RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 OR2G3Q8NGZ4 309 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 SPACA4Q8TDM5 124 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 TVP23CQ96ET8 276 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 SGK494Q96LW2 274 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 NMES1Q9C002 83 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 LENEPQ9Y5L5 61 aa5.6□□□□□ -1.51
SNRPA1-208ENST00000559686 TGIF2-C20orf24A0A0A6YYL0 155 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 EIF5AP63241 154 aaKnown RBP5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 UBE2L3P68036 154 aaKnown RBP5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 GAGE2BQ13066 116 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 PEA15Q15121 130 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 GAGE2EQ4V326 116 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 GAGE2AQ6NT46 116 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 GOLT1AQ6ZVE7 132 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 TOMM5Q8N4H5 51 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 RNF185Q96GF1 192 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 C9orf85Q96MD7 179 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 SLC25A21Q9BQT8 299 aaPredicted RBP5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 WFDC1Q9HC57 220 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 PLAC8Q9NZF1 115 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 GAGE2DQ9UEU5 116 aa5.59□□□□□ -1.51
SNRPA1-208ENST00000559686 IGLV10-54A0A075B6I4 117 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 IGKV2-24A0A0C4DH68 120 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 COLCA2A8K830 154 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 RNASE3P12724 160 aaKnown RBP5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 ZNF80P51504 273 aaPredicted RBP5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 TMEM241Q24JQ0 296 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 PYDC2Q56P42 97 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 OCIAD2Q56VL3 154 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 AKR1C8PQ5T2L2 129 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 FAM74A4Q5TZK3 123 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 SPINK6Q6UWN8 80 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 BOD1L2Q8IYS8 172 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 LINC00479Q96M42 142 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 CHCHD7Q9BUK0 85 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 SPANXA1Q9NS26 97 aa5.58□□□□□ -1.52
SNRPA1-208ENST00000559686 IGSF23A1L1A6 192 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 A8MWV9 139 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 H7C1H1 209 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 TAAR5O14804 337 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 SNAI2O43623 268 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 MPC2O95563 127 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 GNG5P63218 68 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 PNRC1Q12796 327 aaPredicted RBP5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 COL5A1-AS1Q5SY13 56 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 ZFP2Q6ZN57 461 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 OR10G7Q8NGN6 311 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 CMTM2Q8TAZ6 248 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 THAP6Q8TBB0 222 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 NPCDR1Q9BY65 106 aa5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 ACTR3CQ9C0K3 210 aaPredicted RBP5.57□□□□□ -1.52
SNRPA1-208ENST00000559686 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 SSNA1O43805 119 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 SLPIP03973 132 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 S100A4P26447 101 aaKnown RBP5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 CNBPP62633 177 aaKnown RBP5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 COX6A2Q02221 97 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 PRR4Q16378 134 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 MIAQ16674 131 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 EIF5AL1Q6IS14 154 aaKnown RBP5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 STPG4Q8N801 248 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 PTH2Q96A98 100 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 CHCHD5Q9BSY4 110 aa5.56□□□□□ -1.52
SNRPA1-208ENST00000559686 GCGP01275 180 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 PMCHP20382 165 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 S100A10P60903 97 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 JOSD1Q15040 202 aaPredicted RBP5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 TMED6Q8WW62 240 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 MARVELD1Q9BSK0 173 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 NDFIP1Q9BT67 221 aa5.55□□□□□ -1.52
SNRPA1-208ENST00000559686 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 CCL25O15444 150 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 SULT1A1P50225 295 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 HBG1P69891 147 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 HBG2P69892 147 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 RPL36AP83881 106 aaKnown RBP5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 GAGE6Q13070 117 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 UFSP1Q6NVU6 142 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 TMEM252Q8N6L7 170 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 PRSS3P2Q8NHM4 247 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 RPL36ALQ969Q0 106 aaKnown RBP5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 SDHCQ99643 169 aaPredicted RBP5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 OTORQ9NRC9 128 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
SNRPA1-208ENST00000559686 FAM231BA6NCW3 169 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 H3BVH4 76 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 UBE2D3P61077 147 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 UBE2D2P62837 147 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 SRSF9Q13242 221 aaKnown RBP eCLIP5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 KRTAP5-3Q6L8H2 238 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 HIST1H2BAQ96A08 127 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 SEC11CQ9BY50 192 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 PRO1933Q9H354 126 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 CST9LQ9H4G1 147 aa5.53□□□□□ -1.52
SNRPA1-208ENST00000559686 C11orf1Q9H5F2 150 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms