RNA–Protein interactions for RNA: ENST00000570086.5

CMC2-222, Transcript of C-X9-C motif containing 2, human

TSL 3

Gene CMC2, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC2-222	ENST00000570086	ORMDL2	Q53FV1	153 aa		10.91	□□□□□ -0.66
CMC2-222	ENST00000570086	URB1-AS1	Q96HZ7	61 aa		10.91	□□□□□ -0.66
CMC2-222	ENST00000570086	LAGE3	Q14657	143 aa		10.9	□□□□□ -0.66
CMC2-222	ENST00000570086	RNASEK	Q6P5S7	137 aa	Known RBP	10.9	□□□□□ -0.66
CMC2-222	ENST00000570086	TRBV6-8	A0A0A6YYG3	113 aa		10.89	□□□□□ -0.67
CMC2-222	ENST00000570086	SERF1A	O75920	110 aa		10.89	□□□□□ -0.67
CMC2-222	ENST00000570086	G0S2	P27469	103 aa		10.89	□□□□□ -0.67
CMC2-222	ENST00000570086	NDUFA6	P56556	154 aa		10.89	□□□□□ -0.67
CMC2-222	ENST00000570086	TRBV25-1	A0A075B6N4	114 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	IGHV1-24	A0A0C4DH33	117 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	S100A6	P06703	90 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	AMT	P48728	403 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	LINC00310	P59036	64 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	LYPD5	Q6UWN5	251 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	NTM-AS1	Q6ZSK4	140 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	APLN	Q9ULZ1	77 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	TG	P01266	2768 aa		10.88	□□□□□ -0.67
CMC2-222	ENST00000570086	HSBP1	O75506	76 aa		10.87	□□□□□ -0.67
CMC2-222	ENST00000570086	ESD	P10768	282 aa		10.87	□□□□□ -0.67
CMC2-222	ENST00000570086	LELP1	Q5T871	98 aa		10.87	□□□□□ -0.67
CMC2-222	ENST00000570086	LINC01549	A6NIU2	74 aa		10.86	□□□□□ -0.67
CMC2-222	ENST00000570086	DEFB104A	Q8WTQ1	72 aa		10.86	□□□□□ -0.67
CMC2-222	ENST00000570086	TMEM18	Q96B42	140 aa		10.86	□□□□□ -0.67
CMC2-222	ENST00000570086	TMEM243	Q9BU79	118 aa		10.86	□□□□□ -0.67
CMC2-222	ENST00000570086	CHCHD7	Q9BUK0	85 aa		10.86	□□□□□ -0.67
CMC2-222	ENST00000570086		H7C423	109 aa		10.85	□□□□□ -0.67
CMC2-222	ENST00000570086	ESRG	Q1W209	222 aa		10.85	□□□□□ -0.67
CMC2-222	ENST00000570086	ZFAND6	Q6FIF0	208 aa		10.85	□□□□□ -0.67
CMC2-222	ENST00000570086	C20orf203	Q8NBC4	194 aa		10.85	□□□□□ -0.67
CMC2-222	ENST00000570086	C3orf84	H3BNL1	204 aa		10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	NUPR1	O60356	82 aa		10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	HBD	P02042	147 aa		10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	CCL18	P55774	89 aa		10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	CYSLTR1	Q9Y271	337 aa		10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	TMA7	Q9Y2S6	64 aa	Known RBP	10.84	□□□□□ -0.67
CMC2-222	ENST00000570086	TRAV8-6	A0A0B4J262	113 aa		10.83	□□□□□ -0.68
CMC2-222	ENST00000570086	BTF3	P20290	206 aa	Known RBP	10.83	□□□□□ -0.68
CMC2-222	ENST00000570086	PKIA	P61925	76 aa		10.83	□□□□□ -0.68
CMC2-222	ENST00000570086	SMAGP	Q0VAQ4	97 aa		10.83	□□□□□ -0.68
CMC2-222	ENST00000570086	DNAH7	Q8WXX0	4024 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086		A0A096LNJ9	63 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	UBE2L6	O14933	153 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	C2orf66	Q6UXQ4	117 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	TOMM6	Q96B49	74 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	CHCHD5	Q9BSY4	110 aa		10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	MRPS16	Q9Y3D3	137 aa	Known RBP	10.82	□□□□□ -0.68
CMC2-222	ENST00000570086	C5orf52	A6NGY3	159 aa		10.81	□□□□□ -0.68
CMC2-222	ENST00000570086	PMCHL1	Q16048	86 aa		10.81	□□□□□ -0.68
CMC2-222	ENST00000570086	TIMM21	Q9BVV7	248 aa		10.81	□□□□□ -0.68
CMC2-222	ENST00000570086	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	IGKV2-29	A2NJV5	120 aa	Predicted RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	SNRPE	P62304	92 aa	Known RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	RPL39	P62891	51 aa	Known RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	MRPL52	Q86TS9	123 aa	Known RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	FAM19A2	Q8N3H0	131 aa		10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	PACRG	Q96M98	296 aa	Predicted RBP	10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	UPK3B	Q9BT76	320 aa		10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	SPANXA1	Q9NS26	97 aa		10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	LINC00588	Q9Y4M8	146 aa		10.8	□□□□□ -0.68
CMC2-222	ENST00000570086	DYNC2H1	Q8NCM8	4307 aa	Known RBP	10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	NPS	P0C0P6	89 aa		10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	ZNF25	P17030	456 aa	Predicted RBP	10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	PDZD11	Q5EBL8	140 aa		10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	CASC10	Q5T4H9	136 aa		10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	HIST3H2BB	Q8N257	126 aa		10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	PYGO1	Q9Y3Y4	419 aa		10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	CSDC2	Q9Y534	153 aa	Known RBP	10.79	□□□□□ -0.68
CMC2-222	ENST00000570086	FGF6	P10767	208 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086	GAGE6	Q13070	117 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086	AMMECR1L	Q6DCA0	310 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086	ERAS	Q7Z444	233 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086	TIMM17A	Q99595	171 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086	UBE2D4	Q9Y2X8	147 aa		10.78	□□□□□ -0.68
CMC2-222	ENST00000570086		A0A1B0GUV1	79 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	ATP5L	O75964	103 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	LEPROTL1	O95214	131 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	S100A2	P29034	98 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	UBE2DNL	Q8IWF7	75 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	SCGB3A1	Q96QR1	104 aa		10.77	□□□□□ -0.69
CMC2-222	ENST00000570086	IGIP	A6NJ69	53 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086	TMEM262	E9PQX1	116 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086	WFDC10B	Q8IUB3	73 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086	TMEM141	Q96I45	108 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086	TMEM101	Q96IK0	257 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086	HSPB8	Q9UJY1	196 aa		10.76	□□□□□ -0.69
CMC2-222	ENST00000570086		A0A087WX48	190 aa		10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	MRPS36	P82909	103 aa	Known RBP	10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	PAPPA-AS1	Q5QFB9	102 aa		10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	LCE2D	Q5TA82	110 aa	Predicted RBP	10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	DGAT2L7P	Q6IED9	249 aa		10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	OR5A1	Q8NGJ0	315 aa		10.75	□□□□□ -0.69
CMC2-222	ENST00000570086	CSMD3	Q7Z407	3707 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	SIVA1	O15304	175 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	DNAH10OS	P0CZ25	163 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	RBX1	P62877	108 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	MPV17L2	Q567V2	206 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	LINC01556	Q5JQF7	62 aa		10.74	□□□□□ -0.69
CMC2-222	ENST00000570086	FABP4	P15090	132 aa		10.73	□□□□□ -0.69
CMC2-222	ENST00000570086	IFI27L1	Q96BM0	104 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 149.4 ms