RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 VPS13BQ7Z7G8 4022 aa16.65■□□□□ 0.26
FANCA-228ENST00000567943 LECT2O14960 151 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 GCSHP23434 173 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 COTL1Q14019 142 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 ENHOQ6UWT2 76 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 TMEM243Q9BU79 118 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 TMEM191AQ9H0A3 160 aa16.64■□□□□ 0.25
FANCA-228ENST00000567943 RIGQ13278 110 aa16.63■□□□□ 0.25
FANCA-228ENST00000567943 BAALCQ8WXS3 180 aa16.63■□□□□ 0.25
FANCA-228ENST00000567943 NAT8BQ9UHF3 227 aa16.63■□□□□ 0.25
FANCA-228ENST00000567943 IGLV5-52A0A0A0MRZ9 124 aa16.62■□□□□ 0.25
FANCA-228ENST00000567943 NTN5Q8WTR8 489 aaPredicted RBP16.62■□□□□ 0.25
FANCA-228ENST00000567943 AMTP48728 403 aa16.61■□□□□ 0.25
FANCA-228ENST00000567943 C1orf43Q9BWL3 253 aa16.61■□□□□ 0.25
FANCA-228ENST00000567943 SMIM27A0A1W2PRY6 76 aa16.6■□□□□ 0.25
FANCA-228ENST00000567943 CLPSL2Q6UWE3 100 aa16.6■□□□□ 0.25
FANCA-228ENST00000567943 AMN1Q8IY45 258 aa16.6■□□□□ 0.25
FANCA-228ENST00000567943 RNF185Q96GF1 192 aa16.6■□□□□ 0.25
FANCA-228ENST00000567943 SDHAF1A6NFY7 115 aa16.59■□□□□ 0.25
FANCA-228ENST00000567943 GAS8-AS1O95177 125 aa16.59■□□□□ 0.25
FANCA-228ENST00000567943 LINC00269Q8N2A0 174 aa16.59■□□□□ 0.25
FANCA-228ENST00000567943 UBE2L6O14933 153 aa16.58■□□□□ 0.24
FANCA-228ENST00000567943 RAB4AP20338 218 aa16.58■□□□□ 0.24
FANCA-228ENST00000567943 MIAQ16674 131 aa16.57■□□□□ 0.24
FANCA-228ENST00000567943 CLLU1Q5K131 121 aa16.57■□□□□ 0.24
FANCA-228ENST00000567943 PRR34Q9NV39 138 aa16.57■□□□□ 0.24
FANCA-228ENST00000567943 TRBV6-5A0A0K0K1A5 114 aa16.56■□□□□ 0.24
FANCA-228ENST00000567943 C20orf203Q8NBC4 194 aa16.56■□□□□ 0.24
FANCA-228ENST00000567943 MRAP2Q96G30 205 aa16.56■□□□□ 0.24
FANCA-228ENST00000567943 IGLV4-60A0A075B6I1 120 aa16.55■□□□□ 0.24
FANCA-228ENST00000567943 A0A1B0GUV1 79 aa16.55■□□□□ 0.24
FANCA-228ENST00000567943 ST20Q9HBF5 79 aa16.55■□□□□ 0.24
FANCA-228ENST00000567943 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.54■□□□□ 0.24
FANCA-228ENST00000567943 NCR2O95944 276 aa16.54■□□□□ 0.24
FANCA-228ENST00000567943 PMCHP20382 165 aa16.54■□□□□ 0.24
FANCA-228ENST00000567943 RPS10P46783 165 aaKnown RBP16.54■□□□□ 0.24
FANCA-228ENST00000567943 HAMPP81172 84 aa16.54■□□□□ 0.24
FANCA-228ENST00000567943 I3L3M4 83 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 APCSP02743 223 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 CAMPP49913 170 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 IFITM2Q01629 132 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 REG3AQ06141 175 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 FAM30AQ9NZY2 134 aa16.53■□□□□ 0.24
FANCA-228ENST00000567943 SMKR1H3BMG3 65 aa16.52■□□□□ 0.24
FANCA-228ENST00000567943 TMEM70Q9BUB7 260 aa16.52■□□□□ 0.24
FANCA-228ENST00000567943 HLA-DQA1P01909 254 aa16.51■□□□□ 0.23
FANCA-228ENST00000567943 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.5■□□□□ 0.23
FANCA-228ENST00000567943 A0A1B0GW15 77 aa16.5■□□□□ 0.23
FANCA-228ENST00000567943 IGKV2-29A2NJV5 120 aaPredicted RBP16.5■□□□□ 0.23
FANCA-228ENST00000567943 FAM104BQ5XKR9 115 aa16.5■□□□□ 0.23
FANCA-228ENST00000567943 MRPL54Q6P161 138 aaKnown RBP16.5■□□□□ 0.23
FANCA-228ENST00000567943 TMEM242Q9NWH2 141 aa16.49■□□□□ 0.23
FANCA-228ENST00000567943 IGLV10-54A0A075B6I4 117 aa16.48■□□□□ 0.23
FANCA-228ENST00000567943 EPM2AB3EWF7 344 aa16.48■□□□□ 0.23
FANCA-228ENST00000567943 PPP1R2P9O14990 202 aa16.48■□□□□ 0.23
FANCA-228ENST00000567943 POLR2KP53803 58 aaKnown RBP16.48■□□□□ 0.23
FANCA-228ENST00000567943 PNRC1Q12796 327 aaPredicted RBP16.48■□□□□ 0.23
FANCA-228ENST00000567943 MRPL51Q4U2R6 128 aaKnown RBP16.48■□□□□ 0.23
FANCA-228ENST00000567943 AMMECR1LQ6DCA0 310 aa16.48■□□□□ 0.23
FANCA-228ENST00000567943 TSHBP01222 138 aa16.47■□□□□ 0.23
FANCA-228ENST00000567943 SMR3BP02814 79 aaPredicted RBP16.47■□□□□ 0.23
FANCA-228ENST00000567943 KRTAP26-1Q6PEX3 210 aa16.47■□□□□ 0.23
FANCA-228ENST00000567943 NRACQ8N912 160 aa16.47■□□□□ 0.23
FANCA-228ENST00000567943 SRRM2Q9UQ35 2752 aaKnown RBP16.47■□□□□ 0.23
FANCA-228ENST00000567943 H7C423 109 aa16.46■□□□□ 0.23
FANCA-228ENST00000567943 HBBP68871 147 aa16.46■□□□□ 0.23
FANCA-228ENST00000567943 LINC01620Q4KN68 170 aa16.46■□□□□ 0.23
FANCA-228ENST00000567943 RNASEKQ6P5S7 137 aaKnown RBP16.46■□□□□ 0.23
FANCA-228ENST00000567943 TRAV8-4A0A0B4J246 113 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 TRBV27A0A0K0K1C4 114 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 A0A1B0GXF2 115 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 USP17L23D6RBM5 183 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 PPP1R17O96001 155 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 S100A8P05109 93 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 FGF6P10767 208 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 C14orf177Q52M58 125 aa16.45■□□□□ 0.22
FANCA-228ENST00000567943 Q5VSD8 79 aa16.44■□□□□ 0.22
FANCA-228ENST00000567943 Q6ZSA8 131 aa16.44■□□□□ 0.22
FANCA-228ENST00000567943 VCYO14598 125 aa16.43■□□□□ 0.22
FANCA-228ENST00000567943 MT-ND4LP03901 98 aa16.43■□□□□ 0.22
FANCA-228ENST00000567943 ESDP10768 282 aa16.43■□□□□ 0.22
FANCA-228ENST00000567943 SUMO2P61956 95 aaKnown RBP16.43■□□□□ 0.22
FANCA-228ENST00000567943 IGKV3OR2-268A0A0C4DH90 116 aa16.42■□□□□ 0.22
FANCA-228ENST00000567943 F8W036 122 aa16.42■□□□□ 0.22
FANCA-228ENST00000567943 CKS2P33552 79 aa16.42■□□□□ 0.22
FANCA-228ENST00000567943 ANAPC16Q96DE5 110 aa16.42■□□□□ 0.22
FANCA-228ENST00000567943 LINC00862A6NCI5 91 aa16.41■□□□□ 0.22
FANCA-228ENST00000567943 UQCC3Q6UW78 93 aa16.41■□□□□ 0.22
FANCA-228ENST00000567943 FCER1GP30273 86 aa16.4■□□□□ 0.22
FANCA-228ENST00000567943 ATP5L2Q7Z4Y8 100 aa16.4■□□□□ 0.22
FANCA-228ENST00000567943 ZNF25P17030 456 aaPredicted RBP16.39■□□□□ 0.21
FANCA-228ENST00000567943 BTF3L4Q96K17 158 aa16.39■□□□□ 0.21
FANCA-228ENST00000567943 MYCBP2O75592 4640 aa16.38■□□□□ 0.21
FANCA-228ENST00000567943 C7orf77A4D0Y5 90 aa16.38■□□□□ 0.21
FANCA-228ENST00000567943 D6R8Y8 96 aa16.38■□□□□ 0.21
FANCA-228ENST00000567943 ADCYAP1P18509 176 aa16.38■□□□□ 0.21
FANCA-228ENST00000567943 TMEM101Q96IK0 257 aa16.38■□□□□ 0.21
FANCA-228ENST00000567943 TMEM218A2RU14 115 aa16.37■□□□□ 0.21
FANCA-228ENST00000567943 PRSS1P07477 247 aa16.37■□□□□ 0.21
FANCA-228ENST00000567943 KIR2DL4Q99706 377 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms