RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SLC35B3Q9H1N7 401 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 TAS2R8Q9NYW2 309 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 U3KQA8 63 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 V9GYQ6 96 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 NUP210Q8TEM1 1887 aaPredicted RBP-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 TANC1Q9C0D5 1861 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 CCDC171Q6TFL3 1326 aa-0.19□□□□□ -2.44
SCFD1-214ENST00000554819 UHRF1BP1LA0JNW5 1464 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 GVQW2A0A096LPI5 108 aaPredicted RBP-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 TRAV17A0A0B4J275 112 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 F2Z2F3 143 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 ZNF670-ZNF695F2Z2N8 137 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 DPM2O94777 84 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 COX6A2Q02221 97 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 OR2T2Q6IF00 324 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 NDUFA11Q86Y39 141 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 TMEM35BQ8NCS4 154 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 DNAJC15Q9Y5T4 150 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 SSC5DA1L4H1 1573 aa-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 MAP2P11137 1827 aaKnown RBP-0.2□□□□□ -2.44
SCFD1-214ENST00000554819 PBRM1Q86U86 1689 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 ADGRL2O95490 1459 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 PTPRMP28827 1452 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 ARAP1Q96P48 1450 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 AFDNP55196 1824 aaKnown RBP-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 A0A087WTM6 91 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 A0A1B0GW64 132 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 J3KT08 172 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 PIN1P1O15428 100 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 MT1HP80294 61 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 KRTAP6-2Q3LI66 62 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 FAM213BQ8TBF2 198 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 SMIM11BQ8TCY0 68 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 SKA2Q8WVK7 121 aaPredicted RBP-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 ADAMTS12P58397 1594 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 ASXL3Q9C0F0 2248 aa-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.21□□□□□ -2.44
SCFD1-214ENST00000554819 EHBP1L1Q8N3D4 1523 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 URB1O60287 2271 aaKnown RBP-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 MYH3P11055 1940 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 ATG2AQ2TAZ0 1938 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 TRAV36DV7A0A075B6V5 113 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 A0A1B0GX51 115 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 TFF1P04155 84 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 HLA-DRB4P13762 266 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 CCL3L1P16619 93 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 S100GP29377 79 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 S100A5P33763 92 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 OR8B8Q15620 311 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 OR8I2Q8N0Y5 310 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 ATP6V0E2Q8NHE4 81 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 DYNLRB2Q8TF09 96 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 HLA-DRB4X5D2U9 266 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 CUL7Q14999 1698 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 CHD1O14646 1710 aa-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 TNS1Q9HBL0 1735 aaKnown RBP-0.22□□□□□ -2.44
SCFD1-214ENST00000554819 FER1L6Q2WGJ9 1857 aa-0.22□□□□□ -2.45
SCFD1-214ENST00000554819 TRPM7Q96QT4 1865 aa-0.22□□□□□ -2.45
SCFD1-214ENST00000554819 KIAA0586Q9BVV6 1533 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 TCRBV3S1A0A5B6 114 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 RBAKDNA6NC62 111 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 TSTD3H0UI37 97 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 MT-ND4LP03901 98 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 NMBP08949 121 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 PAEPP09466 180 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 SCTP09683 121 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 SLC25A6P12236 298 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 SSBP1Q04837 148 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 TMEM244Q5VVB8 128 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 CYP2G1PQ6ZSU1 146 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 SNX29P2Q8IUI4 249 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 MAGOHBQ96A72 148 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 IFI27L1Q96BM0 104 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 ERG28Q9UKR5 140 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 GINS2Q9Y248 185 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 NOP16Q9Y3C1 178 aaKnown RBP-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 GOLGA3Q08378 1498 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 IQSEC2Q5JU85 1478 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 BCL9LQ86UU0 1499 aa-0.23□□□□□ -2.45
SCFD1-214ENST00000554819 ZNF142P52746 1687 aaPredicted RBP-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 FMN2Q9NZ56 1722 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 LYNX1G3V0Z9 82 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 CCDC179H3BU77 68 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 YPEL1O60688 119 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 SMIM24O75264 130 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 RBP4P02753 201 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 APODP05090 189 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 MT1BP07438 61 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 NBEAP1P0C6P0 100 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 COX4I1P13073 169 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 ATP11AUNQ6ZP68 121 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 SMIM15Q7Z3B0 74 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 Q96NJ1 140 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 BANF2Q9H503 90 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 TMEM242Q9NWH2 141 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 CALML5Q9NZT1 146 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 HSPB11Q9Y547 144 aa-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 SMG6Q86US8 1419 aaKnown RBP-0.24□□□□□ -2.45
SCFD1-214ENST00000554819 NESP48681 1621 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms