RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 LINC00862A6NCI5 91 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 S100A8P05109 93 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 PMCHP20382 165 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 FUSP35637 526 aaKnown RBP eCLIP10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 RBX1P62877 108 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 PKD1P98161 4303 aa10.59□□□□□ -0.71
RABGGTA-206ENST00000558649 TRBV6-5A0A0K0K1A5 114 aa10.58□□□□□ -0.72
RABGGTA-206ENST00000558649 A0A1B0GXF2 115 aa10.58□□□□□ -0.72
RABGGTA-206ENST00000558649 I3L3M4 83 aa10.58□□□□□ -0.72
RABGGTA-206ENST00000558649 APCSP02743 223 aa10.58□□□□□ -0.72
RABGGTA-206ENST00000558649 SEC11CQ9BY50 192 aa10.58□□□□□ -0.72
RABGGTA-206ENST00000558649 BIRC6Q9NR09 4857 aa10.57□□□□□ -0.72
RABGGTA-206ENST00000558649 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
RABGGTA-206ENST00000558649 RMI2Q96E14 147 aa10.57□□□□□ -0.72
RABGGTA-206ENST00000558649 TMEM70Q9BUB7 260 aa10.57□□□□□ -0.72
RABGGTA-206ENST00000558649 TMEM242Q9NWH2 141 aa10.57□□□□□ -0.72
RABGGTA-206ENST00000558649 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 LECT2O14960 151 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 CKS2P33552 79 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 Q0VG73 95 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 ENHOQ6UWT2 76 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 LINC00269Q8N2A0 174 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 NRACQ8N912 160 aa10.56□□□□□ -0.72
RABGGTA-206ENST00000558649 TSHBP01222 138 aa10.55□□□□□ -0.72
RABGGTA-206ENST00000558649 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
RABGGTA-206ENST00000558649 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 LRCOL1A6NCL2 159 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 D6R8Y8 96 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 PPP1R17O96001 155 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 SUMO2P61956 95 aaKnown RBP10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 COX11Q9Y6N1 276 aa10.54□□□□□ -0.72
RABGGTA-206ENST00000558649 FCER1GP30273 86 aa10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 POLR2KP53803 58 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 C20orf203Q8NBC4 194 aa10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 BAALCQ8WXS3 180 aa10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 CTDSP1Q9GZU7 261 aa10.53□□□□□ -0.72
RABGGTA-206ENST00000558649 TRBV27A0A0K0K1C4 114 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 TNFRSF6BO95407 300 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 HLA-DQA1P01909 254 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 REG3AQ06141 175 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 WFDC2Q14508 124 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 MIAQ16674 131 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 MAPKAPK5-AS1Q8N8E1 139 aa10.52□□□□□ -0.73
RABGGTA-206ENST00000558649 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 A0A1B0GUV1 79 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 VCYO14598 125 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 NPYP01303 97 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 C10orf91Q5T1B1 145 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 Q8N814 137 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 CARHSP1Q9Y2V2 147 aaKnown RBP10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 PKHD1P08F94 4074 aa10.51□□□□□ -0.73
RABGGTA-206ENST00000558649 FGF6P10767 208 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 ORMDL3Q8N138 153 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 RPS10P5Q9NQ39 176 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 PGPEP1Q9NXJ5 209 aa10.5□□□□□ -0.73
RABGGTA-206ENST00000558649 C7orf77A4D0Y5 90 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 PPBPP02775 128 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 S100PP25815 95 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 CLRN3Q8NCR9 226 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 PRELID3AQ96N28 172 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 C20orf78Q9BR46 151 aa10.49□□□□□ -0.73
RABGGTA-206ENST00000558649 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 H7C423 109 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 APOC3P02656 99 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 ESDP10768 282 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 RHEBQ15382 184 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 CDPF1Q6NVV7 123 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 TMEM136Q6ZRR5 245 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 TMEM101Q96IK0 257 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
RABGGTA-206ENST00000558649 DNAH11Q96DT5 4516 aa10.47□□□□□ -0.73
RABGGTA-206ENST00000558649 ZNF25P17030 456 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-206ENST00000558649 NDUFA5Q16718 116 aa10.46□□□□□ -0.73
RABGGTA-206ENST00000558649 OR5A1Q8NGJ0 315 aa10.46□□□□□ -0.73
RABGGTA-206ENST00000558649 TRAV9-1A0A075B6T8 112 aa10.45□□□□□ -0.74
RABGGTA-206ENST00000558649 LOC389332A0A1B0GUA5 103 aa10.45□□□□□ -0.74
RABGGTA-206ENST00000558649 PHOX2AO14813 284 aa10.45□□□□□ -0.74
RABGGTA-206ENST00000558649 RPL32P62910 135 aaKnown RBP10.45□□□□□ -0.74
RABGGTA-206ENST00000558649 NTN5Q8WTR8 489 aaPredicted RBP10.45□□□□□ -0.74
RABGGTA-206ENST00000558649 TRAV8-4A0A0B4J246 113 aa10.44□□□□□ -0.74
RABGGTA-206ENST00000558649 TCAPO15273 167 aa10.44□□□□□ -0.74
RABGGTA-206ENST00000558649 USP17L23D6RBM5 183 aa10.43□□□□□ -0.74
RABGGTA-206ENST00000558649 GCSHP23434 173 aa10.43□□□□□ -0.74
RABGGTA-206ENST00000558649 DGAT2L7PQ6IED9 249 aa10.43□□□□□ -0.74
RABGGTA-206ENST00000558649 KRTAP26-1Q6PEX3 210 aa10.43□□□□□ -0.74
RABGGTA-206ENST00000558649 MAP1LC3AQ9H492 121 aa10.43□□□□□ -0.74
RABGGTA-206ENST00000558649 SNAPINO95295 136 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms