RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 PGLYRP4Q96LB8 373 aa9.52□□□□□ -0.89
FANCA-220ENST00000566409 A0A1B0GUV1 79 aa9.51□□□□□ -0.89
FANCA-220ENST00000566409 GATCO43716 136 aaKnown RBP9.51□□□□□ -0.89
FANCA-220ENST00000566409 PRSS1P07477 247 aa9.51□□□□□ -0.89
FANCA-220ENST00000566409 REG3AQ06141 175 aa9.51□□□□□ -0.89
FANCA-220ENST00000566409 SCXQ7RTU7 201 aa9.51□□□□□ -0.89
FANCA-220ENST00000566409 RPL39LQ96EH5 51 aaKnown RBP9.51□□□□□ -0.89
FANCA-220ENST00000566409 TMEM243Q9BU79 118 aa9.51□□□□□ -0.89
FANCA-220ENST00000566409 IGLV10-54A0A075B6I4 117 aa9.5□□□□□ -0.89
FANCA-220ENST00000566409 C14orf177Q52M58 125 aa9.5□□□□□ -0.89
FANCA-220ENST00000566409 FAM210AQ96ND0 272 aa9.5□□□□□ -0.89
FANCA-220ENST00000566409 A8MWL6 223 aa9.49□□□□□ -0.89
FANCA-220ENST00000566409 SRP19P09132 144 aaKnown RBP9.49□□□□□ -0.89
FANCA-220ENST00000566409 LINC01551Q86U37 167 aa9.49□□□□□ -0.89
FANCA-220ENST00000566409 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
FANCA-220ENST00000566409 SMIM7Q9BQ49 75 aa9.49□□□□□ -0.89
FANCA-220ENST00000566409 CHAC1Q9BUX1 264 aa9.49□□□□□ -0.89
FANCA-220ENST00000566409 EIF5A2Q9GZV4 153 aaKnown RBP9.49□□□□□ -0.89
FANCA-220ENST00000566409 NDUFS6O75380 124 aaKnown RBP9.48□□□□□ -0.89
FANCA-220ENST00000566409 GAS8-AS1O95177 125 aa9.48□□□□□ -0.89
FANCA-220ENST00000566409 COTL1Q14019 142 aa9.48□□□□□ -0.89
FANCA-220ENST00000566409 CT83Q5H943 113 aa9.48□□□□□ -0.89
FANCA-220ENST00000566409 AMTP48728 403 aa9.47□□□□□ -0.89
FANCA-220ENST00000566409 CIRBP-AS1Q8TBR5 109 aa9.47□□□□□ -0.89
FANCA-220ENST00000566409 ZNF727A8MUV8 499 aa9.46□□□□□ -0.9
FANCA-220ENST00000566409 C9JQL5 133 aa9.46□□□□□ -0.9
FANCA-220ENST00000566409 KRTAP10-4P60372 401 aaPredicted RBP9.46□□□□□ -0.9
FANCA-220ENST00000566409 TSKUQ8WUA8 353 aa9.46□□□□□ -0.9
FANCA-220ENST00000566409 TRAV8-4A0A0B4J246 113 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 SDHAF1A6NFY7 115 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 UBE2L6O14933 153 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 SMIM15Q7Z3B0 74 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 C9orf163Q8N9P6 203 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 OSTCQ9NRP0 149 aa9.45□□□□□ -0.9
FANCA-220ENST00000566409 FAM231BA6NCW3 169 aa9.44□□□□□ -0.9
FANCA-220ENST00000566409 TEX261Q6UWH6 196 aa9.44□□□□□ -0.9
FANCA-220ENST00000566409 RNF185Q96GF1 192 aa9.44□□□□□ -0.9
FANCA-220ENST00000566409 V9GYV3 84 aa9.44□□□□□ -0.9
FANCA-220ENST00000566409 LRP1Q07954 4544 aaKnown RBP9.44□□□□□ -0.9
FANCA-220ENST00000566409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.43□□□□□ -0.9
FANCA-220ENST00000566409 TRBV6-5A0A0K0K1A5 114 aa9.43□□□□□ -0.9
FANCA-220ENST00000566409 A0A1B0GUT8 65 aa9.43□□□□□ -0.9
FANCA-220ENST00000566409 IGKV2-29A2NJV5 120 aaPredicted RBP9.43□□□□□ -0.9
FANCA-220ENST00000566409 PANO1I0J062 215 aa9.43□□□□□ -0.9
FANCA-220ENST00000566409 SLPIP03973 132 aa9.43□□□□□ -0.9
FANCA-220ENST00000566409 PLA2G1BP04054 148 aaKnown RBP9.43□□□□□ -0.9
FANCA-220ENST00000566409 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
FANCA-220ENST00000566409 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
FANCA-220ENST00000566409 PKHD1L1Q86WI1 4243 aa9.42□□□□□ -0.9
FANCA-220ENST00000566409 NCR2O95944 276 aa9.42□□□□□ -0.9
FANCA-220ENST00000566409 RPS10P46783 165 aaKnown RBP9.42□□□□□ -0.9
FANCA-220ENST00000566409 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
FANCA-220ENST00000566409 CLRN3Q8NCR9 226 aa9.42□□□□□ -0.9
FANCA-220ENST00000566409 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
FANCA-220ENST00000566409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.42□□□□□ -0.9
FANCA-220ENST00000566409 FGF6P10767 208 aa9.41□□□□□ -0.9
FANCA-220ENST00000566409 RAB4AP20338 218 aa9.41□□□□□ -0.9
FANCA-220ENST00000566409 CNBPP62633 177 aaKnown RBP9.41□□□□□ -0.9
FANCA-220ENST00000566409 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
FANCA-220ENST00000566409 NUP35Q8NFH5 326 aa9.41□□□□□ -0.9
FANCA-220ENST00000566409 IGKV3OR2-268A0A0C4DH90 116 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 hDV102S1A0JD36 115 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 I3L3M4 83 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 TSHBP01222 138 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 APCSP02743 223 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 ESDP10768 282 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 POLR2KP53803 58 aaKnown RBP9.4□□□□□ -0.9
FANCA-220ENST00000566409 TMEM241Q24JQ0 296 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 AMN1Q8IY45 258 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
FANCA-220ENST00000566409 GAGE12HA6NDE8 117 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 H7C423 109 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 PMCHP20382 165 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 FAM74A3Q4VXF1 159 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 AMMECR1LQ6DCA0 310 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
FANCA-220ENST00000566409 C15orf56Q8N910 161 aa9.39□□□□□ -0.91
FANCA-220ENST00000566409 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
FANCA-220ENST00000566409 SMKR1H3BMG3 65 aa9.38□□□□□ -0.91
FANCA-220ENST00000566409 ST20Q9HBF5 79 aa9.38□□□□□ -0.91
FANCA-220ENST00000566409 TMEM242Q9NWH2 141 aa9.38□□□□□ -0.91
FANCA-220ENST00000566409 TRBV27A0A0K0K1C4 114 aa9.37□□□□□ -0.91
FANCA-220ENST00000566409 ADIRFQ15847 76 aa9.37□□□□□ -0.91
FANCA-220ENST00000566409 CHCHD10Q8WYQ3 142 aaPredicted RBP9.37□□□□□ -0.91
FANCA-220ENST00000566409 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
FANCA-220ENST00000566409 RIGQ13278 110 aa9.36□□□□□ -0.91
FANCA-220ENST00000566409 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
FANCA-220ENST00000566409 NRACQ8N912 160 aa9.36□□□□□ -0.91
FANCA-220ENST00000566409 NAT8Q9UHE5 227 aa9.36□□□□□ -0.91
FANCA-220ENST00000566409 SMIM27A0A1W2PRY6 76 aa9.35□□□□□ -0.91
FANCA-220ENST00000566409 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
FANCA-220ENST00000566409 FOXI1Q12951 378 aa9.35□□□□□ -0.91
FANCA-220ENST00000566409 OR5A1Q8NGJ0 315 aa9.35□□□□□ -0.91
FANCA-220ENST00000566409 NAT8BQ9UHF3 227 aa9.35□□□□□ -0.91
FANCA-220ENST00000566409 KRTAP29-1A8MX34 341 aaPredicted RBP9.34□□□□□ -0.91
FANCA-220ENST00000566409 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
FANCA-220ENST00000566409 PEA15Q15121 130 aa9.34□□□□□ -0.91
FANCA-220ENST00000566409 MRPL51Q4U2R6 128 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms