RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 Q6ZRP5 223 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 KRTAP9-2Q9BYQ4 174 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 MAP1LC3BQ9GZQ8 125 aa6.15□□□□□ -1.42
CALCOCO2-227ENST00000575560 AKR1C8PQ5T2L2 129 aa6.14□□□□□ -1.43
CALCOCO2-227ENST00000575560 RASL11AQ6T310 242 aa6.14□□□□□ -1.43
CALCOCO2-227ENST00000575560 BAGE2Q86Y30 109 aa6.14□□□□□ -1.43
CALCOCO2-227ENST00000575560 STOML3Q8TAV4 291 aa6.14□□□□□ -1.43
CALCOCO2-227ENST00000575560 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
CALCOCO2-227ENST00000575560 UBE2L6O14933 153 aa6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 PAGE4O60829 102 aa6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 MGPP08493 103 aa6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 IGLC6P0CF74 106 aa6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 CHCHD10Q8WYQ3 142 aaPredicted RBP6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 ALG5Q9Y673 324 aa6.13□□□□□ -1.43
CALCOCO2-227ENST00000575560 SCO2A0A1W2PP80 73 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 FAM231BA6NCW3 169 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 AMTP48728 403 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 DEFA1P59665 94 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 FOXI1Q12951 378 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 MED28Q9H204 178 aa6.12□□□□□ -1.43
CALCOCO2-227ENST00000575560 IGKV3OR2-268A0A0C4DH90 116 aa6.11□□□□□ -1.43
CALCOCO2-227ENST00000575560 H2AFB1P0C5Y9 115 aa6.11□□□□□ -1.43
CALCOCO2-227ENST00000575560 COTL1Q14019 142 aa6.11□□□□□ -1.43
CALCOCO2-227ENST00000575560 TMUB2Q71RG4 321 aa6.11□□□□□ -1.43
CALCOCO2-227ENST00000575560 CACNG7P62955 275 aa6.1□□□□□ -1.43
CALCOCO2-227ENST00000575560 FER1L6-AS1Q8NA97 138 aa6.1□□□□□ -1.43
CALCOCO2-227ENST00000575560 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
CALCOCO2-227ENST00000575560 CYTL1Q9NRR1 136 aa6.1□□□□□ -1.43
CALCOCO2-227ENST00000575560 PKIGQ9Y2B9 76 aa6.1□□□□□ -1.43
CALCOCO2-227ENST00000575560 FAT4Q6V0I7 4981 aa6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 GIPP09681 153 aaPredicted RBP6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 ZNF664Q8N3J9 261 aa6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 MBD3L1Q8WWY6 194 aa6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 LINC00526Q96FQ7 95 aa6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 PSORS1C2Q9UIG4 136 aa6.09□□□□□ -1.43
CALCOCO2-227ENST00000575560 FXYD6-FXYD2A0A087WZ82 144 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 A0A1W2PNN7 141 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 C19orf71A6NCJ1 209 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 F2Z2F3 143 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 H7C423 109 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 NTF3P20783 257 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 RPL35P42766 123 aaKnown RBP6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 SFT2D1Q8WV19 159 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 CARD19Q96LW7 228 aa6.08□□□□□ -1.44
CALCOCO2-227ENST00000575560 IGHV1-58A0A0C4DH39 117 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 PFDN1O60925 122 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 TRGC1P0CF51 173 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 XCL1P47992 114 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 AMMECR1LQ6DCA0 310 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 LYZL1Q6UWQ5 148 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 Q6ZNX1 250 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 GATD1Q8NB37 220 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 OR2D3Q8NGH3 330 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 OR5A1Q8NGJ0 315 aa6.07□□□□□ -1.44
CALCOCO2-227ENST00000575560 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 LINC00959A0A1B0GUT2 108 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 G3V3Q6 166 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 CCL25O15444 150 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 NCR2O95944 276 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 FGF6P10767 208 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 SYCNQ0VAF6 134 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 RNASEKQ6P5S7 137 aaKnown RBP6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 C9orf62Q8N4C0 152 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 PRR26Q8N8Z3 221 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 KRTAP4-6Q9BYQ5 205 aa6.06□□□□□ -1.44
CALCOCO2-227ENST00000575560 LOC107984640A0A0U1RRK4 108 aa6.05□□□□□ -1.44
CALCOCO2-227ENST00000575560 A0A1B0GV50 99 aa6.05□□□□□ -1.44
CALCOCO2-227ENST00000575560 ZNF25P17030 456 aaPredicted RBP6.05□□□□□ -1.44
CALCOCO2-227ENST00000575560 KCNRGQ8N5I3 272 aa6.05□□□□□ -1.44
CALCOCO2-227ENST00000575560 C11orf52Q96A22 123 aa6.05□□□□□ -1.44
CALCOCO2-227ENST00000575560 TRAV26-2A0A0B4J265 109 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 XKRY2A2RUG3 117 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 UMAD1C9J7I0 102 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 ZNF561-AS1K7EIQ3 104 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 IFNA1P01562 189 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 MT-ND6P03923 174 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 GAGE2BQ13066 116 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 CENPWQ5EE01 88 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 CD164L2Q6UWJ8 174 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 FAM213BQ8TBF2 198 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
CALCOCO2-227ENST00000575560 A0A0U1RQV1 116 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 KRTAP9-6A0A140TA67 174 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 APCSP02743 223 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 CTRLP40313 264 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 CAMPP49913 170 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 TWIST1Q15672 202 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 C9orf116Q5BN46 136 aaPredicted RBP6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 NUP35Q8NFH5 326 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 RPL39LQ96EH5 51 aaKnown RBP6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 SMIM12Q96EX1 92 aa6.03□□□□□ -1.44
CALCOCO2-227ENST00000575560 IGLV4-69A0A075B6H9 119 aa6.02□□□□□ -1.45
CALCOCO2-227ENST00000575560 RAB19A4D1S5 217 aa6.02□□□□□ -1.45
CALCOCO2-227ENST00000575560 SDHAF1A6NFY7 115 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms