RNA–Protein interactions for RNA: ENST00000582821.5

GGA3-215, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 1,018 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-215ENST00000582821 NAT8BQ9UHF3 227 aa9.23□□□□□ -0.93
GGA3-215ENST00000582821 IGLV5-52A0A0A0MRZ9 124 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 NCR2O95944 276 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 CRPP02741 224 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 MIAQ16674 131 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 BAALCQ8WXS3 180 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 RPL39LQ96EH5 51 aaKnown RBP9.22□□□□□ -0.93
GGA3-215ENST00000582821 RNF185Q96GF1 192 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
GGA3-215ENST00000582821 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.94
GGA3-215ENST00000582821 RAB4AP20338 218 aa9.21□□□□□ -0.94
GGA3-215ENST00000582821 MRAP2Q96G30 205 aa9.21□□□□□ -0.94
GGA3-215ENST00000582821 LINC00269Q8N2A0 174 aa9.2□□□□□ -0.94
GGA3-215ENST00000582821 C20orf203Q8NBC4 194 aa9.2□□□□□ -0.94
GGA3-215ENST00000582821 DNAH8Q96JB1 4490 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 A0A1B0GW15 77 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 AMTP48728 403 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 POLR2KP53803 58 aaKnown RBP9.19□□□□□ -0.94
GGA3-215ENST00000582821 XGP55808 180 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 CLLU1Q5K131 121 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 AMN1Q8IY45 258 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
GGA3-215ENST00000582821 IGLV4-60A0A075B6I1 120 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 H7C423 109 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 I3L3M4 83 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 UBE2L6O14933 153 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 LECT2O14960 151 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 GAS8-AS1O95177 125 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 REG3AQ06141 175 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 KRTAP26-1Q6PEX3 210 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 DEFB104AQ8WTQ1 72 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 ST20Q9HBF5 79 aa9.18□□□□□ -0.94
GGA3-215ENST00000582821 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 TRAV8-4A0A0B4J246 113 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 PPP1R17O96001 155 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 PMCHP20382 165 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 FAM104BQ5XKR9 115 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 Q8N1X5 172 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 TMEM70Q9BUB7 260 aa9.17□□□□□ -0.94
GGA3-215ENST00000582821 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
GGA3-215ENST00000582821 APCSP02743 223 aa9.16□□□□□ -0.94
GGA3-215ENST00000582821 RPS10P46783 165 aaKnown RBP9.16□□□□□ -0.94
GGA3-215ENST00000582821 IFITM2Q01629 132 aa9.16□□□□□ -0.94
GGA3-215ENST00000582821 PNRC1Q12796 327 aaPredicted RBP9.16□□□□□ -0.94
GGA3-215ENST00000582821 C14orf177Q52M58 125 aa9.16□□□□□ -0.94
GGA3-215ENST00000582821 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
GGA3-215ENST00000582821 FAT1Q14517 4588 aa9.15□□□□□ -0.94
GGA3-215ENST00000582821 LINC00862A6NCI5 91 aa9.15□□□□□ -0.94
GGA3-215ENST00000582821 S100A8P05109 93 aa9.15□□□□□ -0.94
GGA3-215ENST00000582821 ESDP10768 282 aa9.15□□□□□ -0.94
GGA3-215ENST00000582821 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.95
GGA3-215ENST00000582821 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.14□□□□□ -0.95
GGA3-215ENST00000582821 A0A1B0GXF2 115 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 VCYO14598 125 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 TSHBP01222 138 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 CAMPP49913 170 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 MRPL51Q4U2R6 128 aaKnown RBP9.14□□□□□ -0.95
GGA3-215ENST00000582821 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 NRACQ8N912 160 aa9.14□□□□□ -0.95
GGA3-215ENST00000582821 TRBV24-1A0A075B6N3 115 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 SMKR1H3BMG3 65 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 FGF6P10767 208 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
GGA3-215ENST00000582821 HBBP68871 147 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 ANAPC16Q96DE5 110 aa9.13□□□□□ -0.95
GGA3-215ENST00000582821 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.12□□□□□ -0.95
GGA3-215ENST00000582821 IGKV2-29A2NJV5 120 aaPredicted RBP9.12□□□□□ -0.95
GGA3-215ENST00000582821 F8W036 122 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 HLA-DQA1P01909 254 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 MT-ND4LP03901 98 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 SUMO2P61956 95 aaKnown RBP9.12□□□□□ -0.95
GGA3-215ENST00000582821 RPL32P62910 135 aaKnown RBP9.12□□□□□ -0.95
GGA3-215ENST00000582821 AMMECR1LQ6DCA0 310 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 ATP5L2Q7Z4Y8 100 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 C20orf78Q9BR46 151 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 TMEM242Q9NWH2 141 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 FAM30AQ9NZY2 134 aa9.12□□□□□ -0.95
GGA3-215ENST00000582821 IGLV10-54A0A075B6I4 117 aa9.11□□□□□ -0.95
GGA3-215ENST00000582821 MRPL54Q6P161 138 aaKnown RBP9.11□□□□□ -0.95
GGA3-215ENST00000582821 RNASEKQ6P5S7 137 aaKnown RBP9.11□□□□□ -0.95
GGA3-215ENST00000582821 Q6ZSA8 131 aa9.11□□□□□ -0.95
GGA3-215ENST00000582821 CLRN3Q8NCR9 226 aa9.11□□□□□ -0.95
GGA3-215ENST00000582821 PRSS1P07477 247 aa9.1□□□□□ -0.95
GGA3-215ENST00000582821 CKS2P33552 79 aa9.1□□□□□ -0.95
GGA3-215ENST00000582821 DGAT2L7PQ6IED9 249 aa9.1□□□□□ -0.95
GGA3-215ENST00000582821 MRPL52Q86TS9 123 aaKnown RBP9.1□□□□□ -0.95
GGA3-215ENST00000582821 TMEM218A2RU14 115 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 C7orf77A4D0Y5 90 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 PHOX2AO14813 284 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 PPBPP02775 128 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 TMEM101Q96IK0 257 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 BTF3L4Q96K17 158 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
GGA3-215ENST00000582821 TCAPO15273 167 aa9.08□□□□□ -0.96
GGA3-215ENST00000582821 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
GGA3-215ENST00000582821 OR5A1Q8NGJ0 315 aa9.08□□□□□ -0.96
GGA3-215ENST00000582821 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms