RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 RPL39LQ96EH5 51 aaKnown RBP9.27□□□□□ -0.93
SHMT2-234ENST00000557703 KIR2DL4Q99706 377 aa9.27□□□□□ -0.93
SHMT2-234ENST00000557703 CHCHD5Q9BSY4 110 aa9.27□□□□□ -0.93
SHMT2-234ENST00000557703 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
SHMT2-234ENST00000557703 TMEM262E9PQX1 116 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 HLA-DQA1P01909 254 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 MT-ND6P03923 174 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 Q0VG73 95 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 TMEM136Q6ZRR5 245 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 NRACQ8N912 160 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 RMI2Q96E14 147 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 GNB1LQ9BYB4 327 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 KRTAP1-5Q9BYS1 174 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 HYDINQ4G0P3 5121 aa9.26□□□□□ -0.93
SHMT2-234ENST00000557703 PRSS47A8MTI9 375 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 UBE2L6O14933 153 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 RTL8CO15255 209 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 APCSP02743 223 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 AMTP48728 403 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 TM2D2Q9BX73 214 aa9.25□□□□□ -0.93
SHMT2-234ENST00000557703 D6R8Y8 96 aa9.24□□□□□ -0.93
SHMT2-234ENST00000557703 TNFRSF6BO95407 300 aa9.24□□□□□ -0.93
SHMT2-234ENST00000557703 RPS10P46783 165 aaKnown RBP9.24□□□□□ -0.93
SHMT2-234ENST00000557703 K7EMI3 77 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 IGHV3-30P01768 117 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 IGHV3-33P01772 117 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 IGHV3-30-3P0DP02 117 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 IGHV3-30-5P0DP03 117 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 ZNF25P17030 456 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-234ENST00000557703 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 PRELID3AQ96N28 172 aa9.23□□□□□ -0.93
SHMT2-234ENST00000557703 PRSS29PA6NIE9 313 aa9.22□□□□□ -0.93
SHMT2-234ENST00000557703 FCER1GP30273 86 aa9.22□□□□□ -0.93
SHMT2-234ENST00000557703 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
SHMT2-234ENST00000557703 GAS8-AS1O95177 125 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 ESDP10768 282 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 RBX1P62877 108 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 MIAQ16674 131 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 Q6ZRN7 208 aaPredicted RBP9.21□□□□□ -0.94
SHMT2-234ENST00000557703 SMIM2Q9BVW6 85 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 PRR34Q9NV39 138 aa9.21□□□□□ -0.94
SHMT2-234ENST00000557703 SMKR1H3BMG3 65 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 EREGO14944 169 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 TSHBP01222 138 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 CRPP02741 224 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 ANGP03950 147 aaKnown RBP9.2□□□□□ -0.94
SHMT2-234ENST00000557703 G0S2P27469 103 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 SLC7A5P1Q8MH63 180 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 KLK12Q9UKR0 248 aa9.2□□□□□ -0.94
SHMT2-234ENST00000557703 CSDC2Q9Y534 153 aaKnown RBP9.2□□□□□ -0.94
SHMT2-234ENST00000557703 TRAV8-4A0A0B4J246 113 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 RAB5AP20339 215 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 GAGE6Q13070 117 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 AMMECR1LQ6DCA0 310 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 MRPL52Q86TS9 123 aaKnown RBP9.19□□□□□ -0.94
SHMT2-234ENST00000557703 TMEM101Q96IK0 257 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 NXT2Q9NPJ8 142 aaKnown RBP9.19□□□□□ -0.94
SHMT2-234ENST00000557703 SMCO4Q9NRQ5 59 aa9.19□□□□□ -0.94
SHMT2-234ENST00000557703 PSCAO43653 123 aa9.18□□□□□ -0.94
SHMT2-234ENST00000557703 NPYP01303 97 aa9.18□□□□□ -0.94
SHMT2-234ENST00000557703 TIMM21Q9BVV7 248 aa9.18□□□□□ -0.94
SHMT2-234ENST00000557703 LINC01549A6NIU2 74 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 FGF6P10767 208 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 Q8N976 141 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 UBE2WQ96B02 151 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 C1orf43Q9BWL3 253 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 FRAS1Q86XX4 4008 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 DNAH2Q9P225 4427 aa9.17□□□□□ -0.94
SHMT2-234ENST00000557703 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
SHMT2-234ENST00000557703 CCL25O15444 150 aa9.16□□□□□ -0.94
SHMT2-234ENST00000557703 Q8N8P6 123 aa9.16□□□□□ -0.94
SHMT2-234ENST00000557703 C20orf203Q8NBC4 194 aa9.16□□□□□ -0.94
SHMT2-234ENST00000557703 Q9HAA7 133 aa9.16□□□□□ -0.94
SHMT2-234ENST00000557703 REG3AQ06141 175 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 ORMDL2Q53FV1 153 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 ENHOQ6UWT2 76 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 LINC00269Q8N2A0 174 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 Q8N3U1 123 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 OR5A1Q8NGJ0 315 aa9.15□□□□□ -0.94
SHMT2-234ENST00000557703 A0A1B0GVY2 172 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 NPSP0C0P6 89 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 TNP2Q05952 138 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 FABP9Q0Z7S8 132 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 CDPF1Q6NVV7 123 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 RNASEKQ6P5S7 137 aaKnown RBP9.14□□□□□ -0.95
SHMT2-234ENST00000557703 MRPL18Q9H0U6 180 aaKnown RBP9.14□□□□□ -0.95
SHMT2-234ENST00000557703 SPANXA1Q9NS26 97 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 PGPEP1Q9NXJ5 209 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 TRAPPC1Q9Y5R8 145 aa9.14□□□□□ -0.95
SHMT2-234ENST00000557703 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 IGKV2D-24A0A075B6R9 120 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-234ENST00000557703 TGIF2-C20orf24A0A0A6YYL0 155 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-234ENST00000557703 YPEL4Q96NS1 127 aa9.13□□□□□ -0.95
SHMT2-234ENST00000557703 ALKBH7Q9BT30 221 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-234ENST00000557703 CDC42SE2Q9NRR3 84 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms