RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 C14orf177Q52M58 125 aa15.02■□□□□ -0
VAPA-205ENST00000578314 COTL1Q14019 142 aa15.01□□□□□ -0.01
VAPA-205ENST00000578314 KRTAP26-1Q6PEX3 210 aa15.01□□□□□ -0.01
VAPA-205ENST00000578314 OSTCQ9NRP0 149 aa15.01□□□□□ -0.01
VAPA-205ENST00000578314 TEX261Q6UWH6 196 aa15□□□□□ -0.01
VAPA-205ENST00000578314 C20orf203Q8NBC4 194 aa15□□□□□ -0.01
VAPA-205ENST00000578314 TSKUQ8WUA8 353 aa15□□□□□ -0.01
VAPA-205ENST00000578314 GFRA4Q9GZZ7 299 aa15□□□□□ -0.01
VAPA-205ENST00000578314 FAM231BA6NCW3 169 aa14.99□□□□□ -0.01
VAPA-205ENST00000578314 REG3AQ06141 175 aa14.99□□□□□ -0.01
VAPA-205ENST00000578314 LINC01620Q4KN68 170 aa14.99□□□□□ -0.01
VAPA-205ENST00000578314 CLPSL2Q6UWE3 100 aa14.99□□□□□ -0.01
VAPA-205ENST00000578314 DEFB104AQ8WTQ1 72 aa14.99□□□□□ -0.01
VAPA-205ENST00000578314 FAM229AH3BQW9 127 aa14.98□□□□□ -0.01
VAPA-205ENST00000578314 AMTP48728 403 aa14.98□□□□□ -0.01
VAPA-205ENST00000578314 RPL39LQ96EH5 51 aaKnown RBP14.98□□□□□ -0.01
VAPA-205ENST00000578314 SRRM2Q9UQ35 2752 aaKnown RBP14.97□□□□□ -0.01
VAPA-205ENST00000578314 IGLV4-60A0A075B6I1 120 aa14.97□□□□□ -0.01
VAPA-205ENST00000578314 USP17L23D6RBM5 183 aa14.97□□□□□ -0.01
VAPA-205ENST00000578314 FAM74A3Q4VXF1 159 aa14.97□□□□□ -0.01
VAPA-205ENST00000578314 BORCS7Q96B45 105 aa14.97□□□□□ -0.01
VAPA-205ENST00000578314 HIGD1CA8MV81 97 aa14.96□□□□□ -0.01
VAPA-205ENST00000578314 HLA-DQA1P01909 254 aa14.96□□□□□ -0.01
VAPA-205ENST00000578314 TRAV8-4A0A0B4J246 113 aa14.95□□□□□ -0.02
VAPA-205ENST00000578314 A0A1B0GUT8 65 aa14.95□□□□□ -0.02
VAPA-205ENST00000578314 UBE2L6O14933 153 aa14.95□□□□□ -0.02
VAPA-205ENST00000578314 NCR2O95944 276 aa14.95□□□□□ -0.02
VAPA-205ENST00000578314 TMEM241Q24JQ0 296 aa14.95□□□□□ -0.02
VAPA-205ENST00000578314 C9JQL5 133 aa14.94□□□□□ -0.02
VAPA-205ENST00000578314 TMEM191AQ9H0A3 160 aa14.94□□□□□ -0.02
VAPA-205ENST00000578314 V9GYV3 84 aa14.94□□□□□ -0.02
VAPA-205ENST00000578314 MYCBP2O75592 4640 aa14.94□□□□□ -0.02
VAPA-205ENST00000578314 TRBV6-5A0A0K0K1A5 114 aa14.93□□□□□ -0.02
VAPA-205ENST00000578314 SDHAF1A6NFY7 115 aa14.93□□□□□ -0.02
VAPA-205ENST00000578314 PRSS1P07477 247 aa14.93□□□□□ -0.02
VAPA-205ENST00000578314 ISOC2Q96AB3 205 aa14.93□□□□□ -0.02
VAPA-205ENST00000578314 IGLV10-54A0A075B6I4 117 aa14.92□□□□□ -0.02
VAPA-205ENST00000578314 RPL23P62829 140 aaKnown RBP14.92□□□□□ -0.02
VAPA-205ENST00000578314 DGAT2L7PQ6IED9 249 aa14.91□□□□□ -0.02
VAPA-205ENST00000578314 SMDT1Q9H4I9 107 aa14.91□□□□□ -0.02
VAPA-205ENST00000578314 DMBT1Q9UGM3 2413 aaPredicted RBP14.91□□□□□ -0.02
VAPA-205ENST00000578314 H7C423 109 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 GAS8-AS1O95177 125 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 SRSF3P84103 164 aaKnown RBP14.9□□□□□ -0.02
VAPA-205ENST00000578314 PEA15Q15121 130 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 RNF185Q96GF1 192 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 CHAC1Q9BUX1 264 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 NAT8Q9UHE5 227 aa14.9□□□□□ -0.02
VAPA-205ENST00000578314 I3L3M4 83 aa14.89□□□□□ -0.03
VAPA-205ENST00000578314 RAB4AP20338 218 aa14.89□□□□□ -0.03
VAPA-205ENST00000578314 SCXQ7RTU7 201 aa14.89□□□□□ -0.03
VAPA-205ENST00000578314 CLRN3Q8NCR9 226 aa14.89□□□□□ -0.03
VAPA-205ENST00000578314 NUP35Q8NFH5 326 aa14.89□□□□□ -0.03
VAPA-205ENST00000578314 APCSP02743 223 aa14.88□□□□□ -0.03
VAPA-205ENST00000578314 PMCHP20382 165 aa14.87□□□□□ -0.03
VAPA-205ENST00000578314 RIGQ13278 110 aa14.87□□□□□ -0.03
VAPA-205ENST00000578314 MRAP2Q96G30 205 aa14.87□□□□□ -0.03
VAPA-205ENST00000578314 ST20Q9HBF5 79 aa14.87□□□□□ -0.03
VAPA-205ENST00000578314 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.86□□□□□ -0.03
VAPA-205ENST00000578314 IGKV2-29A2NJV5 120 aaPredicted RBP14.86□□□□□ -0.03
VAPA-205ENST00000578314 ADIRFQ15847 76 aa14.86□□□□□ -0.03
VAPA-205ENST00000578314 AMMECR1LQ6DCA0 310 aa14.86□□□□□ -0.03
VAPA-205ENST00000578314 C9orf163Q8N9P6 203 aa14.86□□□□□ -0.03
VAPA-205ENST00000578314 NAT8BQ9UHF3 227 aa14.86□□□□□ -0.03
VAPA-205ENST00000578314 POLR2KP53803 58 aaKnown RBP14.85□□□□□ -0.03
VAPA-205ENST00000578314 AMN1Q8IY45 258 aa14.85□□□□□ -0.03
VAPA-205ENST00000578314 LINC00528Q8N1L1 170 aa14.85□□□□□ -0.03
VAPA-205ENST00000578314 CIRBP-AS1Q8TBR5 109 aa14.85□□□□□ -0.03
VAPA-205ENST00000578314 TSHBP01222 138 aa14.84□□□□□ -0.03
VAPA-205ENST00000578314 FGF6P10767 208 aa14.84□□□□□ -0.03
VAPA-205ENST00000578314 ESDP10768 282 aa14.84□□□□□ -0.03
VAPA-205ENST00000578314 RPS10P46783 165 aaKnown RBP14.84□□□□□ -0.03
VAPA-205ENST00000578314 FLG2Q5D862 2391 aaPredicted RBP14.83□□□□□ -0.03
VAPA-205ENST00000578314 TRBV27A0A0K0K1C4 114 aa14.83□□□□□ -0.04
VAPA-205ENST00000578314 SMIM27A0A1W2PRY6 76 aa14.83□□□□□ -0.04
VAPA-205ENST00000578314 PLA2G1BP04054 148 aaKnown RBP14.83□□□□□ -0.04
VAPA-205ENST00000578314 RNASEKQ6P5S7 137 aaKnown RBP14.83□□□□□ -0.04
VAPA-205ENST00000578314 ZNF25P17030 456 aaPredicted RBP14.82□□□□□ -0.04
VAPA-205ENST00000578314 CNBPP62633 177 aaKnown RBP14.82□□□□□ -0.04
VAPA-205ENST00000578314 hDV102S1A0JD36 115 aa14.8□□□□□ -0.04
VAPA-205ENST00000578314 GAGE12HA6NDE8 117 aa14.8□□□□□ -0.04
VAPA-205ENST00000578314 PPP1R17O96001 155 aa14.8□□□□□ -0.04
VAPA-205ENST00000578314 TMEM242Q9NWH2 141 aa14.8□□□□□ -0.04
VAPA-205ENST00000578314 IGKV3OR2-268A0A0C4DH90 116 aa14.79□□□□□ -0.04
VAPA-205ENST00000578314 SDIM1Q6ZPB5 146 aa14.79□□□□□ -0.04
VAPA-205ENST00000578314 NRACQ8N912 160 aa14.79□□□□□ -0.04
VAPA-205ENST00000578314 A0A1B0GW15 77 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 SMKR1H3BMG3 65 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 VCYO14598 125 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 FAM104BQ5XKR9 115 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 CHCHD10Q8WYQ3 142 aaPredicted RBP14.78□□□□□ -0.04
VAPA-205ENST00000578314 TMEM101Q96IK0 257 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 BTF3L4Q96K17 158 aa14.78□□□□□ -0.04
VAPA-205ENST00000578314 SLPIP03973 132 aa14.77□□□□□ -0.05
VAPA-205ENST00000578314 CFAP161Q6P656 301 aa14.77□□□□□ -0.05
VAPA-205ENST00000578314 MRPL52Q86TS9 123 aaKnown RBP14.77□□□□□ -0.05
VAPA-205ENST00000578314 OR5A1Q8NGJ0 315 aa14.77□□□□□ -0.05
VAPA-205ENST00000578314 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
VAPA-205ENST00000578314 CAMPP49913 170 aa14.75□□□□□ -0.05
VAPA-205ENST00000578314 SUMO2P61956 95 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms