RNA–Protein interactions for RNA: ENST00000554913.5

XRCC3-209, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene XRCC3, Length 2,539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-209ENST00000554913 POLQO75417 2590 aa12.15□□□□□ -0.46
XRCC3-209ENST00000554913 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-209ENST00000554913 KNCNA6PVL3 124 aa12.15□□□□□ -0.46
XRCC3-209ENST00000554913 NBPF19A0A087WUL8 3843 aa12.14□□□□□ -0.47
XRCC3-209ENST00000554913 PRSS2P07478 247 aa12.14□□□□□ -0.47
XRCC3-209ENST00000554913 CLUHP3Q96NS8 147 aa12.14□□□□□ -0.47
XRCC3-209ENST00000554913 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
XRCC3-209ENST00000554913 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
XRCC3-209ENST00000554913 A8MZ25 164 aa12.13□□□□□ -0.47
XRCC3-209ENST00000554913 PYGO1Q9Y3Y4 419 aa12.13□□□□□ -0.47
XRCC3-209ENST00000554913 USP9YO00507 2555 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-209ENST00000554913 B4DSR2 109 aa12.13□□□□□ -0.47
XRCC3-209ENST00000554913 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
XRCC3-209ENST00000554913 NTN5Q8WTR8 489 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-209ENST00000554913 ZANQ9Y493 2812 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 TRIAP1O43715 76 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-209ENST00000554913 TMEM262E9PQX1 116 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 HOXD3P31249 432 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-209ENST00000554913 ATXN8Q156A1 80 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 Q5PR19 223 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 Q6ZSN1 163 aa12.12□□□□□ -0.47
XRCC3-209ENST00000554913 M0QXV9 152 aa12.11□□□□□ -0.47
XRCC3-209ENST00000554913 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
XRCC3-209ENST00000554913 NPC2P61916 151 aa12.11□□□□□ -0.47
XRCC3-209ENST00000554913 Q6ZSV7 163 aa12.11□□□□□ -0.47
XRCC3-209ENST00000554913 NDUFA12Q9UI09 145 aa12.11□□□□□ -0.47
XRCC3-209ENST00000554913 UBR5O95071 2799 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-209ENST00000554913 IGHV1-58A0A0C4DH39 117 aa12.1□□□□□ -0.47
XRCC3-209ENST00000554913 NACAE9PAV3 2078 aa12.1□□□□□ -0.47
XRCC3-209ENST00000554913 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
XRCC3-209ENST00000554913 NRGNQ92686 78 aa12.1□□□□□ -0.47
XRCC3-209ENST00000554913 TRBV30A0A0K0K1B3 111 aa12.1□□□□□ -0.47
XRCC3-209ENST00000554913 DEFB131AP59861 70 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 RNF183Q96D59 192 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 EDA2RQ9HAV5 297 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.09□□□□□ -0.47
XRCC3-209ENST00000554913 TEX49A0A1B0GTD5 131 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 IGKV2-29A2NJV5 120 aaPredicted RBP12.09□□□□□ -0.47
XRCC3-209ENST00000554913 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
XRCC3-209ENST00000554913 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
XRCC3-209ENST00000554913 RBMY1BA6NDE4 496 aaKnown RBP12.08□□□□□ -0.48
XRCC3-209ENST00000554913 RBMY1EA6NEQ0 496 aaKnown RBP12.08□□□□□ -0.48
XRCC3-209ENST00000554913 RBMY1DP0C7P1 496 aaKnown RBP12.08□□□□□ -0.48
XRCC3-209ENST00000554913 DUX3Q96PT4 197 aa12.08□□□□□ -0.48
XRCC3-209ENST00000554913 ZFAND6Q6FIF0 208 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 CITED1Q99966 193 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 UBE2D4Q9Y2X8 147 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 PTPN13Q12923 2485 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 IGHV3-38A0A0C4DH36 116 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 DEFB136Q30KP8 78 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 ICOSQ9Y6W8 199 aa12.07□□□□□ -0.48
XRCC3-209ENST00000554913 TRBV10-2A0A0K0K1G8 114 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 C18orf65Q6ZTR6 163 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 ZNF469Q96JG9 3925 aaPredicted RBP12.06□□□□□ -0.48
XRCC3-209ENST00000554913 ABCA12Q86UK0 2595 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 TINCRA0A1B0GVN0 87 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 H3BMM0 161 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 GATA3P23771 443 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 MIAQ16674 131 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 TEX29Q8N6K0 151 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 LINC00467Q9BRT7 94 aa12.06□□□□□ -0.48
XRCC3-209ENST00000554913 SLURP1P55000 103 aa12.05□□□□□ -0.48
XRCC3-209ENST00000554913 CRLF1O75462 422 aa12.05□□□□□ -0.48
XRCC3-209ENST00000554913 ANAPC13Q9BS18 74 aa12.05□□□□□ -0.48
XRCC3-209ENST00000554913 DAND5Q8N907 189 aa12.04□□□□□ -0.48
XRCC3-209ENST00000554913 UBE2E2Q96LR5 201 aa12.04□□□□□ -0.48
XRCC3-209ENST00000554913 SPANXA1Q9NS26 97 aa12.04□□□□□ -0.48
XRCC3-209ENST00000554913 ANKRD17O75179 2603 aaKnown RBP12.04□□□□□ -0.48
XRCC3-209ENST00000554913 TRAV4A0A0B4J268 109 aa12.04□□□□□ -0.48
XRCC3-209ENST00000554913 CLEC2BQ92478 149 aa12.04□□□□□ -0.48
XRCC3-209ENST00000554913 H7C423 109 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 C2orf82Q6UX34 121 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 MXRA5Q9NR99 2828 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 RPL13AP40429 203 aaKnown RBP12.03□□□□□ -0.48
XRCC3-209ENST00000554913 ZNF702PQ9H963 129 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 CDKN2A-AS1Q9UH64 79 aa12.03□□□□□ -0.48
XRCC3-209ENST00000554913 ZNF415Q09FC8 603 aa12.02□□□□□ -0.49
XRCC3-209ENST00000554913 LINC01356Q8N9X3 169 aa12.02□□□□□ -0.49
XRCC3-209ENST00000554913 UBE2WQ96B02 151 aa12.02□□□□□ -0.49
XRCC3-209ENST00000554913 VPREB3Q9UKI3 123 aa12.02□□□□□ -0.49
XRCC3-209ENST00000554913 SNCGO76070 127 aa12.01□□□□□ -0.49
XRCC3-209ENST00000554913 TMEM61Q8N0U2 210 aa12.01□□□□□ -0.49
XRCC3-209ENST00000554913 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.01□□□□□ -0.49
XRCC3-209ENST00000554913 CHD6Q8TD26 2715 aa12.01□□□□□ -0.49
XRCC3-209ENST00000554913 TRAV8-4A0A0B4J246 113 aa12.01□□□□□ -0.49
XRCC3-209ENST00000554913 A8MTW9 85 aa12.01□□□□□ -0.49
XRCC3-209ENST00000554913 GAGE2BQ13066 116 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 GAGE2EQ4V326 116 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 LINC01587Q99440 93 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 GAGE2DQ9UEU5 116 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 COX6CP09669 75 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 C11orf72Q8NBR9 251 aa12□□□□□ -0.49
XRCC3-209ENST00000554913 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
XRCC3-209ENST00000554913 NHLRC4P0CG21 123 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms