RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 UPK3BQ9BT76 320 aa11.91□□□□□ -0.5
TUBB3-211ENST00000556536 SMIM2Q9BVW6 85 aa11.91□□□□□ -0.5
TUBB3-211ENST00000556536 PRSS47A8MTI9 375 aa11.9□□□□□ -0.5
TUBB3-211ENST00000556536 COTL1Q14019 142 aa11.9□□□□□ -0.5
TUBB3-211ENST00000556536 MAP1LC3AQ9H492 121 aa11.9□□□□□ -0.5
TUBB3-211ENST00000556536 PCLOQ9Y6V0 5065 aa11.9□□□□□ -0.5
TUBB3-211ENST00000556536 IGLV2-18A0A075B6J9 118 aa11.89□□□□□ -0.51
TUBB3-211ENST00000556536 TMEM97Q5BJF2 176 aa11.89□□□□□ -0.51
TUBB3-211ENST00000556536 HERC2O95714 4834 aa11.89□□□□□ -0.51
TUBB3-211ENST00000556536 TRAV8-6A0A0B4J262 113 aa11.88□□□□□ -0.51
TUBB3-211ENST00000556536 IGHV1-24A0A0C4DH33 117 aa11.88□□□□□ -0.51
TUBB3-211ENST00000556536 IQCJQ1A5X6 159 aa11.88□□□□□ -0.51
TUBB3-211ENST00000556536 DNAH6Q9C0G6 4158 aa11.88□□□□□ -0.51
TUBB3-211ENST00000556536 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
TUBB3-211ENST00000556536 TCAPO15273 167 aa11.87□□□□□ -0.51
TUBB3-211ENST00000556536 AMTP48728 403 aa11.87□□□□□ -0.51
TUBB3-211ENST00000556536 KIR2DL4Q99706 377 aa11.87□□□□□ -0.51
TUBB3-211ENST00000556536 Q9H8V8 135 aa11.87□□□□□ -0.51
TUBB3-211ENST00000556536 FCER1GP30273 86 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 IFI27P40305 119 aaPredicted RBP11.86□□□□□ -0.51
TUBB3-211ENST00000556536 Q8N3U1 123 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 Q8N8P6 123 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 CHCHD5Q9BSY4 110 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 CHCHD7Q9BUK0 85 aa11.86□□□□□ -0.51
TUBB3-211ENST00000556536 FRAS1Q86XX4 4008 aa11.85□□□□□ -0.51
TUBB3-211ENST00000556536 SIVA1O15304 175 aa11.85□□□□□ -0.51
TUBB3-211ENST00000556536 GAGE6Q13070 117 aa11.85□□□□□ -0.51
TUBB3-211ENST00000556536 C18orf32Q8TCD1 76 aa11.85□□□□□ -0.51
TUBB3-211ENST00000556536 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-211ENST00000556536 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
TUBB3-211ENST00000556536 ESDP10768 282 aa11.84□□□□□ -0.51
TUBB3-211ENST00000556536 NIT1Q86X76 327 aa11.84□□□□□ -0.51
TUBB3-211ENST00000556536 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
TUBB3-211ENST00000556536 DNAH10OSP0CZ25 163 aa11.83□□□□□ -0.52
TUBB3-211ENST00000556536 PRSS3P2Q8NHM4 247 aa11.83□□□□□ -0.52
TUBB3-211ENST00000556536 KMT2AQ03164 3969 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 IGHV3-30P01768 117 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 IGHV3-30-3P0DP02 117 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 IGHV3-30-5P0DP03 117 aa11.82□□□□□ -0.52
TUBB3-211ENST00000556536 MPV17L2Q567V2 206 aa11.81□□□□□ -0.52
TUBB3-211ENST00000556536 LINC01556Q5JQF7 62 aa11.81□□□□□ -0.52
TUBB3-211ENST00000556536 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
TUBB3-211ENST00000556536 UBE2L6O14933 153 aa11.8□□□□□ -0.52
TUBB3-211ENST00000556536 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
TUBB3-211ENST00000556536 A0A087WX48 190 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 LINC01546A6NGU7 62 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 M0R2N4 97 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 RBX1P62877 108 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 LAGE3Q14657 143 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 FA2HQ7L5A8 372 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 Q8N976 141 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 C20orf203Q8NBC4 194 aa11.79□□□□□ -0.52
TUBB3-211ENST00000556536 NBDYA0A0U1RRE5 68 aa11.78□□□□□ -0.52
TUBB3-211ENST00000556536 RPL39P62891 51 aaKnown RBP11.78□□□□□ -0.52
TUBB3-211ENST00000556536 H7C423 109 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 K7EMI3 77 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 FGF6P10767 208 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 PKIAP61925 76 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 Q0VG73 95 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 ORMDL2Q53FV1 153 aa11.77□□□□□ -0.53
TUBB3-211ENST00000556536 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
TUBB3-211ENST00000556536 IGLV4-60A0A075B6I1 120 aa11.76□□□□□ -0.53
TUBB3-211ENST00000556536 LINC00614P0C842 121 aa11.76□□□□□ -0.53
TUBB3-211ENST00000556536 RNASEKQ6P5S7 137 aaKnown RBP11.76□□□□□ -0.53
TUBB3-211ENST00000556536 Q6ZR54 194 aa11.76□□□□□ -0.53
TUBB3-211ENST00000556536 RYR1P21817 5038 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BKO60814 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BJP06899 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BOP23527 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BBP33778 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BDP58876 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BCP62807 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST2H2BEQ16778 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-211ENST00000556536 AMMECR1LQ6DCA0 310 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 MRPL52Q86TS9 123 aaKnown RBP11.75□□□□□ -0.53
TUBB3-211ENST00000556536 BAGE3Q86Y29 109 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BHQ93079 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BNQ99877 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 HIST1H2BMQ99879 126 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
TUBB3-211ENST00000556536 TRAV9-2A0A087WT02 112 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 A0A1B0GUV1 79 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 RAB5BP61020 215 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 TTC32Q5I0X7 151 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 AP5S1Q9NUS5 200 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 UBE2D4Q9Y2X8 147 aa11.74□□□□□ -0.53
TUBB3-211ENST00000556536 C1orf196B1AJZ1 125 aa11.73□□□□□ -0.53
TUBB3-211ENST00000556536 ANGP03950 147 aaKnown RBP11.73□□□□□ -0.53
TUBB3-211ENST00000556536 BTF3P20290 206 aaKnown RBP11.73□□□□□ -0.53
TUBB3-211ENST00000556536 LINC00310P59036 64 aa11.73□□□□□ -0.53
TUBB3-211ENST00000556536 C2orf66Q6UXQ4 117 aa11.73□□□□□ -0.53
TUBB3-211ENST00000556536 TMEM18Q96B42 140 aa11.73□□□□□ -0.53
TUBB3-211ENST00000556536 IBA57-AS1B1ANH7 110 aa11.72□□□□□ -0.53
TUBB3-211ENST00000556536 K7EP13 123 aa11.72□□□□□ -0.53
TUBB3-211ENST00000556536 ZNF25P17030 456 aaPredicted RBP11.72□□□□□ -0.53
TUBB3-211ENST00000556536 PMCHL1Q16048 86 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms