RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 UFSP1Q6NVU6 142 aa13.46□□□□□ -0.26
ATPAF1-214ENST00000576409 TMEM61Q8N0U2 210 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 IGKV3D-7A0A0C4DH55 119 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 FAM236AA0A1B0GUQ0 79 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 FAM236BA0A1B0GV22 79 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 A0A0J9YX75 114 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 HAMPP81172 84 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 IGF2-ASQ6U949 168 aa13.45□□□□□ -0.26
ATPAF1-214ENST00000576409 SOCS3O14543 225 aa13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 ELANEP08246 267 aa13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 Q96MF0 132 aa13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 SLC25A29Q8N8R3 303 aa13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 Q9HAA7 133 aa13.44□□□□□ -0.26
ATPAF1-214ENST00000576409 A0A0J9YXY3 114 aa13.43□□□□□ -0.26
ATPAF1-214ENST00000576409 SS18Q15532 418 aa13.43□□□□□ -0.26
ATPAF1-214ENST00000576409 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
ATPAF1-214ENST00000576409 C19orf84I3L1E1 186 aa13.43□□□□□ -0.26
ATPAF1-214ENST00000576409 H3BUA1 57 aa13.42□□□□□ -0.26
ATPAF1-214ENST00000576409 LGALS9O00182 355 aa13.42□□□□□ -0.26
ATPAF1-214ENST00000576409 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
ATPAF1-214ENST00000576409 SRSF2Q01130 221 aaKnown RBP13.42□□□□□ -0.26
ATPAF1-214ENST00000576409 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
ATPAF1-214ENST00000576409 SPANXA1Q9NS26 97 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 VPREB3Q9UKI3 123 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 ZNF22P17026 224 aaPredicted RBP13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 EDN2P20800 178 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 NFE4Q86UQ8 179 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 TRBV10-2A0A0K0K1G8 114 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 NBL1P41271 181 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 C10orf105Q8TEF2 133 aa13.41□□□□□ -0.26
ATPAF1-214ENST00000576409 GATA3P23771 443 aa13.4□□□□□ -0.26
ATPAF1-214ENST00000576409 SND1-IT1Q9HBX3 110 aa13.4□□□□□ -0.26
ATPAF1-214ENST00000576409 F8W735 103 aaPredicted RBP13.4□□□□□ -0.26
ATPAF1-214ENST00000576409 XGP55808 180 aa13.4□□□□□ -0.26
ATPAF1-214ENST00000576409 IGHV1-58A0A0C4DH39 117 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 CLPSL1A2RUU4 121 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 TNFRSF13BO14836 293 aaPredicted RBP13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 MRGPRG-AS1Q2M3A8 158 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 PIFOQ8TCI5 191 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 VSIG2Q96IQ7 327 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 TRBV7-3A0A075B6L6 115 aa13.39□□□□□ -0.27
ATPAF1-214ENST00000576409 FBXL19-AS1Q494R0 122 aa13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 IGHG4P01861 327 aa13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 GPHB5Q86YW7 130 aa13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 F5H768 121 aa13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 ANGP03950 147 aaKnown RBP13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 EBI3Q14213 229 aa13.38□□□□□ -0.27
ATPAF1-214ENST00000576409 IGLV4-3A0A075B6K6 122 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 IGHV3-33P01772 117 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 MUC4Q99102 2169 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 TRIAP1O43715 76 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 ATP5G1P05496 136 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 TRAV13-2A0A0B4J235 113 aa13.37□□□□□ -0.27
ATPAF1-214ENST00000576409 CFAP126Q5VTH2 177 aa13.36□□□□□ -0.27
ATPAF1-214ENST00000576409 TRAV4A0A0B4J268 109 aa13.36□□□□□ -0.27
ATPAF1-214ENST00000576409 M0QY20 66 aa13.36□□□□□ -0.27
ATPAF1-214ENST00000576409 MED14OSP0DP75 135 aa13.36□□□□□ -0.27
ATPAF1-214ENST00000576409 MRPL23Q16540 153 aaKnown RBP13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 K7EMT4 169 aa13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 MIR7-3HGQ8N6C7 128 aa13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 LINC00467Q9BRT7 94 aa13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 CRLF1O75462 422 aa13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 ANKRD17O75179 2603 aaKnown RBP13.35□□□□□ -0.27
ATPAF1-214ENST00000576409 Q8N6K4 173 aa13.34□□□□□ -0.27
ATPAF1-214ENST00000576409 ATP6V0E2Q8NHE4 81 aa13.34□□□□□ -0.27
ATPAF1-214ENST00000576409 A6NDX4 124 aa13.34□□□□□ -0.27
ATPAF1-214ENST00000576409 LECT2O14960 151 aa13.34□□□□□ -0.27
ATPAF1-214ENST00000576409 USP24Q9UPU5 2620 aa13.33□□□□□ -0.27
ATPAF1-214ENST00000576409 IGHV4-4A0A075B6R2 117 aa13.33□□□□□ -0.27
ATPAF1-214ENST00000576409 CNFNQ9BYD5 112 aa13.33□□□□□ -0.27
ATPAF1-214ENST00000576409 CCL24O00175 119 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 IGHV3-30P01768 117 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 IGHV3-30-5P0DP03 117 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 ZNF580Q9UK33 172 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 Q6ZSV7 163 aa13.33□□□□□ -0.28
ATPAF1-214ENST00000576409 CRIP2P52943 208 aaPredicted RBP13.32□□□□□ -0.28
ATPAF1-214ENST00000576409 DEFB4AO15263 64 aa13.32□□□□□ -0.28
ATPAF1-214ENST00000576409 NDUFV3P56181 108 aaKnown RBP13.32□□□□□ -0.28
ATPAF1-214ENST00000576409 HIST2H2BCQ6DN03 193 aa13.32□□□□□ -0.28
ATPAF1-214ENST00000576409 OVOL2Q9BRP0 275 aa13.32□□□□□ -0.28
ATPAF1-214ENST00000576409 COL6A3P12111 3177 aa13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 TMEM223A0PJW6 202 aa13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 Q6ZTI0 123 aa13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 RAI1Q7Z5J4 1906 aaPredicted RBP13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 K7EQG2 157 aa13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 POLR2KP53803 58 aaKnown RBP13.31□□□□□ -0.28
ATPAF1-214ENST00000576409 UBL5Q9BZL1 73 aa13.3□□□□□ -0.28
ATPAF1-214ENST00000576409 MIAQ16674 131 aa13.3□□□□□ -0.28
ATPAF1-214ENST00000576409 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
ATPAF1-214ENST00000576409 A0A1W2PPR1 153 aa13.29□□□□□ -0.28
ATPAF1-214ENST00000576409 F8P00451 2351 aa13.29□□□□□ -0.28
ATPAF1-214ENST00000576409 H3BT86 120 aa13.29□□□□□ -0.28
ATPAF1-214ENST00000576409 TRBV27A0A0K0K1C4 114 aa13.29□□□□□ -0.28
ATPAF1-214ENST00000576409 A0A1B0GX51 115 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms