RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 DEFB4AO15263 64 aa10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 Q8NFD4 153 aa10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 CHCHD10Q8WYQ3 142 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 K7EIM0 57 aa10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 TTTY13Q9BZ97 58 aa10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
CSPG4P12-202ENST00000559989 A0A1B0GXF2 115 aa10.56□□□□□ -0.72
CSPG4P12-202ENST00000559989 TRBV7-6A0A0J9YX20 115 aa10.56□□□□□ -0.72
CSPG4P12-202ENST00000559989 CSDC2Q9Y534 153 aaKnown RBP10.56□□□□□ -0.72
CSPG4P12-202ENST00000559989 RNF185Q96GF1 192 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 KIAA1671Q9BY89 1806 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 TMEM89A2RUT3 159 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 EBI3Q14213 229 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 SLX1AQ9BQ83 275 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 IGFL3Q6UXB1 125 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 TRIAP1O43715 76 aa10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 C17orf82Q86X59 251 aaPredicted RBP10.55□□□□□ -0.72
CSPG4P12-202ENST00000559989 C2orf16Q68DN1 1984 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 PKDREJQ9NTG1 2253 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 PLXNB1O43157 2135 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 HILS1P60008 231 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 MED13Q9UHV7 2174 aa10.54□□□□□ -0.72
CSPG4P12-202ENST00000559989 C10orf25Q5T742 122 aa10.53□□□□□ -0.72
CSPG4P12-202ENST00000559989 LINC00308Q8TCZ7 52 aa10.53□□□□□ -0.72
CSPG4P12-202ENST00000559989 WDR90Q96KV7 1748 aa10.53□□□□□ -0.72
CSPG4P12-202ENST00000559989 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
CSPG4P12-202ENST00000559989 SMIM9A6NGZ8 99 aa10.52□□□□□ -0.73
CSPG4P12-202ENST00000559989 ODF3L1Q8IXM7 274 aa10.52□□□□□ -0.73
CSPG4P12-202ENST00000559989 X6R8D5 127 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 USF3Q68DE3 2245 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 M0QXV9 152 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 CEMP1Q6PRD7 247 aaPredicted RBP10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 LINC00467Q9BRT7 94 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 ADAMTS9Q9P2N4 1935 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 PRAC2D3DTV9 90 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 IGLV9-49A0A0B4J1Y8 123 aa10.51□□□□□ -0.73
CSPG4P12-202ENST00000559989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 ODF3Q96PU9 254 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 MRPS12O15235 138 aaKnown RBP10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 TRBV6-5A0A0K0K1A5 114 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 M0R378 163 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 PLA2G2AP14555 144 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 ESRGQ1W209 222 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 LY6LH3BQJ8 138 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 IGF1P05019 195 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 CFAP126Q5VTH2 177 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 DCANP1Q8TF63 244 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 XAGE1AQ9HD64 81 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 KIAA1549LQ6ZVL6 1849 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 LINC00322Q6ZN03 302 aaPredicted RBP10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 FAM167A-AS1Q96KT0 104 aa10.5□□□□□ -0.73
CSPG4P12-202ENST00000559989 ATG2AQ2TAZ0 1938 aa10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 C22orf34Q6ZV56 151 aa10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 NRACQ8N912 160 aa10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 RITA1Q96K30 269 aa10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 C1orf147Q96MC9 270 aaPredicted RBP10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 C6orf99Q4VX62 202 aa10.49□□□□□ -0.73
CSPG4P12-202ENST00000559989 MUC4Q99102 2169 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 AGRNO00468 2067 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 NEXN-AS1Q8NBZ9 246 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 MAP6D1Q9H9H5 199 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 CTSZQ9UBR2 303 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 LY6G6EA0A0G2JKS1 128 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 A0A0J9YX75 114 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 COX17Q14061 63 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 Q6JHZ5 121 aa10.48□□□□□ -0.73
CSPG4P12-202ENST00000559989 LINC00474Q9P2X8 69 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 IGKV2-28A0A075B6P5 120 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 IGKV2D-28P01615 120 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 DEFB131BA0A096LNP1 70 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 SOSTDC1Q6X4U4 206 aa10.47□□□□□ -0.73
CSPG4P12-202ENST00000559989 NUP210LQ5VU65 1888 aa10.46□□□□□ -0.73
CSPG4P12-202ENST00000559989 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
CSPG4P12-202ENST00000559989 Q6Q795 121 aa10.46□□□□□ -0.73
CSPG4P12-202ENST00000559989 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.46□□□□□ -0.74
CSPG4P12-202ENST00000559989 SYCNQ0VAF6 134 aa10.46□□□□□ -0.74
CSPG4P12-202ENST00000559989 Q8N976 141 aa10.46□□□□□ -0.74
CSPG4P12-202ENST00000559989 ZNF524Q96C55 264 aa10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 ZNF503-AS2A6NEH8 195 aa10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 IGLV3-1P01715 115 aa10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 SPTAN1Q13813 2472 aaKnown RBP10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 LOC107984640A0A0U1RRK4 108 aa10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.45□□□□□ -0.74
CSPG4P12-202ENST00000559989 C19orf71A6NCJ1 209 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 PSPHP1O15172 72 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 PCNX1Q96RV3 2341 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 PLAC8L1A1L4L8 177 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 A6NDX4 124 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 CDKN2A-AS1Q9UH64 79 aa10.44□□□□□ -0.74
CSPG4P12-202ENST00000559989 LINC00208Q96KT6 92 aa10.43□□□□□ -0.74
CSPG4P12-202ENST00000559989 IGLV4-3A0A075B6K6 122 aa10.43□□□□□ -0.74
CSPG4P12-202ENST00000559989 PRRC2AP48634 2157 aaKnown RBP10.43□□□□□ -0.74
CSPG4P12-202ENST00000559989 Q6ZQY7 126 aa10.43□□□□□ -0.74
CSPG4P12-202ENST00000559989 TRBV6-8A0A0A6YYG3 113 aa10.43□□□□□ -0.74
CSPG4P12-202ENST00000559989 LINC01548A6NM66 108 aa10.42□□□□□ -0.74
CSPG4P12-202ENST00000559989 IGLV4-69A0A075B6H9 119 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms