RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 CKS2P33552 79 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 LAGE3Q14657 143 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 RHEBQ15382 184 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 IQCJQ1A5X6 159 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 NIT1Q86X76 327 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 AMN1Q8IY45 258 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 TM2D2Q9BX73 214 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 CARHSP1Q9Y2V2 147 aaKnown RBP7.19□□□□□ -1.26
TMEM260-206ENST00000555046 COX11Q9Y6N1 276 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
TMEM260-206ENST00000555046 SRRM2Q9UQ35 2752 aaKnown RBP7.18□□□□□ -1.26
TMEM260-206ENST00000555046 SDHAF1A6NFY7 115 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 I3L3M4 83 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 UBE2L6O14933 153 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 TCAPO15273 167 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 IGHV3-30P01768 117 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 IGHV3-33P01772 117 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 IGHV3-30-5P0DP03 117 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 ADCYAP1P18509 176 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 Q0VG73 95 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 MRPL54Q6P161 138 aaKnown RBP7.18□□□□□ -1.26
TMEM260-206ENST00000555046 SVBPQ8N300 66 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 RMI2Q96E14 147 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 RNF185Q96GF1 192 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 TMEM243Q9BU79 118 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 PKD1P98161 4303 aa7.18□□□□□ -1.26
TMEM260-206ENST00000555046 A0A1B0GXF2 115 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 H7C423 109 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 PHOX2AO14813 284 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 EREGO14944 169 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 RTL8CO15255 209 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 SNAPINO95295 136 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 COX19Q49B96 90 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 KIR2DL4Q99706 377 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 RPS10P5Q9NQ39 176 aa7.17□□□□□ -1.26
TMEM260-206ENST00000555046 TRBV24-1A0A075B6N3 115 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 C7orf77A4D0Y5 90 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 APOC3P02656 99 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 AMTP48728 403 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 SMAGPQ0VAQ4 97 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 MRPL51Q4U2R6 128 aaKnown RBP7.16□□□□□ -1.26
TMEM260-206ENST00000555046 NTM-AS1Q6ZSK4 140 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 CLRN3Q8NCR9 226 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 RPL39LQ96EH5 51 aaKnown RBP7.16□□□□□ -1.26
TMEM260-206ENST00000555046 KRTAP1-5Q9BYS1 174 aa7.16□□□□□ -1.26
TMEM260-206ENST00000555046 TRBV27A0A0K0K1C4 114 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 A0A1B0GUV1 79 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 PSCAO43653 123 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 APCSP02743 223 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 POLR2KP53803 58 aaKnown RBP7.15□□□□□ -1.26
TMEM260-206ENST00000555046 SUMO2P61956 95 aaKnown RBP7.15□□□□□ -1.26
TMEM260-206ENST00000555046 TMEM136Q6ZRR5 245 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 ORMDL3Q8N138 153 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 TMEM70Q9BUB7 260 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 LAMTOR2Q9Y2Q5 125 aa7.15□□□□□ -1.26
TMEM260-206ENST00000555046 MYCBP2O75592 4640 aa7.15□□□□□ -1.27
TMEM260-206ENST00000555046 CRPP02741 224 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 ANGP03950 147 aaKnown RBP7.14□□□□□ -1.27
TMEM260-206ENST00000555046 FCER1GP30273 86 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 RPL32P62910 135 aaKnown RBP7.14□□□□□ -1.27
TMEM260-206ENST00000555046 AMMECR1LQ6DCA0 310 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 ATRAIDQ6UW56 229 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 TMEM18Q96B42 140 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 KLK12Q9UKR0 248 aa7.14□□□□□ -1.27
TMEM260-206ENST00000555046 APOBP04114 4563 aaKnown RBP7.13□□□□□ -1.27
TMEM260-206ENST00000555046 D6R8Y8 96 aa7.13□□□□□ -1.27
TMEM260-206ENST00000555046 TNFRSF6BO95407 300 aa7.13□□□□□ -1.27
TMEM260-206ENST00000555046 GAGE6Q13070 117 aa7.13□□□□□ -1.27
TMEM260-206ENST00000555046 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 SMKR1H3BMG3 65 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 HLA-DQA1P01909 254 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 ZNF25P17030 456 aaPredicted RBP7.12□□□□□ -1.27
TMEM260-206ENST00000555046 RAB5AP20339 215 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 RPS10P46783 165 aaKnown RBP7.12□□□□□ -1.27
TMEM260-206ENST00000555046 RBX1P62877 108 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 MIAQ16674 131 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 NRACQ8N912 160 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 UBE2WQ96B02 151 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 TMEM101Q96IK0 257 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 PRELID3AQ96N28 172 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 GNB1LQ9BYB4 327 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 Q9HAA7 133 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 PGPEP1Q9NXJ5 209 aa7.12□□□□□ -1.27
TMEM260-206ENST00000555046 TRAV8-4A0A0B4J246 113 aa7.11□□□□□ -1.27
TMEM260-206ENST00000555046 MT-ND6P03923 174 aa7.11□□□□□ -1.27
TMEM260-206ENST00000555046 TNP2Q05952 138 aa7.11□□□□□ -1.27
TMEM260-206ENST00000555046 MPV17L2Q567V2 206 aa7.11□□□□□ -1.27
TMEM260-206ENST00000555046 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
TMEM260-206ENST00000555046 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
TMEM260-206ENST00000555046 PRSS47A8MTI9 375 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 GAS8-AS1O95177 125 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 G0S2P27469 103 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 DGAT2L7PQ6IED9 249 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 RNASEKQ6P5S7 137 aaKnown RBP7.1□□□□□ -1.27
TMEM260-206ENST00000555046 LINC00269Q8N2A0 174 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 Q8N976 141 aa7.1□□□□□ -1.27
TMEM260-206ENST00000555046 C1orf43Q9BWL3 253 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms