 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 TMEM242Q9NWH2 141 aa7.41□□□□□ -1.22
SYMPK-216ENST00000601582 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
SYMPK-216ENST00000601582 FOXI1Q12951 378 aa7.4□□□□□ -1.22
SYMPK-216ENST00000601582 AMN1Q8IY45 258 aa7.4□□□□□ -1.22
SYMPK-216ENST00000601582 OR5A1Q8NGJ0 315 aa7.4□□□□□ -1.22
SYMPK-216ENST00000601582 PRSS3P2Q8NHM4 247 aa7.4□□□□□ -1.22
SYMPK-216ENST00000601582 LINC00959A0A1B0GUT2 108 aa7.39□□□□□ -1.23
SYMPK-216ENST00000601582 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
SYMPK-216ENST00000601582 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
SYMPK-216ENST00000601582 ZNF25P17030 456 aaPredicted RBP7.39□□□□□ -1.23
SYMPK-216ENST00000601582 XCL1P47992 114 aa7.39□□□□□ -1.23
SYMPK-216ENST00000601582 SERTAD4-AS1Q5TG53 156 aa7.39□□□□□ -1.23
SYMPK-216ENST00000601582 TMEM101Q96IK0 257 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms