RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MRAP2Q96G30 205 aa11.03□□□□□ -0.64
CDT1-202ENST00000562747 RNF185Q96GF1 192 aa11.03□□□□□ -0.64
CDT1-202ENST00000562747 VPS13BQ7Z7G8 4022 aa11.03□□□□□ -0.64
CDT1-202ENST00000562747 LRCOL1A6NCL2 159 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 EPM2AB3EWF7 344 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 CDPF1Q6NVV7 123 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 AMN1Q8IY45 258 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 UBE2WQ96B02 151 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 TMEM243Q9BU79 118 aa11.02□□□□□ -0.65
CDT1-202ENST00000562747 SDHAF1A6NFY7 115 aa11.01□□□□□ -0.65
CDT1-202ENST00000562747 NCR2O95944 276 aa11.01□□□□□ -0.65
CDT1-202ENST00000562747 ANGP03950 147 aaKnown RBP11.01□□□□□ -0.65
CDT1-202ENST00000562747 GAGE6Q13070 117 aa11.01□□□□□ -0.65
CDT1-202ENST00000562747 MYCBP2O75592 4640 aa11.01□□□□□ -0.65
CDT1-202ENST00000562747 CRPP02741 224 aa11□□□□□ -0.65
CDT1-202ENST00000562747 AMTP48728 403 aa11□□□□□ -0.65
CDT1-202ENST00000562747 XGP55808 180 aa11□□□□□ -0.65
CDT1-202ENST00000562747 RBX1P62877 108 aa11□□□□□ -0.65
CDT1-202ENST00000562747 Q8N976 141 aa11□□□□□ -0.65
CDT1-202ENST00000562747 ANAPC16Q96DE5 110 aa11□□□□□ -0.65
CDT1-202ENST00000562747 IGKV2D-24A0A075B6R9 120 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 A0A1B0GUV1 79 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 UBE2L6O14933 153 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 MT-ND4LP03901 98 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 S100A8P05109 93 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 INAFM2P0DMQ5 153 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 FAM104BQ5XKR9 115 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
CDT1-202ENST00000562747 I3L3M4 83 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 GAS8-AS1O95177 125 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 PPP1R17O96001 155 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 CAMPP49913 170 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 HBBP68871 147 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 DEFB104AQ8WTQ1 72 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 PRR34Q9NV39 138 aa10.98□□□□□ -0.65
CDT1-202ENST00000562747 A0A1B0GXF2 115 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 TMEM218A2RU14 115 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 APCSP02743 223 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 PMCHP20382 165 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 RPS10P46783 165 aaKnown RBP10.97□□□□□ -0.65
CDT1-202ENST00000562747 MIAQ16674 131 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 Q5VSD8 79 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 MRPL54Q6P161 138 aaKnown RBP10.97□□□□□ -0.65
CDT1-202ENST00000562747 ATP5L2Q7Z4Y8 100 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 Q8N814 137 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 TMEM70Q9BUB7 260 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 C1orf43Q9BWL3 253 aa10.97□□□□□ -0.65
CDT1-202ENST00000562747 LINC00862A6NCI5 91 aa10.96□□□□□ -0.65
CDT1-202ENST00000562747 F8W036 122 aa10.96□□□□□ -0.65
CDT1-202ENST00000562747 POLR2KP53803 58 aaKnown RBP10.96□□□□□ -0.65
CDT1-202ENST00000562747 MRPL51Q4U2R6 128 aaKnown RBP10.96□□□□□ -0.65
CDT1-202ENST00000562747 NTN5Q8WTR8 489 aaPredicted RBP10.96□□□□□ -0.65
CDT1-202ENST00000562747 TRBV27A0A0K0K1C4 114 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 H7C423 109 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 ADCYAP1P18509 176 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 COMMD7Q86VX2 200 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 LINC00269Q8N2A0 174 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
CDT1-202ENST00000562747 IGLV4-60A0A075B6I1 120 aa10.94□□□□□ -0.66
CDT1-202ENST00000562747 SMKR1H3BMG3 65 aa10.94□□□□□ -0.66
CDT1-202ENST00000562747 NRACQ8N912 160 aa10.94□□□□□ -0.66
CDT1-202ENST00000562747 SUMO2P61956 95 aaKnown RBP10.93□□□□□ -0.66
CDT1-202ENST00000562747 REG3AQ06141 175 aa10.93□□□□□ -0.66
CDT1-202ENST00000562747 WFDC2Q14508 124 aa10.93□□□□□ -0.66
CDT1-202ENST00000562747 CLPSL2Q6UWE3 100 aa10.93□□□□□ -0.66
CDT1-202ENST00000562747 BAALCQ8WXS3 180 aa10.93□□□□□ -0.66
CDT1-202ENST00000562747 SEC11CQ9BY50 192 aa10.93□□□□□ -0.66
CDT1-202ENST00000562747 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
CDT1-202ENST00000562747 VCYO14598 125 aa10.92□□□□□ -0.66
CDT1-202ENST00000562747 TSHBP01222 138 aa10.92□□□□□ -0.66
CDT1-202ENST00000562747 CKS2P33552 79 aa10.92□□□□□ -0.66
CDT1-202ENST00000562747 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
CDT1-202ENST00000562747 TRBV24-1A0A075B6N3 115 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.91□□□□□ -0.66
CDT1-202ENST00000562747 TRAV8-4A0A0B4J246 113 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 IGKV2-29A2NJV5 120 aaPredicted RBP10.91□□□□□ -0.66
CDT1-202ENST00000562747 LECT2O14960 151 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 ESDP10768 282 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 AMMECR1LQ6DCA0 310 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 C20orf78Q9BR46 151 aa10.91□□□□□ -0.66
CDT1-202ENST00000562747 FLG2Q5D862 2391 aaPredicted RBP10.91□□□□□ -0.66
CDT1-202ENST00000562747 PPBPP02775 128 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
CDT1-202ENST00000562747 GCSHP23434 173 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 HAMPP81172 84 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 BTF3L4Q96K17 158 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 IMMP2LQ96T52 175 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 CTDSP1Q9GZU7 261 aa10.9□□□□□ -0.66
CDT1-202ENST00000562747 D6R8Y8 96 aa10.89□□□□□ -0.67
CDT1-202ENST00000562747 PHOX2AO14813 284 aa10.89□□□□□ -0.67
CDT1-202ENST00000562747 SMR3BP02814 79 aaPredicted RBP10.89□□□□□ -0.67
CDT1-202ENST00000562747 FGF6P10767 208 aa10.89□□□□□ -0.67
CDT1-202ENST00000562747 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
CDT1-202ENST00000562747 RNASEKQ6P5S7 137 aaKnown RBP10.89□□□□□ -0.67
CDT1-202ENST00000562747 KIR2DL4Q99706 377 aa10.89□□□□□ -0.67
CDT1-202ENST00000562747 SRRM2Q9UQ35 2752 aaKnown RBP10.89□□□□□ -0.67
CDT1-202ENST00000562747 C7orf77A4D0Y5 90 aa10.88□□□□□ -0.67
CDT1-202ENST00000562747 TNFRSF6BO95407 300 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms