RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 IGHV3-33P01772 117 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 IGHV3-30-3P0DP02 117 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 IGHV3-30-5P0DP03 117 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 COTL1Q14019 142 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 LINC01556Q5JQF7 62 aa11.85□□□□□ -0.51
TPM1-214ENST00000558544 TRBV25-1A0A075B6N4 114 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 IGHV1-24A0A0C4DH33 117 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BKO60814 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 TNFRSF6BO95407 300 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BJP06899 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BOP23527 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BBP33778 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BDP58876 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BCP62807 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST2H2BEQ16778 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.84□□□□□ -0.51
TPM1-214ENST00000558544 ORMDL3Q8N138 153 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BHQ93079 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BNQ99877 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 HIST1H2BMQ99879 126 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 CHCHD5Q9BSY4 110 aa11.84□□□□□ -0.51
TPM1-214ENST00000558544 I3L3M4 83 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 NPYP01303 97 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 PPBPP02775 128 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 PMCHP20382 165 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
TPM1-214ENST00000558544 SUMO2P61956 95 aaKnown RBP11.83□□□□□ -0.52
TPM1-214ENST00000558544 IQCJQ1A5X6 159 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 NIT1Q86X76 327 aa11.83□□□□□ -0.52
TPM1-214ENST00000558544 TRAV9-2A0A087WT02 112 aa11.82□□□□□ -0.52
TPM1-214ENST00000558544 APCSP02743 223 aa11.82□□□□□ -0.52
TPM1-214ENST00000558544 KIAA1644Q3SXP7 199 aa11.82□□□□□ -0.52
TPM1-214ENST00000558544 PRELID3AQ96N28 172 aa11.82□□□□□ -0.52
TPM1-214ENST00000558544 DNAH17Q9UFH2 4485 aa11.81□□□□□ -0.52
TPM1-214ENST00000558544 TMEM262E9PQX1 116 aa11.81□□□□□ -0.52
TPM1-214ENST00000558544 AMTP48728 403 aa11.81□□□□□ -0.52
TPM1-214ENST00000558544 GAGE6Q13070 117 aa11.81□□□□□ -0.52
TPM1-214ENST00000558544 TMEM243Q9BU79 118 aa11.81□□□□□ -0.52
TPM1-214ENST00000558544 TRBV27A0A0K0K1C4 114 aa11.8□□□□□ -0.52
TPM1-214ENST00000558544 TSHBP01222 138 aa11.8□□□□□ -0.52
TPM1-214ENST00000558544 C10orf126Q8N4M7 172 aa11.8□□□□□ -0.52
TPM1-214ENST00000558544 C20orf78Q9BR46 151 aa11.8□□□□□ -0.52
TPM1-214ENST00000558544 A0A087WX48 190 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 VCYO14598 125 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 MPV17L2Q567V2 206 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 C1orf134Q5TEV5 83 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 C6orf223Q8N319 242 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 K7EP13 123 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 SMIM2Q9BVW6 85 aa11.79□□□□□ -0.52
TPM1-214ENST00000558544 UBE2L6O14933 153 aa11.78□□□□□ -0.52
TPM1-214ENST00000558544 PKIAP61925 76 aa11.78□□□□□ -0.52
TPM1-214ENST00000558544 RPL32P62910 135 aaKnown RBP11.78□□□□□ -0.52
TPM1-214ENST00000558544 CHCHD7Q9BUK0 85 aa11.78□□□□□ -0.52
TPM1-214ENST00000558544 LAMTOR2Q9Y2Q5 125 aa11.78□□□□□ -0.52
TPM1-214ENST00000558544 FAT2Q9NYQ8 4349 aa11.77□□□□□ -0.52
TPM1-214ENST00000558544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.77□□□□□ -0.53
TPM1-214ENST00000558544 IGKV2-29A2NJV5 120 aaPredicted RBP11.77□□□□□ -0.53
TPM1-214ENST00000558544 FCER1GP30273 86 aa11.77□□□□□ -0.53
TPM1-214ENST00000558544 NDUFA6P56556 154 aa11.77□□□□□ -0.53
TPM1-214ENST00000558544 Q8N976 141 aa11.77□□□□□ -0.53
TPM1-214ENST00000558544 KIR2DL4Q99706 377 aa11.77□□□□□ -0.53
TPM1-214ENST00000558544 IBA57-AS1B1ANH7 110 aa11.76□□□□□ -0.53
TPM1-214ENST00000558544 RTL8CO15255 209 aa11.76□□□□□ -0.53
TPM1-214ENST00000558544 ALKBH7Q9BT30 221 aaPredicted RBP11.76□□□□□ -0.53
TPM1-214ENST00000558544 MAP1LC3AQ9H492 121 aa11.76□□□□□ -0.53
TPM1-214ENST00000558544 LOC389332A0A1B0GUA5 103 aa11.75□□□□□ -0.53
TPM1-214ENST00000558544 RBX1P62877 108 aa11.75□□□□□ -0.53
TPM1-214ENST00000558544 Q9HAA7 133 aa11.75□□□□□ -0.53
TPM1-214ENST00000558544 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
TPM1-214ENST00000558544 LOC105371267A0A1B0GV96 52 aa11.74□□□□□ -0.53
TPM1-214ENST00000558544 C5orf52A6NGY3 159 aa11.74□□□□□ -0.53
TPM1-214ENST00000558544 S100A6P06703 90 aa11.74□□□□□ -0.53
TPM1-214ENST00000558544 ESDP10768 282 aa11.74□□□□□ -0.53
TPM1-214ENST00000558544 SNRPEP62304 92 aaKnown RBP11.74□□□□□ -0.53
TPM1-214ENST00000558544 ANGP03950 147 aaKnown RBP11.73□□□□□ -0.53
TPM1-214ENST00000558544 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
TPM1-214ENST00000558544 LAGE3Q14657 143 aa11.73□□□□□ -0.53
TPM1-214ENST00000558544 COA6Q5JTJ3 125 aaKnown RBP11.73□□□□□ -0.53
TPM1-214ENST00000558544 PRSS47A8MTI9 375 aa11.72□□□□□ -0.53
TPM1-214ENST00000558544 TCAPO15273 167 aa11.72□□□□□ -0.53
TPM1-214ENST00000558544 Q0VG73 95 aa11.72□□□□□ -0.53
TPM1-214ENST00000558544 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
TPM1-214ENST00000558544 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
TPM1-214ENST00000558544 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
TPM1-214ENST00000558544 H7C423 109 aa11.71□□□□□ -0.53
TPM1-214ENST00000558544 LINC00310P59036 64 aa11.71□□□□□ -0.53
TPM1-214ENST00000558544 AMMECR1LQ6DCA0 310 aa11.71□□□□□ -0.53
TPM1-214ENST00000558544 RNASEKQ6P5S7 137 aaKnown RBP11.71□□□□□ -0.53
TPM1-214ENST00000558544 Q6ZRN7 208 aaPredicted RBP11.71□□□□□ -0.53
TPM1-214ENST00000558544 NFE4Q86UQ8 179 aa11.71□□□□□ -0.53
TPM1-214ENST00000558544 A0A1B0GUV1 79 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 CRPP02741 224 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 FGF6P10767 208 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 CLPSL2Q6UWE3 100 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 Q8N8P6 123 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 C20orf203Q8NBC4 194 aa11.7□□□□□ -0.54
TPM1-214ENST00000558544 TRAV8-3A0A0A6YYJ7 113 aa11.69□□□□□ -0.54
TPM1-214ENST00000558544 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
TPM1-214ENST00000558544 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
TPM1-214ENST00000558544 IFI27P40305 119 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms