RNA–Protein interactions for RNA: ENST00000561258.1

VPS13C-210, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 3

Gene VPS13C, Length 614 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-210ENST00000561258 NBDYA0A0U1RRE5 68 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 MAP1LC3B2A6NCE7 125 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 OOSP1A8MZH6 123 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 APOA2P02652 100 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 NFYBP25208 207 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 Q1T7F1 81 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 KRTAP13-4Q3LI77 160 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 BCL2L15Q5TBC7 163 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 Q6ZRN7 208 aaPredicted RBP2.13□□□□□ -2.07
VPS13C-210ENST00000561258 ZNF714Q96N38 554 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 YPEL2Q96QA6 119 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 PRADC1Q9BSG0 188 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 MAP1LC3BQ9GZQ8 125 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 CST9LQ9H4G1 147 aa2.13□□□□□ -2.07
VPS13C-210ENST00000561258 NHP2Q9NX24 153 aaKnown RBP2.13□□□□□ -2.07
VPS13C-210ENST00000561258 TMEM256-PLSCR3K7ERE1 68 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 UBBP0CG47 229 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 EDDM3BP56851 147 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 UBE2BP63146 152 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 ZNF846Q147U1 533 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 PCOTHQ58A44 107 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 ZCCHC23Q6ZST2 131 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 AKAP14Q86UN6 197 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 KRTAP13-1Q8IUC0 172 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 OR10K1Q8NGX5 313 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 GPX7Q96SL4 187 aaPredicted RBP2.12□□□□□ -2.07
VPS13C-210ENST00000561258 MRPL32Q9BYC8 188 aaKnown RBP2.12□□□□□ -2.07
VPS13C-210ENST00000561258 TAS2R4Q9NYW5 299 aa2.12□□□□□ -2.07
VPS13C-210ENST00000561258 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 A0A1B0GWA3 101 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 G3V318 75 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 GGCTO75223 188 aaKnown RBP2.11□□□□□ -2.07
VPS13C-210ENST00000561258 SCTP09683 121 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 TPPP2P59282 170 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 ELOBQ15370 118 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 MBD3L1Q8WWY6 194 aa2.11□□□□□ -2.07
VPS13C-210ENST00000561258 MEIKINA0A087WXM9 373 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 A0A1W2PRE2 83 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 TRGC2P03986 189 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 MIFP14174 115 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 GPX2P18283 190 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 RPL38P63173 70 aaKnown RBP2.1□□□□□ -2.07
VPS13C-210ENST00000561258 DEFB114Q30KQ6 69 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 SMIM21Q3B7S5 101 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 SPANXN5Q5MJ07 72 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 CTAGE3PQ8IX95 158 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 C4orf33Q8N1A6 199 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 OR2T10Q8NGZ9 312 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 DYDC1Q8WWB3 177 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 SLC50A1Q9BRV3 221 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 RTL8AQ9BWD3 113 aa2.1□□□□□ -2.07
VPS13C-210ENST00000561258 C6orf62Q9GZU0 229 aaPredicted RBP2.1□□□□□ -2.07
VPS13C-210ENST00000561258 HMGN4O00479 90 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 KPNA4O00629 521 aaPredicted RBP2.09□□□□□ -2.07
VPS13C-210ENST00000561258 RER1O15258 196 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 AKR1C3P42330 323 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 KRTAP12-1P59990 96 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 SOSTDC1Q6X4U4 206 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 COA5Q86WW8 74 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 MAGOHBQ96A72 148 aaKnown RBP2.09□□□□□ -2.07
VPS13C-210ENST00000561258 CARD19Q96LW7 228 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 RERGLQ9H628 205 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 BCL2L10Q9HD36 194 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 CALML5Q9NZT1 146 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 OR52A1Q9UKL2 312 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 LINC00312Q9Y6C7 94 aa2.09□□□□□ -2.07
VPS13C-210ENST00000561258 TNXBP22105 4242 aa2.09□□□□□ -2.08
VPS13C-210ENST00000561258 TRAV3A0A0B4J244 114 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 TRAV1-1A0A0B4J248 108 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 NBEAP1P0C6P0 100 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 ASAH2BP0C7U1 165 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 BAALC-AS2P0C853 105 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 MT1HL1P0DM35 61 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 CLECL1Q8IZS7 167 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 LINC00471Q8N535 108 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 TCTEX1D1Q8N7M0 179 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 SPTSSAQ969W0 71 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 DPH3P1Q9H4G8 78 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 RASL12Q9NYN1 266 aa2.08□□□□□ -2.08
VPS13C-210ENST00000561258 A0A1B0GW64 132 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 FUOMA2VDF0 154 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 M0R135 149 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 MGST1P10620 155 aaKnown RBP2.07□□□□□ -2.08
VPS13C-210ENST00000561258 HTN3P15516 51 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 RHOGP84095 191 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 CDK5R1Q15078 307 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 ESRGQ1W209 222 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 GLYATL3Q5SZD4 288 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 HEPN1Q6WQI6 88 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 ANGPTL5Q86XS5 388 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 Q96M85 177 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 MRPL57Q9BQC6 102 aaKnown RBP2.07□□□□□ -2.08
VPS13C-210ENST00000561258 NPCDR1Q9BY65 106 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 CST11Q9H112 138 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 LAMTOR3Q9UHA4 124 aa2.07□□□□□ -2.08
VPS13C-210ENST00000561258 C2orf70A6NJV1 201 aa2.06□□□□□ -2.08
VPS13C-210ENST00000561258 H3BQF6 201 aa2.06□□□□□ -2.08
VPS13C-210ENST00000561258 CRPP02741 224 aa2.06□□□□□ -2.08
VPS13C-210ENST00000561258 GPX1P07203 203 aa2.06□□□□□ -2.08
VPS13C-210ENST00000561258 LINC00032P0C843 101 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms