RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 PRSS3P2Q8NHM4 247 aa10.4□□□□□ -0.74
ATG4D-211ENST00000589753 C18orf32Q8TCD1 76 aa10.4□□□□□ -0.74
ATG4D-211ENST00000589753 LINC00476Q8WZB0 136 aa10.4□□□□□ -0.74
ATG4D-211ENST00000589753 LY6G6CO95867 125 aa10.39□□□□□ -0.75
ATG4D-211ENST00000589753 WFDC10BQ8IUB3 73 aa10.39□□□□□ -0.75
ATG4D-211ENST00000589753 CHCHD5Q9BSY4 110 aa10.39□□□□□ -0.75
ATG4D-211ENST00000589753 TMEM243Q9BU79 118 aa10.39□□□□□ -0.75
ATG4D-211ENST00000589753 SIVA1O15304 175 aa10.38□□□□□ -0.75
ATG4D-211ENST00000589753 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
ATG4D-211ENST00000589753 K7EMI3 77 aa10.37□□□□□ -0.75
ATG4D-211ENST00000589753 UBE2L6O14933 153 aa10.37□□□□□ -0.75
ATG4D-211ENST00000589753 ESDP10768 282 aa10.37□□□□□ -0.75
ATG4D-211ENST00000589753 Q9H8V8 135 aa10.37□□□□□ -0.75
ATG4D-211ENST00000589753 TENM2Q9NT68 2774 aa10.37□□□□□ -0.75
ATG4D-211ENST00000589753 PKIAP61925 76 aa10.36□□□□□ -0.75
ATG4D-211ENST00000589753 GAGE6Q13070 117 aa10.36□□□□□ -0.75
ATG4D-211ENST00000589753 FA2HQ7L5A8 372 aa10.36□□□□□ -0.75
ATG4D-211ENST00000589753 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.35□□□□□ -0.75
ATG4D-211ENST00000589753 IGKV2-29A2NJV5 120 aaPredicted RBP10.35□□□□□ -0.75
ATG4D-211ENST00000589753 TMEM262E9PQX1 116 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 H7C423 109 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 RAB5BP61020 215 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 Q0VG73 95 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 LAGE3Q14657 143 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 NIT1Q86X76 327 aa10.35□□□□□ -0.75
ATG4D-211ENST00000589753 A0A087WX48 190 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 LINC01546A6NGU7 62 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 C1orf196B1AJZ1 125 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 LINC00614P0C842 121 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 DNAH10OSP0CZ25 163 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 C20orf203Q8NBC4 194 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 TMEM18Q96B42 140 aa10.34□□□□□ -0.75
ATG4D-211ENST00000589753 PLECQ15149 4684 aaKnown RBP10.33□□□□□ -0.76
ATG4D-211ENST00000589753 LCE6AA0A183 80 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BKO60814 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 IGHV3-30P01768 117 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 IGHV3-33P01772 117 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BJP06899 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 IGHV3-30-3P0DP02 117 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 IGHV3-30-5P0DP03 117 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BOP23527 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BBP33778 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BDP58876 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BCP62807 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST2H2BEQ16778 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.33□□□□□ -0.76
ATG4D-211ENST00000589753 RNASEKQ6P5S7 137 aaKnown RBP10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BHQ93079 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BNQ99877 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 HIST1H2BMQ99879 126 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
ATG4D-211ENST00000589753 MPV17L2Q567V2 206 aa10.32□□□□□ -0.76
ATG4D-211ENST00000589753 AMMECR1LQ6DCA0 310 aa10.32□□□□□ -0.76
ATG4D-211ENST00000589753 Q8N3U1 123 aa10.32□□□□□ -0.76
ATG4D-211ENST00000589753 FGF6P10767 208 aa10.31□□□□□ -0.76
ATG4D-211ENST00000589753 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
ATG4D-211ENST00000589753 G0S2P27469 103 aa10.31□□□□□ -0.76
ATG4D-211ENST00000589753 RBX1P62877 108 aa10.31□□□□□ -0.76
ATG4D-211ENST00000589753 SMAGPQ0VAQ4 97 aa10.31□□□□□ -0.76
ATG4D-211ENST00000589753 CHCHD1Q96BP2 118 aaKnown RBP10.31□□□□□ -0.76
ATG4D-211ENST00000589753 TRAV9-2A0A087WT02 112 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 ZNF25P17030 456 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-211ENST00000589753 RPL39P62891 51 aaKnown RBP10.3□□□□□ -0.76
ATG4D-211ENST00000589753 C2orf66Q6UXQ4 117 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
ATG4D-211ENST00000589753 Q8N976 141 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 CYSLTR1Q9Y271 337 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 UBE2D4Q9Y2X8 147 aa10.3□□□□□ -0.76
ATG4D-211ENST00000589753 NBDYA0A0U1RRE5 68 aa10.29□□□□□ -0.76
ATG4D-211ENST00000589753 K7EP13 123 aa10.29□□□□□ -0.76
ATG4D-211ENST00000589753 TTC32Q5I0X7 151 aa10.29□□□□□ -0.76
ATG4D-211ENST00000589753 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
ATG4D-211ENST00000589753 TMEM101Q96IK0 257 aa10.29□□□□□ -0.76
ATG4D-211ENST00000589753 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
ATG4D-211ENST00000589753 SERF1AO75920 110 aa10.28□□□□□ -0.76
ATG4D-211ENST00000589753 ANGP03950 147 aaKnown RBP10.28□□□□□ -0.76
ATG4D-211ENST00000589753 DGAT2L7PQ6IED9 249 aa10.28□□□□□ -0.76
ATG4D-211ENST00000589753 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
ATG4D-211ENST00000589753 TIMM21Q9BVV7 248 aa10.28□□□□□ -0.76
ATG4D-211ENST00000589753 HSBP1O75506 76 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 LINC00310P59036 64 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 PMCHL1Q16048 86 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 TOMM6Q96B49 74 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 SPANXA1Q9NS26 97 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 KLK12Q9UKR0 248 aa10.27□□□□□ -0.77
ATG4D-211ENST00000589753 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
ATG4D-211ENST00000589753 LINC01549A6NIU2 74 aa10.26□□□□□ -0.77
ATG4D-211ENST00000589753 M0R2N4 97 aa10.26□□□□□ -0.77
ATG4D-211ENST00000589753 HBDP02042 147 aa10.26□□□□□ -0.77
ATG4D-211ENST00000589753 KRTAP1-5Q9BYS1 174 aa10.26□□□□□ -0.77
ATG4D-211ENST00000589753 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
ATG4D-211ENST00000589753 A0A096LNJ9 63 aa10.25□□□□□ -0.77
ATG4D-211ENST00000589753 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
ATG4D-211ENST00000589753 NDUFA6P56556 154 aa10.25□□□□□ -0.77
ATG4D-211ENST00000589753 Q6ZR54 194 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms