RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
SNRPA-204ENST00000598452 AP5S1Q9NUS5 200 aa12.14□□□□□ -0.47
SNRPA-204ENST00000598452 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
SNRPA-204ENST00000598452 C20orf203Q8NBC4 194 aa12.13□□□□□ -0.47
SNRPA-204ENST00000598452 NUDT10Q8NFP7 164 aa12.13□□□□□ -0.47
SNRPA-204ENST00000598452 NUDT11Q96G61 164 aa12.13□□□□□ -0.47
SNRPA-204ENST00000598452 HMCN2Q8NDA2 5059 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 TRBV20OR9-2A0A075B6H5 130 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 CTRLP40313 264 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 TWIST1Q15672 202 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 SERTAD4-AS1Q5TG53 156 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 SDIM1Q6ZPB5 146 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 SMIM15Q7Z3B0 74 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 CNFNQ9BYD5 112 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 GFRA4Q9GZZ7 299 aa12.12□□□□□ -0.47
SNRPA-204ENST00000598452 IGLV4-60A0A075B6I1 120 aa12.11□□□□□ -0.47
SNRPA-204ENST00000598452 AMTP48728 403 aa12.11□□□□□ -0.47
SNRPA-204ENST00000598452 CNBPP62633 177 aaKnown RBP12.11□□□□□ -0.47
SNRPA-204ENST00000598452 RPP21Q9H633 154 aaKnown RBP12.11□□□□□ -0.47
SNRPA-204ENST00000598452 hDV102S1A0JD36 115 aa12.1□□□□□ -0.47
SNRPA-204ENST00000598452 TEX261Q6UWH6 196 aa12.1□□□□□ -0.47
SNRPA-204ENST00000598452 PKHD1L1Q86WI1 4243 aa12.09□□□□□ -0.47
SNRPA-204ENST00000598452 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
SNRPA-204ENST00000598452 IGHV3-64A0A075B6Q5 118 aa12.08□□□□□ -0.48
SNRPA-204ENST00000598452 NCR2O95944 276 aa12.08□□□□□ -0.48
SNRPA-204ENST00000598452 H7C423 109 aa12.07□□□□□ -0.48
SNRPA-204ENST00000598452 SLPIP03973 132 aa12.07□□□□□ -0.48
SNRPA-204ENST00000598452 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
SNRPA-204ENST00000598452 RNF185Q96GF1 192 aa12.07□□□□□ -0.48
SNRPA-204ENST00000598452 TMEM250H0YL14 139 aa12.06□□□□□ -0.48
SNRPA-204ENST00000598452 BLOC1S1P78537 153 aa12.06□□□□□ -0.48
SNRPA-204ENST00000598452 AMMECR1LQ6DCA0 310 aa12.06□□□□□ -0.48
SNRPA-204ENST00000598452 GATD1Q8NB37 220 aa12.06□□□□□ -0.48
SNRPA-204ENST00000598452 CIRBPQ14011 172 aaKnown RBP12.05□□□□□ -0.48
SNRPA-204ENST00000598452 DPH3Q96FX2 82 aa12.05□□□□□ -0.48
SNRPA-204ENST00000598452 FAM210AQ96ND0 272 aa12.05□□□□□ -0.48
SNRPA-204ENST00000598452 RNASE7Q9H1E1 156 aaKnown RBP12.05□□□□□ -0.48
SNRPA-204ENST00000598452 A8MWL6 223 aa12.04□□□□□ -0.48
SNRPA-204ENST00000598452 GATCO43716 136 aaKnown RBP12.04□□□□□ -0.48
SNRPA-204ENST00000598452 CHTF8P0CG12 524 aa12.04□□□□□ -0.48
SNRPA-204ENST00000598452 K7EN84 100 aa12.03□□□□□ -0.48
SNRPA-204ENST00000598452 BORCS7Q96B45 105 aa12.03□□□□□ -0.48
SNRPA-204ENST00000598452 PLA2G2DQ9UNK4 145 aa12.03□□□□□ -0.48
SNRPA-204ENST00000598452 TRAV26-2A0A0B4J265 109 aa12.02□□□□□ -0.49
SNRPA-204ENST00000598452 APCSP02743 223 aa12.02□□□□□ -0.49
SNRPA-204ENST00000598452 FAM231DQ6ZW35 169 aa12.02□□□□□ -0.49
SNRPA-204ENST00000598452 IGKV3OR2-268A0A0C4DH90 116 aa12.01□□□□□ -0.49
SNRPA-204ENST00000598452 ZNF25P17030 456 aaPredicted RBP12.01□□□□□ -0.49
SNRPA-204ENST00000598452 A0A087WYN8 130 aa12□□□□□ -0.49
SNRPA-204ENST00000598452 GAGE12HA6NDE8 117 aa12□□□□□ -0.49
SNRPA-204ENST00000598452 CT83Q5H943 113 aa12□□□□□ -0.49
SNRPA-204ENST00000598452 RNASEKQ6P5S7 137 aaKnown RBP12□□□□□ -0.49
SNRPA-204ENST00000598452 C15orf56Q8N910 161 aa12□□□□□ -0.49
SNRPA-204ENST00000598452 BTF3L4Q96K17 158 aa12□□□□□ -0.49
SNRPA-204ENST00000598452 SDHAF1A6NFY7 115 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 PMCHP20382 165 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 RPS10P46783 165 aaKnown RBP11.99□□□□□ -0.49
SNRPA-204ENST00000598452 FOXA3P55318 350 aaPredicted RBP11.99□□□□□ -0.49
SNRPA-204ENST00000598452 Q6ZNX1 250 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 GTSF1Q8WW33 167 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 RPL39LQ96EH5 51 aaKnown RBP11.99□□□□□ -0.49
SNRPA-204ENST00000598452 TMEM101Q96IK0 257 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 PKIGQ9Y2B9 76 aa11.99□□□□□ -0.49
SNRPA-204ENST00000598452 I3L3M4 83 aa11.98□□□□□ -0.49
SNRPA-204ENST00000598452 NDUFS6O75380 124 aaKnown RBP11.98□□□□□ -0.49
SNRPA-204ENST00000598452 MT1HL1P0DM35 61 aa11.98□□□□□ -0.49
SNRPA-204ENST00000598452 Q6ZRU5 148 aa11.98□□□□□ -0.49
SNRPA-204ENST00000598452 SPACA4Q8TDM5 124 aa11.98□□□□□ -0.49
SNRPA-204ENST00000598452 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
SNRPA-204ENST00000598452 UBR4Q5T4S7 5183 aa11.98□□□□□ -0.49
SNRPA-204ENST00000598452 TRBV6-5A0A0K0K1A5 114 aa11.97□□□□□ -0.49
SNRPA-204ENST00000598452 FGF6P10767 208 aa11.97□□□□□ -0.49
SNRPA-204ENST00000598452 HIGD2BQ4VC39 106 aa11.97□□□□□ -0.49
SNRPA-204ENST00000598452 AKAP14Q86UN6 197 aa11.97□□□□□ -0.49
SNRPA-204ENST00000598452 LYPD6BQ8NI32 183 aa11.97□□□□□ -0.49
SNRPA-204ENST00000598452 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.96□□□□□ -0.49
SNRPA-204ENST00000598452 IGKV2-29A2NJV5 120 aaPredicted RBP11.96□□□□□ -0.49
SNRPA-204ENST00000598452 ALKAL2Q6UX46 152 aa11.96□□□□□ -0.49
SNRPA-204ENST00000598452 OR5A1Q8NGJ0 315 aa11.96□□□□□ -0.49
SNRPA-204ENST00000598452 C7orf33Q8WU49 177 aa11.96□□□□□ -0.49
SNRPA-204ENST00000598452 ST20Q9HBF5 79 aa11.96□□□□□ -0.49
SNRPA-204ENST00000598452 FAM231BA6NCW3 169 aa11.95□□□□□ -0.5
SNRPA-204ENST00000598452 COX6A2Q02221 97 aa11.95□□□□□ -0.5
SNRPA-204ENST00000598452 A0A1B0GUT8 65 aa11.94□□□□□ -0.5
SNRPA-204ENST00000598452 CEBPGP53567 150 aa11.94□□□□□ -0.5
SNRPA-204ENST00000598452 PRSS3P2Q8NHM4 247 aa11.94□□□□□ -0.5
SNRPA-204ENST00000598452 TSKUQ8WUA8 353 aa11.94□□□□□ -0.5
SNRPA-204ENST00000598452 EIF5A2Q9GZV4 153 aaKnown RBP11.94□□□□□ -0.5
SNRPA-204ENST00000598452 PLAC8Q9NZF1 115 aa11.94□□□□□ -0.5
SNRPA-204ENST00000598452 GVQW2A0A096LPI5 108 aaPredicted RBP11.93□□□□□ -0.5
SNRPA-204ENST00000598452 PHOX2AO14813 284 aa11.93□□□□□ -0.5
SNRPA-204ENST00000598452 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
SNRPA-204ENST00000598452 SMIM7Q9BQ49 75 aa11.93□□□□□ -0.5
SNRPA-204ENST00000598452 TMEM191AQ9H0A3 160 aa11.93□□□□□ -0.5
SNRPA-204ENST00000598452 PPP1R17O96001 155 aa11.92□□□□□ -0.5
SNRPA-204ENST00000598452 SMAGPQ0VAQ4 97 aa11.92□□□□□ -0.5
SNRPA-204ENST00000598452 OSTCQ9NRP0 149 aa11.92□□□□□ -0.5
SNRPA-204ENST00000598452 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
SNRPA-204ENST00000598452 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
SNRPA-204ENST00000598452 HIGD1CA8MV81 97 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms