RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 GATD1Q8NB37 220 aa8.93□□□□□ -0.98
RAB40B-204ENST00000571554 CIRBP-AS1Q8TBR5 109 aa8.93□□□□□ -0.98
RAB40B-204ENST00000571554 GATCO43716 136 aaKnown RBP8.92□□□□□ -0.98
RAB40B-204ENST00000571554 PLA2G1BP04054 148 aaKnown RBP8.92□□□□□ -0.98
RAB40B-204ENST00000571554 AMTP48728 403 aa8.92□□□□□ -0.98
RAB40B-204ENST00000571554 RPL39LQ96EH5 51 aaKnown RBP8.92□□□□□ -0.98
RAB40B-204ENST00000571554 PGLYRP4Q96LB8 373 aa8.92□□□□□ -0.98
RAB40B-204ENST00000571554 CHAC1Q9BUX1 264 aa8.92□□□□□ -0.98
RAB40B-204ENST00000571554 UBE2L6O14933 153 aa8.91□□□□□ -0.98
RAB40B-204ENST00000571554 COTL1Q14019 142 aa8.91□□□□□ -0.98
RAB40B-204ENST00000571554 WDR73Q6P4I2 378 aa8.91□□□□□ -0.98
RAB40B-204ENST00000571554 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
RAB40B-204ENST00000571554 IGKV3OR2-268A0A0C4DH90 116 aa8.9□□□□□ -0.98
RAB40B-204ENST00000571554 TMEM250H0YL14 139 aa8.9□□□□□ -0.98
RAB40B-204ENST00000571554 LYPD6BQ8NI32 183 aa8.9□□□□□ -0.98
RAB40B-204ENST00000571554 EIF5A2Q9GZV4 153 aaKnown RBP8.9□□□□□ -0.98
RAB40B-204ENST00000571554 A0A1B0GVG6 124 aa8.89□□□□□ -0.99
RAB40B-204ENST00000571554 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.88□□□□□ -0.99
RAB40B-204ENST00000571554 IGKV2-29A2NJV5 120 aaPredicted RBP8.88□□□□□ -0.99
RAB40B-204ENST00000571554 SMIM15Q7Z3B0 74 aa8.88□□□□□ -0.99
RAB40B-204ENST00000571554 SMIM7Q9BQ49 75 aa8.88□□□□□ -0.99
RAB40B-204ENST00000571554 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 hDV102S1A0JD36 115 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 A8MWL6 223 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 J3QL48 77 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 GAS8-AS1O95177 125 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 FAM231DQ6ZW35 169 aa8.87□□□□□ -0.99
RAB40B-204ENST00000571554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.87□□□□□ -0.99
RAB40B-204ENST00000571554 PANO1I0J062 215 aa8.86□□□□□ -0.99
RAB40B-204ENST00000571554 DGAT2L7PQ6IED9 249 aa8.86□□□□□ -0.99
RAB40B-204ENST00000571554 LINC01551Q86U37 167 aa8.86□□□□□ -0.99
RAB40B-204ENST00000571554 C9orf163Q8N9P6 203 aa8.86□□□□□ -0.99
RAB40B-204ENST00000571554 TRAV8-4A0A0B4J246 113 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 GAGE12HA6NDE8 117 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 SDHAF1A6NFY7 115 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 ZNF727A8MUV8 499 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 APCSP02743 223 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 SRP19P09132 144 aaKnown RBP8.85□□□□□ -0.99
RAB40B-204ENST00000571554 KRTAP10-4P60372 401 aaPredicted RBP8.85□□□□□ -0.99
RAB40B-204ENST00000571554 AMMECR1LQ6DCA0 310 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 RNASEKQ6P5S7 137 aaKnown RBP8.85□□□□□ -0.99
RAB40B-204ENST00000571554 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 FAM210AQ96ND0 272 aa8.85□□□□□ -0.99
RAB40B-204ENST00000571554 HIGD1CA8MV81 97 aa8.84□□□□□ -0.99
RAB40B-204ENST00000571554 SLPIP03973 132 aa8.83□□□□□ -1
RAB40B-204ENST00000571554 PMCHP20382 165 aa8.83□□□□□ -1
RAB40B-204ENST00000571554 CT83Q5H943 113 aa8.83□□□□□ -1
RAB40B-204ENST00000571554 CLRN3Q8NCR9 226 aa8.83□□□□□ -1
RAB40B-204ENST00000571554 TSKUQ8WUA8 353 aa8.83□□□□□ -1
RAB40B-204ENST00000571554 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 A0A1B0GUT8 65 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 NCR2O95944 276 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 FGF6P10767 208 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 RPS10P46783 165 aaKnown RBP8.82□□□□□ -1
RAB40B-204ENST00000571554 HIGD2BQ4VC39 106 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 SDIM1Q6ZPB5 146 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 C15orf56Q8N910 161 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 AP5S1Q9NUS5 200 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 TMEM242Q9NWH2 141 aa8.82□□□□□ -1
RAB40B-204ENST00000571554 LRP1Q07954 4544 aaKnown RBP8.81□□□□□ -1
RAB40B-204ENST00000571554 FAM231BA6NCW3 169 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 SMKR1H3BMG3 65 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 I3L3M4 83 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 CHTF8P0CG12 524 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 RPL37AP61513 92 aaKnown RBP8.81□□□□□ -1
RAB40B-204ENST00000571554 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
RAB40B-204ENST00000571554 TEX261Q6UWH6 196 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 AMN1Q8IY45 258 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 CHCHD10Q8WYQ3 142 aaPredicted RBP8.81□□□□□ -1
RAB40B-204ENST00000571554 RNF185Q96GF1 192 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 OSTCQ9NRP0 149 aa8.81□□□□□ -1
RAB40B-204ENST00000571554 C9JQL5 133 aa8.8□□□□□ -1
RAB40B-204ENST00000571554 TSHBP01222 138 aa8.8□□□□□ -1
RAB40B-204ENST00000571554 TMEM191AQ9H0A3 160 aa8.8□□□□□ -1
RAB40B-204ENST00000571554 ST20Q9HBF5 79 aa8.8□□□□□ -1
RAB40B-204ENST00000571554 V9GYV3 84 aa8.8□□□□□ -1
RAB40B-204ENST00000571554 IGHV3-64A0A075B6Q5 118 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 TRBV6-5A0A0K0K1A5 114 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 KRTAP29-1A8MX34 341 aaPredicted RBP8.79□□□□□ -1
RAB40B-204ENST00000571554 RAB4AP20338 218 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 HNRNPA3P51991 378 aaKnown RBP8.79□□□□□ -1
RAB40B-204ENST00000571554 SRSF3P84103 164 aaKnown RBP8.79□□□□□ -1
RAB40B-204ENST00000571554 ADIRFQ15847 76 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 NUP35Q8NFH5 326 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 ISOC2Q96AB3 205 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 FAT3Q8TDW7 4589 aa8.79□□□□□ -1
RAB40B-204ENST00000571554 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.78□□□□□ -1
RAB40B-204ENST00000571554 XCL1P47992 114 aa8.78□□□□□ -1
RAB40B-204ENST00000571554 RPL23P62829 140 aaKnown RBP8.78□□□□□ -1
RAB40B-204ENST00000571554 TMEM241Q24JQ0 296 aa8.78□□□□□ -1
RAB40B-204ENST00000571554 DPH3Q96FX2 82 aa8.78□□□□□ -1
RAB40B-204ENST00000571554 H7C423 109 aa8.77□□□□□ -1.01
RAB40B-204ENST00000571554 NDUFS6O75380 124 aaKnown RBP8.77□□□□□ -1.01
RAB40B-204ENST00000571554 ESDP10768 282 aa8.77□□□□□ -1.01
RAB40B-204ENST00000571554 MRAP2Q96G30 205 aa8.77□□□□□ -1.01
RAB40B-204ENST00000571554 TMEM101Q96IK0 257 aa8.77□□□□□ -1.01
RAB40B-204ENST00000571554 BTF3L4Q96K17 158 aa8.77□□□□□ -1.01
RAB40B-204ENST00000571554 ZNF25P17030 456 aaPredicted RBP8.76□□□□□ -1.01
RAB40B-204ENST00000571554 POLR2KP53803 58 aaKnown RBP8.76□□□□□ -1.01
RAB40B-204ENST00000571554 FOXI1Q12951 378 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms