RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 OR10AG1Q8NH19 301 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 LINC00526Q96FQ7 95 aa4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 ZNF471Q9BX82 626 aaPredicted RBP4.58□□□□□ -1.68
HERPUD1-206ENST00000563343 TMSB15BA0A087X1C1 80 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 A0A1W2PPV4 95 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 FOXI1Q12951 378 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 ZNF674Q2M3X9 581 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 CARD19Q96LW7 228 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 TMEM243Q9BU79 118 aa4.57□□□□□ -1.68
HERPUD1-206ENST00000563343 PLA2G10O15496 165 aa4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 GCHFRP30047 84 aa4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 RPL13AP40429 203 aaKnown RBP4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 SULT1A2P50226 295 aa4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 C9orf116Q5BN46 136 aaPredicted RBP4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 CHCHD10Q8WYQ3 142 aaPredicted RBP4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 PKIGQ9Y2B9 76 aa4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 HSPB11Q9Y547 144 aa4.56□□□□□ -1.68
HERPUD1-206ENST00000563343 TRAV1-1A0A0B4J248 108 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 C9orf118A6NHY6 69 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 KRTAP9-7A8MTY7 169 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 M0QY20 66 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 SNAI2O43623 268 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 TSPAN13O95857 204 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 RPL12P30050 165 aaKnown RBP4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 CDC34P49427 236 aaPredicted RBP4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 CYCSP99999 105 aaKnown RBP4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 FAM162BQ5T6X4 162 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 PGLYRP4Q96LB8 373 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 MARVELD1Q9BSK0 173 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 MED28Q9H204 178 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 WFDC1Q9HC57 220 aa4.55□□□□□ -1.68
HERPUD1-206ENST00000563343 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 FAM240BA0A1B0GVZ2 78 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 F5H697 171 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 SIX6O95475 246 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 CXCL1P09341 107 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 UBE2D1P51668 147 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 SYCNQ0VAF6 134 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 GAGE2BQ13066 116 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 TPRXLQ17RH7 258 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 SCGB1C1Q8TD33 95 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 SMIM3Q9BZL3 60 aa4.54□□□□□ -1.68
HERPUD1-206ENST00000563343 IGHV1-58A0A0C4DH39 117 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 IGKV3OR2-268A0A0C4DH90 116 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 MUC21A0A140T8X8 626 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 A0A1W2PRE2 83 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 B5MCH6 92 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 PEX7O00628 323 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 LYRM1O43325 122 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 OR5AL1P0C617 328 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 BCL2P10415 239 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 LRRC37A5PQ49AS3 106 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 RPP21Q9H633 154 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 TMEM167BQ9NRX6 74 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 NUDT15Q9NV35 164 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 ZFP30Q9Y2G7 519 aa4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 CARHSP1Q9Y2V2 147 aaKnown RBP4.53□□□□□ -1.68
HERPUD1-206ENST00000563343 NKX2-5P52952 324 aaPredicted RBP4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 IFITM2Q01629 132 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 SUMO4Q6EEV6 95 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 NUP35Q8NFH5 326 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 NUDT10Q8NFP7 164 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 NUDT11Q96G61 164 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 KRTAP4-1Q9BYQ7 146 aa4.52□□□□□ -1.69
HERPUD1-206ENST00000563343 INMT-MINDY4F8WBC2 141 aa4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 UBE2L6O14933 153 aa4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 CXorf1O96002 111 aa4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 LTAP01374 205 aa4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 FGF6P10767 208 aa4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 MEF2BQ02080 365 aaPredicted RBP4.51□□□□□ -1.69
HERPUD1-206ENST00000563343 A0A087WZ39 114 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 A0A087X002 238 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 CCL25O15444 150 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 CAMPP49913 170 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 EIF5AP63241 154 aaKnown RBP4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 SPANXN1Q5VSR9 72 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 KRTAP7-1Q8IUC3 87 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 PPP1R1CQ8WVI7 109 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 HIST1H2BAQ96A08 127 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 FMC1Q96HJ9 113 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 AP1S3Q96PC3 154 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 ALG5Q9Y673 324 aa4.5□□□□□ -1.69
HERPUD1-206ENST00000563343 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 FAM74A7A6NL05 159 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 APOMO95445 188 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 MPC2O95563 127 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 ATP6V0CP27449 155 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 XCL1P47992 114 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 H2BFSP57053 126 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 RAB14P61106 215 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 COTL1Q14019 142 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 ZNF726P1Q15940 193 aa4.49□□□□□ -1.69
HERPUD1-206ENST00000563343 RASL11AQ6T310 242 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms