RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KRTAP26-1Q6PEX3 210 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 NUDT10Q8NFP7 164 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 NUDT11Q96G61 164 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 NIT2Q9NQR4 276 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 AP5S1Q9NUS5 200 aa10.01□□□□□ -0.81
TPM1-211ENST00000558314 TRAV26-2A0A0B4J265 109 aa10□□□□□ -0.81
TPM1-211ENST00000558314 PANO1I0J062 215 aa10□□□□□ -0.81
TPM1-211ENST00000558314 SMIM12Q96EX1 92 aa10□□□□□ -0.81
TPM1-211ENST00000558314 RNASE7Q9H1E1 156 aaKnown RBP10□□□□□ -0.81
TPM1-211ENST00000558314 WDR73Q6P4I2 378 aa9.99□□□□□ -0.81
TPM1-211ENST00000558314 CLRN3Q8NCR9 226 aa9.99□□□□□ -0.81
TPM1-211ENST00000558314 TRAV8-4A0A0B4J246 113 aa9.98□□□□□ -0.81
TPM1-211ENST00000558314 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
TPM1-211ENST00000558314 RPP21Q9H633 154 aaKnown RBP9.98□□□□□ -0.81
TPM1-211ENST00000558314 GAGE12HA6NDE8 117 aa9.97□□□□□ -0.81
TPM1-211ENST00000558314 OXTP01178 125 aa9.97□□□□□ -0.81
TPM1-211ENST00000558314 HNRNPA3P51991 378 aaKnown RBP9.97□□□□□ -0.81
TPM1-211ENST00000558314 CEBPGP53567 150 aa9.97□□□□□ -0.81
TPM1-211ENST00000558314 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
TPM1-211ENST00000558314 IGHV3-64A0A075B6Q5 118 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.96□□□□□ -0.82
TPM1-211ENST00000558314 A0A1B0GUV1 79 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 CHTF8P0CG12 524 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 CTRLP40313 264 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 RNASEKQ6P5S7 137 aaKnown RBP9.96□□□□□ -0.82
TPM1-211ENST00000558314 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 GATD1Q8NB37 220 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 OCC1Q8TAD7 63 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 RPL39LQ96EH5 51 aaKnown RBP9.96□□□□□ -0.82
TPM1-211ENST00000558314 PGLYRP4Q96LB8 373 aa9.96□□□□□ -0.82
TPM1-211ENST00000558314 LRP1Q07954 4544 aaKnown RBP9.95□□□□□ -0.82
TPM1-211ENST00000558314 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.95□□□□□ -0.82
TPM1-211ENST00000558314 IGKV2-29A2NJV5 120 aaPredicted RBP9.95□□□□□ -0.82
TPM1-211ENST00000558314 K7EN84 100 aa9.95□□□□□ -0.82
TPM1-211ENST00000558314 FOXA3P55318 350 aaPredicted RBP9.95□□□□□ -0.82
TPM1-211ENST00000558314 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
TPM1-211ENST00000558314 SERTAD4-AS1Q5TG53 156 aa9.95□□□□□ -0.82
TPM1-211ENST00000558314 CNBPP62633 177 aaKnown RBP9.94□□□□□ -0.82
TPM1-211ENST00000558314 GATCO43716 136 aaKnown RBP9.93□□□□□ -0.82
TPM1-211ENST00000558314 APCSP02743 223 aa9.93□□□□□ -0.82
TPM1-211ENST00000558314 SLPIP03973 132 aa9.92□□□□□ -0.82
TPM1-211ENST00000558314 TAGLN2P37802 199 aaKnown RBP9.92□□□□□ -0.82
TPM1-211ENST00000558314 BLOC1S1P78537 153 aa9.92□□□□□ -0.82
TPM1-211ENST00000558314 CFAP161Q6P656 301 aa9.92□□□□□ -0.82
TPM1-211ENST00000558314 A0A087WYN8 130 aa9.91□□□□□ -0.82
TPM1-211ENST00000558314 PMCHP20382 165 aa9.91□□□□□ -0.82
TPM1-211ENST00000558314 ALKAL2Q6UX46 152 aa9.91□□□□□ -0.82
TPM1-211ENST00000558314 GTSF1Q8WW33 167 aa9.91□□□□□ -0.82
TPM1-211ENST00000558314 CHCHD10Q8WYQ3 142 aaPredicted RBP9.91□□□□□ -0.82
TPM1-211ENST00000558314 PLA2G2DQ9UNK4 145 aa9.91□□□□□ -0.82
TPM1-211ENST00000558314 IGKV2-24A0A0C4DH68 120 aa9.9□□□□□ -0.82
TPM1-211ENST00000558314 SDHAF1A6NFY7 115 aa9.9□□□□□ -0.82
TPM1-211ENST00000558314 COX6A2Q02221 97 aa9.9□□□□□ -0.82
TPM1-211ENST00000558314 C15orf56Q8N910 161 aa9.9□□□□□ -0.82
TPM1-211ENST00000558314 FGF6P10767 208 aa9.89□□□□□ -0.83
TPM1-211ENST00000558314 MAJINQ3KP22 176 aa9.89□□□□□ -0.83
TPM1-211ENST00000558314 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
TPM1-211ENST00000558314 CNFNQ9BYD5 112 aa9.89□□□□□ -0.83
TPM1-211ENST00000558314 FAT3Q8TDW7 4589 aa9.89□□□□□ -0.83
TPM1-211ENST00000558314 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
TPM1-211ENST00000558314 SPACA4Q8TDM5 124 aa9.88□□□□□ -0.83
TPM1-211ENST00000558314 TMEM101Q96IK0 257 aa9.88□□□□□ -0.83
TPM1-211ENST00000558314 BTF3L4Q96K17 158 aa9.88□□□□□ -0.83
TPM1-211ENST00000558314 A8MWL6 223 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 NCR2O95944 276 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 XCL1P47992 114 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 TEX261Q6UWH6 196 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 LYPD6BQ8NI32 183 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
TPM1-211ENST00000558314 I3L3M4 83 aa9.86□□□□□ -0.83
TPM1-211ENST00000558314 PHOX2AO14813 284 aa9.86□□□□□ -0.83
TPM1-211ENST00000558314 GAS8-AS1O95177 125 aa9.86□□□□□ -0.83
TPM1-211ENST00000558314 CIRBPQ14011 172 aaKnown RBP9.86□□□□□ -0.83
TPM1-211ENST00000558314 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
TPM1-211ENST00000558314 C7orf33Q8WU49 177 aa9.86□□□□□ -0.83
TPM1-211ENST00000558314 EIF5A2Q9GZV4 153 aaKnown RBP9.86□□□□□ -0.83
TPM1-211ENST00000558314 TMEM250H0YL14 139 aa9.85□□□□□ -0.83
TPM1-211ENST00000558314 OR5A1Q8NGJ0 315 aa9.85□□□□□ -0.83
TPM1-211ENST00000558314 LINC00526Q96FQ7 95 aa9.85□□□□□ -0.83
TPM1-211ENST00000558314 RNF185Q96GF1 192 aa9.85□□□□□ -0.83
TPM1-211ENST00000558314 ST20Q9HBF5 79 aa9.85□□□□□ -0.83
TPM1-211ENST00000558314 H7C423 109 aa9.84□□□□□ -0.83
TPM1-211ENST00000558314 NDUFS6O75380 124 aaKnown RBP9.84□□□□□ -0.83
TPM1-211ENST00000558314 FAM231DQ6ZW35 169 aa9.84□□□□□ -0.83
TPM1-211ENST00000558314 STPG4Q8N801 248 aa9.84□□□□□ -0.83
TPM1-211ENST00000558314 SMIM7Q9BQ49 75 aa9.84□□□□□ -0.83
TPM1-211ENST00000558314 HMCN2Q8NDA2 5059 aa9.83□□□□□ -0.84
TPM1-211ENST00000558314 CCL25O15444 150 aa9.83□□□□□ -0.84
TPM1-211ENST00000558314 FOXI1Q12951 378 aa9.83□□□□□ -0.84
TPM1-211ENST00000558314 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
TPM1-211ENST00000558314 LINC00959A0A1B0GUT2 108 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 A0A1B0GUT8 65 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 FAM231BA6NCW3 169 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 HIGD1CA8MV81 97 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 SMKR1H3BMG3 65 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 TSHBP01222 138 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 ZNF25P17030 456 aaPredicted RBP9.82□□□□□ -0.84
TPM1-211ENST00000558314 Q6ZRU5 148 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
TPM1-211ENST00000558314 PKHD1L1Q86WI1 4243 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms