RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 BAGE2Q86Y30 109 aa7.29□□□□□ -1.24
GTF3C1-209ENST00000568569 MUC2Q02817 5179 aa7.29□□□□□ -1.24
GTF3C1-209ENST00000568569 CHCHD10Q8WYQ3 142 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-209ENST00000568569 TPPP3Q9BW30 176 aa7.28□□□□□ -1.24
GTF3C1-209ENST00000568569 KRTAP9-2Q9BYQ4 174 aa7.28□□□□□ -1.24
GTF3C1-209ENST00000568569 MED28Q9H204 178 aa7.28□□□□□ -1.24
GTF3C1-209ENST00000568569 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
GTF3C1-209ENST00000568569 PAGE4O60829 102 aa7.27□□□□□ -1.25
GTF3C1-209ENST00000568569 RGS21Q2M5E4 152 aa7.27□□□□□ -1.25
GTF3C1-209ENST00000568569 FER1L6-AS1Q8NA97 138 aa7.27□□□□□ -1.25
GTF3C1-209ENST00000568569 NIT2Q9NQR4 276 aa7.27□□□□□ -1.25
GTF3C1-209ENST00000568569 Q5BKY6 102 aa7.26□□□□□ -1.25
GTF3C1-209ENST00000568569 ZNF664Q8N3J9 261 aa7.26□□□□□ -1.25
GTF3C1-209ENST00000568569 CARD19Q96LW7 228 aa7.26□□□□□ -1.25
GTF3C1-209ENST00000568569 FXYD6-FXYD2A0A087WZ82 144 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 G3V3Q6 166 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 PFDN1O60925 122 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 IGLC6P0CF74 106 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 CACNG7P62955 275 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 FOXI1Q12951 378 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 AMMECR1LQ6DCA0 310 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 PSORS1C2Q9UIG4 136 aa7.25□□□□□ -1.25
GTF3C1-209ENST00000568569 A0A0U1RQV1 116 aa7.24□□□□□ -1.25
GTF3C1-209ENST00000568569 GIPP09681 153 aaPredicted RBP7.24□□□□□ -1.25
GTF3C1-209ENST00000568569 TRGC1P0CF51 173 aa7.24□□□□□ -1.25
GTF3C1-209ENST00000568569 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 XCL1P47992 114 aa7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 PTTG1IPP53801 180 aa7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 RPS20P60866 119 aaKnown RBP7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 RNASEKQ6P5S7 137 aaKnown RBP7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 TMUB2Q71RG4 321 aa7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
GTF3C1-209ENST00000568569 TRAV26-2A0A0B4J265 109 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 F2Z2F3 143 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 SMLR1H3BR10 107 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 H7C423 109 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 NTF3P20783 257 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 RPL35P42766 123 aaKnown RBP7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 OR2D3Q8NGH3 330 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 SFT2D1Q8WV19 159 aa7.22□□□□□ -1.25
GTF3C1-209ENST00000568569 XKRY2A2RUG3 117 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 NCR2O95944 276 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 MT-ND6P03923 174 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 FGF6P10767 208 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 ZNF25P17030 456 aaPredicted RBP7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 SYCNQ0VAF6 134 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 OR5A1Q8NGJ0 315 aa7.21□□□□□ -1.26
GTF3C1-209ENST00000568569 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 A0A1B0GV50 99 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 IGKV2-29A2NJV5 120 aaPredicted RBP7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 CCL25O15444 150 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 APCSP02743 223 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 GAGE2BQ13066 116 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 Q6ZNX1 250 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 PRR26Q8N8Z3 221 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 CYTL1Q9NRR1 136 aa7.2□□□□□ -1.26
GTF3C1-209ENST00000568569 LOC107984640A0A0U1RRK4 108 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 A0A1W2PNN7 141 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 CENPWQ5EE01 88 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 LYZL1Q6UWQ5 148 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 KCNRGQ8N5I3 272 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 FAM213BQ8TBF2 198 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 MBD3L1Q8WWY6 194 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 ISOC2Q96AB3 205 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 BTF3L4Q96K17 158 aa7.19□□□□□ -1.26
GTF3C1-209ENST00000568569 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 C19orf71A6NCJ1 209 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 UMAD1C9J7I0 102 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 IFNA1P01562 189 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 CAMPP49913 170 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 GATD1Q8NB37 220 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 DIRC1Q969H9 104 aa7.18□□□□□ -1.26
GTF3C1-209ENST00000568569 ARPC5O15511 151 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 CTRLP40313 264 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 SS18Q15532 418 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 C9orf62Q8N4C0 152 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 C11orf52Q96A22 123 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 SMIM12Q96EX1 92 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 TMEM101Q96IK0 257 aa7.17□□□□□ -1.26
GTF3C1-209ENST00000568569 APOMO95445 188 aa7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 BCL2P10415 239 aa7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 EIF5AP63241 154 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 TWIST1Q15672 202 aa7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 PRR4Q16378 134 aa7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 EIF5AL1Q6IS14 154 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 RPL39LQ96EH5 51 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 CNFNQ9BYD5 112 aa7.16□□□□□ -1.26
GTF3C1-209ENST00000568569 IGLV4-69A0A075B6H9 119 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 IGLV1-50A0A075B6I6 118 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 KRTAP9-6A0A140TA67 174 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 SDHAF1A6NFY7 115 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 IGLV7-43P04211 117 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 GNG4P50150 75 aa7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-209ENST00000568569 H0Y9J4 135 aa7.14□□□□□ -1.27
GTF3C1-209ENST00000568569 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms