RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 OSTCQ9NRP0 149 aa8.34□□□□□ -1.07
NPLOC4-213ENST00000573519 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 ADIRFQ15847 76 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 MIAQ16674 131 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 IQCJQ1A5X6 159 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 FAM74A3Q4VXF1 159 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 SMIM15Q7Z3B0 74 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 LINC00269Q8N2A0 174 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 ISOC2Q96AB3 205 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 V9GYV3 84 aa8.33□□□□□ -1.08
NPLOC4-213ENST00000573519 UBE2L6O14933 153 aa8.32□□□□□ -1.08
NPLOC4-213ENST00000573519 C14orf177Q52M58 125 aa8.32□□□□□ -1.08
NPLOC4-213ENST00000573519 RPL39LQ96EH5 51 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-213ENST00000573519 TMEM243Q9BU79 118 aa8.32□□□□□ -1.08
NPLOC4-213ENST00000573519 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
NPLOC4-213ENST00000573519 USP17L23D6RBM5 183 aa8.31□□□□□ -1.08
NPLOC4-213ENST00000573519 BORCS7Q96B45 105 aa8.31□□□□□ -1.08
NPLOC4-213ENST00000573519 GFRA4Q9GZZ7 299 aa8.31□□□□□ -1.08
NPLOC4-213ENST00000573519 NAT8Q9UHE5 227 aa8.31□□□□□ -1.08
NPLOC4-213ENST00000573519 IGLV10-54A0A075B6I4 117 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 GAS8-AS1O95177 125 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 AMTP48728 403 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 REG3AQ06141 175 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 COTL1Q14019 142 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 Q6ZSA8 131 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 NUP35Q8NFH5 326 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 PRR34Q9NV39 138 aa8.3□□□□□ -1.08
NPLOC4-213ENST00000573519 SMDT1Q9H4I9 107 aa8.29□□□□□ -1.08
NPLOC4-213ENST00000573519 FAT1Q14517 4588 aa8.29□□□□□ -1.08
NPLOC4-213ENST00000573519 DNAH8Q96JB1 4490 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 IGLV4-60A0A075B6I1 120 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 FAM231BA6NCW3 169 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 SCXQ7RTU7 201 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 LINC00528Q8N1L1 170 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
NPLOC4-213ENST00000573519 PLA2G1BP04054 148 aaKnown RBP8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 RAB14P61106 215 aa8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 RIGQ13278 110 aa8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 AMN1Q8IY45 258 aa8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 TMEM191AQ9H0A3 160 aa8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
NPLOC4-213ENST00000573519 IGKV3OR2-268A0A0C4DH90 116 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 A0A1B0GUV1 79 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 SMIM27A0A1W2PRY6 76 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 SMKR1H3BMG3 65 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 PRSS1P07477 247 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 RAB4AP20338 218 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 CHAC1Q9BUX1 264 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 NAT8BQ9UHF3 227 aa8.26□□□□□ -1.09
NPLOC4-213ENST00000573519 TRAV8-4A0A0B4J246 113 aa8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 NCR2O95944 276 aa8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 APCSP02743 223 aa8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 RPS10P46783 165 aaKnown RBP8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 AMMECR1LQ6DCA0 310 aa8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 KRTAP26-1Q6PEX3 210 aa8.25□□□□□ -1.09
NPLOC4-213ENST00000573519 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 PMCHP20382 165 aa8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 CAMPP49913 170 aa8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 RNASEKQ6P5S7 137 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 CIRBP-AS1Q8TBR5 109 aa8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 ST20Q9HBF5 79 aa8.24□□□□□ -1.09
NPLOC4-213ENST00000573519 TRBV6-5A0A0K0K1A5 114 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 hDV102S1A0JD36 115 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 IFITM2Q01629 132 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 DGAT2L7PQ6IED9 249 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 CLRN3Q8NCR9 226 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 MRAP2Q96G30 205 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 TMEM242Q9NWH2 141 aa8.23□□□□□ -1.09
NPLOC4-213ENST00000573519 I3L3M4 83 aa8.22□□□□□ -1.09
NPLOC4-213ENST00000573519 CLLU1Q5K131 121 aa8.22□□□□□ -1.09
NPLOC4-213ENST00000573519 MRPL54Q6P161 138 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-213ENST00000573519 SRRM2Q9UQ35 2752 aaKnown RBP8.22□□□□□ -1.09
NPLOC4-213ENST00000573519 GAGE12HA6NDE8 117 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 TSHBP01222 138 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 FGF6P10767 208 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 POLR2KP53803 58 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 MRPL51Q4U2R6 128 aaKnown RBP8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 FAM104BQ5XKR9 115 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 NRACQ8N912 160 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 C9orf163Q8N9P6 203 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 AP5S1Q9NUS5 200 aa8.21□□□□□ -1.1
NPLOC4-213ENST00000573519 H7C423 109 aa8.2□□□□□ -1.1
NPLOC4-213ENST00000573519 BTF3L4Q96K17 158 aa8.2□□□□□ -1.1
NPLOC4-213ENST00000573519 A0A1B0GXF2 115 aa8.19□□□□□ -1.1
NPLOC4-213ENST00000573519 HBBP68871 147 aa8.19□□□□□ -1.1
NPLOC4-213ENST00000573519 TMEM101Q96IK0 257 aa8.19□□□□□ -1.1
NPLOC4-213ENST00000573519 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 TRBV27A0A0K0K1C4 114 aa8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 A0A1B0GW15 77 aa8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 J3QL48 77 aa8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 PPP1R2P9O14990 202 aa8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 ESDP10768 282 aa8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 CHCHD10Q8WYQ3 142 aaPredicted RBP8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
NPLOC4-213ENST00000573519 IGHV3-64A0A075B6Q5 118 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 VCYO14598 125 aa8.17□□□□□ -1.1
NPLOC4-213ENST00000573519 PPP1R17O96001 155 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms