RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	TRBV20OR9-2	A0A075B6H5	130 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	TRAV8-4	A0A0B4J246	113 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	TRGC1	P0CF51	173 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	CHTF8	P0CG12	524 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	CNBP	P62633	177 aa	Known RBP	11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	DPH3P1	Q9H4G8	78 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	MED9	Q9NWA0	146 aa		11.52	□□□□□ -0.57
DCAF11-238	ENST00000561375	XKRY2	A2RUG3	117 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375		F2Z2F3	143 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	UBE2L6	O14933	153 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	PDE6D	O43924	150 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	SLPI	P03973	132 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	NTF3	P20783	257 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	AMT	P48728	403 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	NIT2	Q9NQR4	276 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	AP5S1	Q9NUS5	200 aa		11.51	□□□□□ -0.57
DCAF11-238	ENST00000561375	IGHV3-64	A0A075B6Q5	118 aa		11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375	IGKV3OR2-268	A0A0C4DH90	116 aa		11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375		A0A1B0GUV1	79 aa		11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375	TAGLN2	P37802	199 aa	Known RBP	11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375	DPH3	Q96FX2	82 aa		11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375	PGLYRP4	Q96LB8	373 aa		11.5	□□□□□ -0.57
DCAF11-238	ENST00000561375	CIRBP	Q14011	172 aa	Known RBP	11.49	□□□□□ -0.57
DCAF11-238	ENST00000561375	COTL1	Q14019	142 aa		11.49	□□□□□ -0.57
DCAF11-238	ENST00000561375	WDR73	Q6P4I2	378 aa		11.49	□□□□□ -0.57
DCAF11-238	ENST00000561375	TEX261	Q6UWH6	196 aa		11.49	□□□□□ -0.57
DCAF11-238	ENST00000561375	SMIM12	Q96EX1	92 aa		11.49	□□□□□ -0.57
DCAF11-238	ENST00000561375	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.48	□□□□□ -0.57
DCAF11-238	ENST00000561375	TRAV26-2	A0A0B4J265	109 aa		11.48	□□□□□ -0.57
DCAF11-238	ENST00000561375	CTRL	P40313	264 aa		11.48	□□□□□ -0.57
DCAF11-238	ENST00000561375		A0A087WYN8	130 aa		11.47	□□□□□ -0.57
DCAF11-238	ENST00000561375	GAGE12H	A6NDE8	117 aa		11.47	□□□□□ -0.57
DCAF11-238	ENST00000561375	TWIST1	Q15672	202 aa		11.47	□□□□□ -0.57
DCAF11-238	ENST00000561375	NUDT10	Q8NFP7	164 aa		11.47	□□□□□ -0.57
DCAF11-238	ENST00000561375	NUDT11	Q96G61	164 aa		11.47	□□□□□ -0.57
DCAF11-238	ENST00000561375	MT1HL1	P0DM35	61 aa		11.46	□□□□□ -0.57
DCAF11-238	ENST00000561375	C15orf56	Q8N910	161 aa		11.46	□□□□□ -0.57
DCAF11-238	ENST00000561375	GATD1	Q8NB37	220 aa		11.46	□□□□□ -0.57
DCAF11-238	ENST00000561375	SPACA4	Q8TDM5	124 aa		11.46	□□□□□ -0.57
DCAF11-238	ENST00000561375	BIN3	Q9NQY0	253 aa		11.46	□□□□□ -0.57
DCAF11-238	ENST00000561375	HIGD2B	Q4VC39	106 aa		11.45	□□□□□ -0.58
DCAF11-238	ENST00000561375	RPL39L	Q96EH5	51 aa	Known RBP	11.45	□□□□□ -0.58
DCAF11-238	ENST00000561375	EIF5A2	Q9GZV4	153 aa	Known RBP	11.45	□□□□□ -0.58
DCAF11-238	ENST00000561375	RNASE7	Q9H1E1	156 aa	Known RBP	11.45	□□□□□ -0.58
DCAF11-238	ENST00000561375	RPP21	Q9H633	154 aa	Known RBP	11.45	□□□□□ -0.58
DCAF11-238	ENST00000561375	FAM210A	Q96ND0	272 aa		11.44	□□□□□ -0.58
DCAF11-238	ENST00000561375	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375	TMEM250	H0YL14	139 aa		11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375		K7EN84	100 aa		11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375	AMMECR1L	Q6DCA0	310 aa		11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375		Q6ZRU5	148 aa		11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375	RNF185	Q96GF1	192 aa		11.43	□□□□□ -0.58
DCAF11-238	ENST00000561375	PHOX2A	O14813	284 aa		11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	CEBPG	P53567	150 aa		11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	FOXA3	P55318	350 aa	Predicted RBP	11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	COX6A2	Q02221	97 aa		11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	CNFN	Q9BYD5	112 aa		11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	UBR4	Q5T4S7	5183 aa		11.42	□□□□□ -0.58
DCAF11-238	ENST00000561375	RNASEK	Q6P5S7	137 aa	Known RBP	11.41	□□□□□ -0.58
DCAF11-238	ENST00000561375	OCC1	Q8TAD7	63 aa		11.41	□□□□□ -0.58
DCAF11-238	ENST00000561375	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.41	□□□□□ -0.58
DCAF11-238	ENST00000561375	IGKV2-24	A0A0C4DH68	120 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	APCS	P02743	223 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	SRP19	P09132	144 aa	Known RBP	11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	CFAP161	Q6P656	301 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	PRSS3P2	Q8NHM4	247 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	GTSF1	Q8WW33	167 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	PLAC8	Q9NZF1	115 aa		11.4	□□□□□ -0.58
DCAF11-238	ENST00000561375	RPS10	P46783	165 aa	Known RBP	11.39	□□□□□ -0.59
DCAF11-238	ENST00000561375	MAJIN	Q3KP22	176 aa		11.39	□□□□□ -0.59
DCAF11-238	ENST00000561375	C7orf33	Q8WU49	177 aa		11.39	□□□□□ -0.59
DCAF11-238	ENST00000561375	FGF6	P10767	208 aa		11.38	□□□□□ -0.59
DCAF11-238	ENST00000561375	SDHAF1	A6NFY7	115 aa		11.37	□□□□□ -0.59
DCAF11-238	ENST00000561375	NDUFS6	O75380	124 aa	Known RBP	11.37	□□□□□ -0.59
DCAF11-238	ENST00000561375	SMIM15	Q7Z3B0	74 aa		11.37	□□□□□ -0.59
DCAF11-238	ENST00000561375	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.36	□□□□□ -0.59
DCAF11-238	ENST00000561375		C9JQL5	133 aa		11.36	□□□□□ -0.59
DCAF11-238	ENST00000561375	NCR2	O95944	276 aa		11.36	□□□□□ -0.59
DCAF11-238	ENST00000561375	SRSF3	P84103	164 aa	Known RBP	11.36	□□□□□ -0.59
DCAF11-238	ENST00000561375	SMIM7	Q9BQ49	75 aa		11.36	□□□□□ -0.59
DCAF11-238	ENST00000561375		A0A096LNI7	61 aa		11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	ZNF727	A8MUV8	499 aa		11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	GATC	O43716	136 aa	Known RBP	11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	XCL1	P47992	114 aa		11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	FOXI1	Q12951	378 aa		11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	STPG4	Q8N801	248 aa		11.35	□□□□□ -0.59
DCAF11-238	ENST00000561375	GAS8-AS1	O95177	125 aa		11.34	□□□□□ -0.59
DCAF11-238	ENST00000561375	LINC00526	Q96FQ7	95 aa		11.34	□□□□□ -0.59
DCAF11-238	ENST00000561375		H7C423	109 aa		11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	PMCH	P20382	165 aa		11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	PRR3	P79522	188 aa	Known RBP	11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	PEA15	Q15121	130 aa		11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	OR5A1	Q8NGJ0	315 aa		11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	TMEM242	Q9NWH2	141 aa		11.33	□□□□□ -0.6
DCAF11-238	ENST00000561375	FAM231B	A6NCW3	169 aa		11.32	□□□□□ -0.6
DCAF11-238	ENST00000561375		I3L3M4	83 aa		11.32	□□□□□ -0.6
DCAF11-238	ENST00000561375	CCL25	O15444	150 aa		11.32	□□□□□ -0.6
DCAF11-238	ENST00000561375	IFITM2	Q01629	132 aa		11.32	□□□□□ -0.6
DCAF11-238	ENST00000561375	BTF3L4	Q96K17	158 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms