RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PRELID3AQ96N28 172 aa17.74■□□□□ 0.43
NME3-208ENST00000565379 TMEM70Q9BUB7 260 aa17.74■□□□□ 0.43
NME3-208ENST00000565379 TRBV27A0A0K0K1C4 114 aa17.73■□□□□ 0.43
NME3-208ENST00000565379 I3L3M4 83 aa17.73■□□□□ 0.43
NME3-208ENST00000565379 VCYO14598 125 aa17.73■□□□□ 0.43
NME3-208ENST00000565379 SIVA1O15304 175 aa17.73■□□□□ 0.43
NME3-208ENST00000565379 POLR2KP53803 58 aaKnown RBP17.73■□□□□ 0.43
NME3-208ENST00000565379 PMCHP20382 165 aa17.72■□□□□ 0.43
NME3-208ENST00000565379 TRBV25-1A0A075B6N4 114 aa17.71■□□□□ 0.43
NME3-208ENST00000565379 A0A1B0GVY2 172 aa17.71■□□□□ 0.43
NME3-208ENST00000565379 K7EP13 123 aa17.71■□□□□ 0.43
NME3-208ENST00000565379 PKIAP61925 76 aa17.71■□□□□ 0.43
NME3-208ENST00000565379 Q6ZR54 194 aa17.71■□□□□ 0.43
NME3-208ENST00000565379 MRPL18Q9H0U6 180 aaKnown RBP17.71■□□□□ 0.43
NME3-208ENST00000565379 IGHV1-24A0A0C4DH33 117 aa17.7■□□□□ 0.42
NME3-208ENST00000565379 TCAPO15273 167 aa17.7■□□□□ 0.42
NME3-208ENST00000565379 ATP6V1G1O75348 118 aa17.7■□□□□ 0.42
NME3-208ENST00000565379 IQCJQ1A5X6 159 aa17.7■□□□□ 0.42
NME3-208ENST00000565379 TRAPPC1Q9Y5R8 145 aa17.7■□□□□ 0.42
NME3-208ENST00000565379 NPYP01303 97 aa17.69■□□□□ 0.42
NME3-208ENST00000565379 PRSS47A8MTI9 375 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 DNAH10OSP0CZ25 163 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 FABP9Q0Z7S8 132 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 NTM-AS1Q6ZSK4 140 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 WFDC10BQ8IUB3 73 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 KIR2DL4Q99706 377 aa17.68■□□□□ 0.42
NME3-208ENST00000565379 TRAV9-2A0A087WT02 112 aa17.67■□□□□ 0.42
NME3-208ENST00000565379 TTC32Q5I0X7 151 aa17.67■□□□□ 0.42
NME3-208ENST00000565379 LINC01556Q5JQF7 62 aa17.67■□□□□ 0.42
NME3-208ENST00000565379 CHCHD7Q9BUK0 85 aa17.67■□□□□ 0.42
NME3-208ENST00000565379 MAP1LC3AQ9H492 121 aa17.67■□□□□ 0.42
NME3-208ENST00000565379 SMIM2Q9BVW6 85 aa17.66■□□□□ 0.42
NME3-208ENST00000565379 PRSS29PA6NIE9 313 aa17.65■□□□□ 0.42
NME3-208ENST00000565379 AMTP48728 403 aa17.65■□□□□ 0.42
NME3-208ENST00000565379 KIAA1644Q3SXP7 199 aa17.65■□□□□ 0.42
NME3-208ENST00000565379 TMEM243Q9BU79 118 aa17.65■□□□□ 0.42
NME3-208ENST00000565379 C10orf126Q8N4M7 172 aa17.64■□□□□ 0.41
NME3-208ENST00000565379 CHCHD5Q9BSY4 110 aa17.64■□□□□ 0.41
NME3-208ENST00000565379 PCLOQ9Y6V0 5065 aa17.63■□□□□ 0.41
NME3-208ENST00000565379 NBDYA0A0U1RRE5 68 aa17.63■□□□□ 0.41
NME3-208ENST00000565379 FCER1GP30273 86 aa17.63■□□□□ 0.41
NME3-208ENST00000565379 NIT1Q86X76 327 aa17.63■□□□□ 0.41
NME3-208ENST00000565379 H7C423 109 aa17.62■□□□□ 0.41
NME3-208ENST00000565379 TSHBP01222 138 aa17.62■□□□□ 0.41
NME3-208ENST00000565379 ALKBH7Q9BT30 221 aaPredicted RBP17.62■□□□□ 0.41
NME3-208ENST00000565379 UBE2L6O14933 153 aa17.61■□□□□ 0.41
NME3-208ENST00000565379 BTF3P20290 206 aaKnown RBP17.61■□□□□ 0.41
NME3-208ENST00000565379 A0A087WX48 190 aa17.6■□□□□ 0.41
NME3-208ENST00000565379 COLCA2A8K830 154 aa17.6■□□□□ 0.41
NME3-208ENST00000565379 NXT2Q9NPJ8 142 aaKnown RBP17.6■□□□□ 0.41
NME3-208ENST00000565379 TMEM262E9PQX1 116 aa17.59■□□□□ 0.41
NME3-208ENST00000565379 K7EMI3 77 aa17.59■□□□□ 0.41
NME3-208ENST00000565379 SCO1O75880 301 aa17.59■□□□□ 0.41
NME3-208ENST00000565379 RAB5AP20339 215 aa17.59■□□□□ 0.41
NME3-208ENST00000565379 Q8N8P6 123 aa17.58■□□□□ 0.4
NME3-208ENST00000565379 ESDP10768 282 aa17.57■□□□□ 0.4
NME3-208ENST00000565379 LOC389332A0A1B0GUA5 103 aa17.56■□□□□ 0.4
NME3-208ENST00000565379 SMAGPQ0VAQ4 97 aa17.56■□□□□ 0.4
NME3-208ENST00000565379 DEFB104AQ8WTQ1 72 aa17.56■□□□□ 0.4
NME3-208ENST00000565379 TMEM18Q96B42 140 aa17.56■□□□□ 0.4
NME3-208ENST00000565379 A0A1B0GUV1 79 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 IGHV3-30P01768 117 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 IGHV3-33P01772 117 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 IGHV3-30-3P0DP02 117 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 IGHV3-30-5P0DP03 117 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 GAGE6Q13070 117 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 C1orf134Q5TEV5 83 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 RYR1P21817 5038 aa17.55■□□□□ 0.4
NME3-208ENST00000565379 LAGE3Q14657 143 aa17.53■□□□□ 0.4
NME3-208ENST00000565379 PRSS3P2Q8NHM4 247 aa17.53■□□□□ 0.4
NME3-208ENST00000565379 ZNF25P17030 456 aaPredicted RBP17.52■□□□□ 0.4
NME3-208ENST00000565379 ORMDL2Q53FV1 153 aa17.52■□□□□ 0.4
NME3-208ENST00000565379 MPV17L2Q567V2 206 aa17.52■□□□□ 0.4
NME3-208ENST00000565379 IBA57-AS1B1ANH7 110 aa17.51■□□□□ 0.39
NME3-208ENST00000565379 G0S2P27469 103 aa17.51■□□□□ 0.39
NME3-208ENST00000565379 RBX1P62877 108 aa17.51■□□□□ 0.39
NME3-208ENST00000565379 AMMECR1LQ6DCA0 310 aa17.51■□□□□ 0.39
NME3-208ENST00000565379 KRTAP1-5Q9BYS1 174 aa17.51■□□□□ 0.39
NME3-208ENST00000565379 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.5■□□□□ 0.39
NME3-208ENST00000565379 IGKV2-29A2NJV5 120 aaPredicted RBP17.5■□□□□ 0.39
NME3-208ENST00000565379 TRGC2P03986 189 aa17.5■□□□□ 0.39
NME3-208ENST00000565379 IFI27P40305 119 aaPredicted RBP17.5■□□□□ 0.39
NME3-208ENST00000565379 C20orf203Q8NBC4 194 aa17.5■□□□□ 0.39
NME3-208ENST00000565379 LRP1BQ9NZR2 4599 aa17.49■□□□□ 0.39
NME3-208ENST00000565379 TNP2Q05952 138 aa17.49■□□□□ 0.39
NME3-208ENST00000565379 MRPL52Q86TS9 123 aaKnown RBP17.49■□□□□ 0.39
NME3-208ENST00000565379 FGF6P10767 208 aa17.48■□□□□ 0.39
NME3-208ENST00000565379 NFE4Q86UQ8 179 aa17.48■□□□□ 0.39
NME3-208ENST00000565379 C18orf32Q8TCD1 76 aa17.48■□□□□ 0.39
NME3-208ENST00000565379 TMEM101Q96IK0 257 aa17.48■□□□□ 0.39
NME3-208ENST00000565379 LINC01546A6NGU7 62 aa17.47■□□□□ 0.39
NME3-208ENST00000565379 ANGP03950 147 aaKnown RBP17.47■□□□□ 0.39
NME3-208ENST00000565379 RAB5BP61020 215 aa17.47■□□□□ 0.39
NME3-208ENST00000565379 FA2HQ7L5A8 372 aa17.47■□□□□ 0.39
NME3-208ENST00000565379 C6orf223Q8N319 242 aa17.47■□□□□ 0.39
NME3-208ENST00000565379 Q8N3U1 123 aa17.47■□□□□ 0.39
NME3-208ENST00000565379 CSDC2Q9Y534 153 aaKnown RBP17.47■□□□□ 0.39
NME3-208ENST00000565379 TRAV8-3A0A0A6YYJ7 113 aa17.46■□□□□ 0.39
NME3-208ENST00000565379 Q0VG73 95 aa17.46■□□□□ 0.39
NME3-208ENST00000565379 RNASEKQ6P5S7 137 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms