RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 SDIM1Q6ZPB5 146 aa4.11□□□□□ -1.75
SDF2-205ENST00000587629 TCEAL7Q9BRU2 100 aa4.11□□□□□ -1.75
SDF2-205ENST00000587629 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
SDF2-205ENST00000587629 TMA7Q9Y2S6 64 aaKnown RBP4.11□□□□□ -1.75
SDF2-205ENST00000587629 HMCN2Q8NDA2 5059 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 FAT3Q8TDW7 4589 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 PKHD1L1Q86WI1 4243 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 IGHV1-24A0A0C4DH33 117 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 BCL2L11O43521 198 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 SNAI2O43623 268 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 S100A9P06702 114 aaKnown RBP4.1□□□□□ -1.75
SDF2-205ENST00000587629 OR5AL1P0C617 328 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 CHTF8P0CG12 524 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 PKIAP61925 76 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 MLST8Q9BVC4 326 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 GFRA4Q9GZZ7 299 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 PRR34Q9NV39 138 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 VAX2Q9UIW0 290 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 KIF25-AS1Q9Y6Z4 181 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 UBR4Q5T4S7 5183 aa4.1□□□□□ -1.75
SDF2-205ENST00000587629 IGLV4-60A0A075B6I1 120 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 M0QY20 66 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 SLPIP03973 132 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 CXCL1P09341 107 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 MT1HL1P0DM35 61 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 RPL35P42766 123 aaKnown RBP4.09□□□□□ -1.75
SDF2-205ENST00000587629 BLOC1S1P78537 153 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 IQCJQ1A5X6 159 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 TMEM97Q5BJF2 176 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 SUMO4Q6EEV6 95 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 ALKAL2Q6UX46 152 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 SVBPQ8N300 66 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 MBD3L1Q8WWY6 194 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 AP1S3Q96PC3 154 aa4.09□□□□□ -1.75
SDF2-205ENST00000587629 IGHV3-64A0A075B6Q5 118 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 A0A087WYN8 130 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 IGKV3OR2-268A0A0C4DH90 116 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 SNAPINO95295 136 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 CNBPP62633 177 aaKnown RBP4.08□□□□□ -1.76
SDF2-205ENST00000587629 CCL20P78556 96 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 C20orf203Q8NBC4 194 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 CLRN3Q8NCR9 226 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 OR2D3Q8NGH3 330 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 TMEM243Q9BU79 118 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 SMDT1Q9H4I9 107 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 AP5S1Q9NUS5 200 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 GNG13Q9P2W3 67 aa4.08□□□□□ -1.76
SDF2-205ENST00000587629 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.07□□□□□ -1.76
SDF2-205ENST00000587629 UMAD1C9J7I0 102 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 H7C1H1 209 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 UBE2L6O14933 153 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 SULT1A2P50226 295 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 S100A12P80511 92 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 ODF1Q14990 250 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 HIGD2BQ4VC39 106 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 C10orf91Q5T1B1 145 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 RASL11AQ6T310 242 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 Q6ZRU5 148 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 SEC11CQ9BY50 192 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 DPH3P1Q9H4G8 78 aa4.07□□□□□ -1.76
SDF2-205ENST00000587629 CARHSP1Q9Y2V2 147 aaKnown RBP4.07□□□□□ -1.76
SDF2-205ENST00000587629 TRAV8-4A0A0B4J246 113 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 TRAV26-2A0A0B4J265 109 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 IGKV2-24A0A0C4DH68 120 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 A0A1B0GUV1 79 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 TMEM218A2RU14 115 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 GAGE12HA6NDE8 117 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 PHOX2AO14813 284 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 IFNA1P01562 189 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 P01737 135 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 APOC3P02656 99 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 IGLC6P0CF74 106 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 NTF3P20783 257 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 AMTP48728 403 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 CACNG7P62955 275 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 COX6A2Q02221 97 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 CIRBPQ14011 172 aaKnown RBP4.06□□□□□ -1.76
SDF2-205ENST00000587629 MAJINQ3KP22 176 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 LYPD6BQ8NI32 183 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 SPACA4Q8TDM5 124 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 GTSF1Q8WW33 167 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 NIT2Q9NQR4 276 aa4.06□□□□□ -1.76
SDF2-205ENST00000587629 C19orf71A6NCJ1 209 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 GNG4P50150 75 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 RPS20P60866 119 aaKnown RBP4.05□□□□□ -1.76
SDF2-205ENST00000587629 COTL1Q14019 142 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 TWIST1Q15672 202 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 WDR73Q6P4I2 378 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 C15orf56Q8N910 161 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 PRSS3P2Q8NHM4 247 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 C7orf33Q8WU49 177 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 MANBALQ9NQG1 85 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 BIN3Q9NQY0 253 aa4.05□□□□□ -1.76
SDF2-205ENST00000587629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
SDF2-205ENST00000587629 XKRY2A2RUG3 117 aa4.04□□□□□ -1.76
SDF2-205ENST00000587629 F2Z2F3 143 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms