RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 HIST1H2BNQ99877 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 HIST1H2BMQ99879 126 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 ST20Q9HBF5 79 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 TNFRSF18Q9Y5U5 241 aa6.46□□□□□ -1.38
HERC1-206ENST00000559996 PPP1R17O96001 155 aa6.45□□□□□ -1.38
HERC1-206ENST00000559996 IFI27P40305 119 aaPredicted RBP6.45□□□□□ -1.38
HERC1-206ENST00000559996 Q0VG73 95 aa6.45□□□□□ -1.38
HERC1-206ENST00000559996 PLECQ15149 4684 aaKnown RBP6.45□□□□□ -1.38
HERC1-206ENST00000559996 ZFAND6Q6FIF0 208 aa6.45□□□□□ -1.38
HERC1-206ENST00000559996 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.45□□□□□ -1.38
HERC1-206ENST00000559996 ATP6V0E2Q8NHE4 81 aa6.45□□□□□ -1.38
HERC1-206ENST00000559996 ICOSQ9Y6W8 199 aa6.45□□□□□ -1.38
HERC1-206ENST00000559996 LOC389332A0A1B0GUA5 103 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 NUPR2A6NF83 97 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 VCYO14598 125 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 NUPR1O60356 82 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 NUDT3O95989 172 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 TSHBP01222 138 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 CASC10Q5T4H9 136 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 DAZ4Q86SG3 579 aaKnown RBP6.44□□□□□ -1.38
HERC1-206ENST00000559996 Q8N8P6 123 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 C15orf53Q8NAA6 179 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 SMIM2Q9BVW6 85 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 GTSF1LQ9H1H1 148 aa6.44□□□□□ -1.38
HERC1-206ENST00000559996 DAZ3Q9NR90 486 aaKnown RBP6.44□□□□□ -1.38
HERC1-206ENST00000559996 I3L3M4 83 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 TCAPO15273 167 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 ESDP10768 282 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 TIRAPP58753 221 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 NIT1Q86X76 327 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 LYSTQ99698 3801 aa6.43□□□□□ -1.38
HERC1-206ENST00000559996 A0A096LNJ9 63 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 C3orf84H3BNL1 204 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 EREGO14944 169 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 SH2D6Q7Z4S9 175 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 FAM104AQ969W3 186 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 MAP1LC3AQ9H492 121 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 KLK5Q9Y337 293 aaPredicted RBP6.42□□□□□ -1.38
HERC1-206ENST00000559996 LINC00588Q9Y4M8 146 aa6.42□□□□□ -1.38
HERC1-206ENST00000559996 TRBV6-8A0A0A6YYG3 113 aa6.41□□□□□ -1.38
HERC1-206ENST00000559996 C1orf196B1AJZ1 125 aa6.41□□□□□ -1.38
HERC1-206ENST00000559996 LINC00614P0C842 121 aa6.41□□□□□ -1.38
HERC1-206ENST00000559996 PMCHP20382 165 aa6.41□□□□□ -1.38
HERC1-206ENST00000559996 TCTAP57738 103 aa6.41□□□□□ -1.38
HERC1-206ENST00000559996 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
HERC1-206ENST00000559996 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
HERC1-206ENST00000559996 LELP1Q5T871 98 aa6.4□□□□□ -1.38
HERC1-206ENST00000559996 PRSS3P2Q8NHM4 247 aa6.4□□□□□ -1.38
HERC1-206ENST00000559996 TENM2Q9NT68 2774 aa6.4□□□□□ -1.39
HERC1-206ENST00000559996 SERF1AO75920 110 aa6.39□□□□□ -1.39
HERC1-206ENST00000559996 COTL1Q14019 142 aa6.39□□□□□ -1.39
HERC1-206ENST00000559996 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
HERC1-206ENST00000559996 UPK3BQ9BT76 320 aa6.39□□□□□ -1.39
HERC1-206ENST00000559996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.38□□□□□ -1.39
HERC1-206ENST00000559996 IGKV2-29A2NJV5 120 aaPredicted RBP6.38□□□□□ -1.39
HERC1-206ENST00000559996 K7EMI3 77 aa6.38□□□□□ -1.39
HERC1-206ENST00000559996 RPL39P62891 51 aaKnown RBP6.38□□□□□ -1.39
HERC1-206ENST00000559996 LAGE3Q14657 143 aa6.38□□□□□ -1.39
HERC1-206ENST00000559996 WFDC10BQ8IUB3 73 aa6.38□□□□□ -1.39
HERC1-206ENST00000559996 KIR2DL4Q99706 377 aa6.38□□□□□ -1.39
HERC1-206ENST00000559996 MRPS16Q9Y3D3 137 aaKnown RBP6.38□□□□□ -1.39
HERC1-206ENST00000559996 IGHV1-24A0A0C4DH33 117 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 FCER1GP30273 86 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 NDUFA6P56556 154 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 TMEM97Q5BJF2 176 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 CHCHD1Q96BP2 118 aaKnown RBP6.37□□□□□ -1.39
HERC1-206ENST00000559996 AP5S1Q9NUS5 200 aa6.37□□□□□ -1.39
HERC1-206ENST00000559996 VPS13DQ5THJ4 4388 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 DNAH1Q9P2D7 4330 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 KMT2AQ03164 3969 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 IGLV4-60A0A075B6I1 120 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 A0A1B0GUV1 79 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 IGIPA6NJ69 53 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 AMTP48728 403 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 CCL18P55774 89 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 RAB5BP61020 215 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 ORMDL2Q53FV1 153 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 PDZD11Q5EBL8 140 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 C2orf66Q6UXQ4 117 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 FA2HQ7L5A8 372 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
HERC1-206ENST00000559996 BAGE3Q86Y29 109 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 FAM19A2Q8N3H0 131 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 TMEM243Q9BU79 118 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 UBE2D4Q9Y2X8 147 aa6.36□□□□□ -1.39
HERC1-206ENST00000559996 C5orf52A6NGY3 159 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 H7C423 109 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 GAGE6Q13070 117 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 MPV17L2Q567V2 206 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 RNASEKQ6P5S7 137 aaKnown RBP6.35□□□□□ -1.39
HERC1-206ENST00000559996 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
HERC1-206ENST00000559996 Q9H8V8 135 aa6.35□□□□□ -1.39
HERC1-206ENST00000559996 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 DNAH10OSP0CZ25 163 aa6.34□□□□□ -1.39
HERC1-206ENST00000559996 FGF6P10767 208 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms