RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 RBX1P62877 108 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 NRACQ8N912 160 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 UBE2WQ96B02 151 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 ST20Q9HBF5 79 aa13.38□□□□□ -0.27
SSBP4-210ENST00000601444 PSCAO43653 123 aa13.37□□□□□ -0.27
SSBP4-210ENST00000601444 ANGP03950 147 aaKnown RBP13.37□□□□□ -0.27
SSBP4-210ENST00000601444 ELOBQ15370 118 aa13.37□□□□□ -0.27
SSBP4-210ENST00000601444 ENHOQ6UWT2 76 aa13.37□□□□□ -0.27
SSBP4-210ENST00000601444 TMEM70Q9BUB7 260 aa13.37□□□□□ -0.27
SSBP4-210ENST00000601444 PMCHP20382 165 aa13.36□□□□□ -0.27
SSBP4-210ENST00000601444 POLR2KP53803 58 aaKnown RBP13.36□□□□□ -0.27
SSBP4-210ENST00000601444 C10orf91Q5T1B1 145 aa13.36□□□□□ -0.27
SSBP4-210ENST00000601444 LRCOL1A6NCL2 159 aa13.35□□□□□ -0.27
SSBP4-210ENST00000601444 I3L3M4 83 aa13.35□□□□□ -0.27
SSBP4-210ENST00000601444 PKIAP61925 76 aa13.35□□□□□ -0.27
SSBP4-210ENST00000601444 ATP5L2Q7Z4Y8 100 aa13.35□□□□□ -0.27
SSBP4-210ENST00000601444 MAPKAPK5-AS1Q8N8E1 139 aa13.35□□□□□ -0.27
SSBP4-210ENST00000601444 IGLV4-60A0A075B6I1 120 aa13.34□□□□□ -0.27
SSBP4-210ENST00000601444 TSHBP01222 138 aa13.34□□□□□ -0.27
SSBP4-210ENST00000601444 S100A8P05109 93 aa13.34□□□□□ -0.27
SSBP4-210ENST00000601444 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
SSBP4-210ENST00000601444 TMEM242Q9NWH2 141 aa13.34□□□□□ -0.27
SSBP4-210ENST00000601444 IGKV2D-24A0A075B6R9 120 aa13.33□□□□□ -0.28
SSBP4-210ENST00000601444 CKS2P33552 79 aa13.33□□□□□ -0.28
SSBP4-210ENST00000601444 LINC00269Q8N2A0 174 aa13.33□□□□□ -0.28
SSBP4-210ENST00000601444 C20orf203Q8NBC4 194 aa13.33□□□□□ -0.28
SSBP4-210ENST00000601444 TM2D2Q9BX73 214 aa13.33□□□□□ -0.28
SSBP4-210ENST00000601444 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
SSBP4-210ENST00000601444 TRBV27A0A0K0K1C4 114 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
SSBP4-210ENST00000601444 C16orf90A8MZG2 172 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 D6R8Y8 96 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 UBE2L6O14933 153 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 APCSP02743 223 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 WFDC2Q14508 124 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 CTDSP1Q9GZU7 261 aa13.32□□□□□ -0.28
SSBP4-210ENST00000601444 CARHSP1Q9Y2V2 147 aaKnown RBP13.32□□□□□ -0.28
SSBP4-210ENST00000601444 DNAH5Q8TE73 4624 aa13.31□□□□□ -0.28
SSBP4-210ENST00000601444 EREGO14944 169 aa13.31□□□□□ -0.28
SSBP4-210ENST00000601444 SUMO2P61956 95 aaKnown RBP13.31□□□□□ -0.28
SSBP4-210ENST00000601444 Q0VG73 95 aa13.31□□□□□ -0.28
SSBP4-210ENST00000601444 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
SSBP4-210ENST00000601444 A0A1B0GUV1 79 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 VCYO14598 125 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 LECT2O14960 151 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 TNFRSF6BO95407 300 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 PPP1R17O96001 155 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 CRPP02741 224 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 IMMP2LQ96T52 175 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 PRR34Q9NV39 138 aa13.3□□□□□ -0.28
SSBP4-210ENST00000601444 TRBV24-1A0A075B6N3 115 aa13.29□□□□□ -0.28
SSBP4-210ENST00000601444 C7orf77A4D0Y5 90 aa13.29□□□□□ -0.28
SSBP4-210ENST00000601444 ESDP10768 282 aa13.29□□□□□ -0.28
SSBP4-210ENST00000601444 BAALCQ8WXS3 180 aa13.29□□□□□ -0.28
SSBP4-210ENST00000601444 RMI2Q96E14 147 aa13.29□□□□□ -0.28
SSBP4-210ENST00000601444 NPYP01303 97 aa13.28□□□□□ -0.28
SSBP4-210ENST00000601444 CLRN3Q8NCR9 226 aa13.28□□□□□ -0.28
SSBP4-210ENST00000601444 LRP1BQ9NZR2 4599 aa13.28□□□□□ -0.28
SSBP4-210ENST00000601444 REG3AQ06141 175 aa13.27□□□□□ -0.29
SSBP4-210ENST00000601444 C20orf78Q9BR46 151 aa13.27□□□□□ -0.29
SSBP4-210ENST00000601444 C1orf43Q9BWL3 253 aa13.27□□□□□ -0.29
SSBP4-210ENST00000601444 COX11Q9Y6N1 276 aa13.27□□□□□ -0.29
SSBP4-210ENST00000601444 FGF6P10767 208 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 MIAQ16674 131 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 RNASEKQ6P5S7 137 aaKnown RBP13.26□□□□□ -0.29
SSBP4-210ENST00000601444 TMEM136Q6ZRR5 245 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 Q8N814 137 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 RPS10P5Q9NQ39 176 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 PGPEP1Q9NXJ5 209 aa13.26□□□□□ -0.29
SSBP4-210ENST00000601444 IGLV10-54A0A075B6I4 117 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 H7C423 109 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 PPBPP02775 128 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 FCER1GP30273 86 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 AMMECR1LQ6DCA0 310 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 ORMDL3Q8N138 153 aa13.25□□□□□ -0.29
SSBP4-210ENST00000601444 APOC3P02656 99 aa13.24□□□□□ -0.29
SSBP4-210ENST00000601444 KRTAP26-1Q6PEX3 210 aa13.24□□□□□ -0.29
SSBP4-210ENST00000601444 PRELID3AQ96N28 172 aa13.24□□□□□ -0.29
SSBP4-210ENST00000601444 KIR2DL4Q99706 377 aa13.24□□□□□ -0.29
SSBP4-210ENST00000601444 RPL32P62910 135 aaKnown RBP13.23□□□□□ -0.29
SSBP4-210ENST00000601444 RHEBQ15382 184 aa13.23□□□□□ -0.29
SSBP4-210ENST00000601444 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
SSBP4-210ENST00000601444 KIAA1109Q2LD37 5005 aa13.23□□□□□ -0.29
SSBP4-210ENST00000601444 IGKV3OR2-268A0A0C4DH90 116 aa13.22□□□□□ -0.29
SSBP4-210ENST00000601444 PHOX2AO14813 284 aa13.22□□□□□ -0.29
SSBP4-210ENST00000601444 TRAV9-1A0A075B6T8 112 aa13.21□□□□□ -0.29
SSBP4-210ENST00000601444 HLA-DQA1P01909 254 aa13.21□□□□□ -0.29
SSBP4-210ENST00000601444 S100PP25815 95 aa13.21□□□□□ -0.29
SSBP4-210ENST00000601444 TCAPO15273 167 aa13.2□□□□□ -0.3
SSBP4-210ENST00000601444 CDPF1Q6NVV7 123 aa13.2□□□□□ -0.3
SSBP4-210ENST00000601444 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.19□□□□□ -0.3
SSBP4-210ENST00000601444 IGLV5-52A0A0A0MRZ9 124 aa13.19□□□□□ -0.3
SSBP4-210ENST00000601444 LOC389332A0A1B0GUA5 103 aa13.19□□□□□ -0.3
SSBP4-210ENST00000601444 ZNF25P17030 456 aaPredicted RBP13.19□□□□□ -0.3
SSBP4-210ENST00000601444 SLC7A5P1Q8MH63 180 aa13.19□□□□□ -0.3
SSBP4-210ENST00000601444 TRAV8-4A0A0B4J246 113 aa13.18□□□□□ -0.3
SSBP4-210ENST00000601444 KRTAP10-1P60331 282 aa13.18□□□□□ -0.3
SSBP4-210ENST00000601444 KIAA1644Q3SXP7 199 aa13.18□□□□□ -0.3
SSBP4-210ENST00000601444 MRPL52Q86TS9 123 aaKnown RBP13.18□□□□□ -0.3
SSBP4-210ENST00000601444 OR5A1Q8NGJ0 315 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms