RNA–Protein interactions for RNA: ENST00000554567.1

KTN1-215, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-215ENST00000554567 BLOC1S1P78537 153 aa16.85■□□□□ 0.29
KTN1-215ENST00000554567 SUMO4Q6EEV6 95 aa16.85■□□□□ 0.29
KTN1-215ENST00000554567 BIN3Q9NQY0 253 aa16.84■□□□□ 0.29
KTN1-215ENST00000554567 A0A1B0GUV1 79 aa16.82■□□□□ 0.28
KTN1-215ENST00000554567 FER1L6-AS1Q8NA97 138 aa16.82■□□□□ 0.28
KTN1-215ENST00000554567 SPACA4Q8TDM5 124 aa16.82■□□□□ 0.28
KTN1-215ENST00000554567 RNF185Q96GF1 192 aa16.82■□□□□ 0.28
KTN1-215ENST00000554567 DPH3P1Q9H4G8 78 aa16.82■□□□□ 0.28
KTN1-215ENST00000554567 LYPD6BQ8NI32 183 aa16.81■□□□□ 0.28
KTN1-215ENST00000554567 NDUFS6O75380 124 aaKnown RBP16.8■□□□□ 0.28
KTN1-215ENST00000554567 OR2D3Q8NGH3 330 aa16.8■□□□□ 0.28
KTN1-215ENST00000554567 PHOX2AO14813 284 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 UBE2L6O14933 153 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 IGLC6P0CF74 106 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 GNG4P50150 75 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 CENPWQ5EE01 88 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 RASL11AQ6T310 242 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 LRP2P98164 4655 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 RNF213Q63HN8 5207 aa16.79■□□□□ 0.28
KTN1-215ENST00000554567 RPS20P60866 119 aaKnown RBP16.78■□□□□ 0.28
KTN1-215ENST00000554567 WDR73Q6P4I2 378 aa16.78■□□□□ 0.28
KTN1-215ENST00000554567 TNXBP22105 4242 aa16.77■□□□□ 0.28
KTN1-215ENST00000554567 CACNG7P62955 275 aa16.77■□□□□ 0.28
KTN1-215ENST00000554567 C7orf33Q8WU49 177 aa16.77■□□□□ 0.28
KTN1-215ENST00000554567 MED9Q9NWA0 146 aa16.77■□□□□ 0.28
KTN1-215ENST00000554567 IGKV3OR2-268A0A0C4DH90 116 aa16.76■□□□□ 0.27
KTN1-215ENST00000554567 COX6A2Q02221 97 aa16.76■□□□□ 0.27
KTN1-215ENST00000554567 NIT2Q9NQR4 276 aa16.76■□□□□ 0.27
KTN1-215ENST00000554567 PLAC8Q9NZF1 115 aa16.76■□□□□ 0.27
KTN1-215ENST00000554567 XKRY2A2RUG3 117 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 C19orf71A6NCJ1 209 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 GAGE12HA6NDE8 117 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 TMEM250H0YL14 139 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 AMTP48728 403 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 ALKAL2Q6UX46 152 aa16.75■□□□□ 0.27
KTN1-215ENST00000554567 C15orf56Q8N910 161 aa16.74■□□□□ 0.27
KTN1-215ENST00000554567 GTSF1Q8WW33 167 aa16.74■□□□□ 0.27
KTN1-215ENST00000554567 PGLYRP4Q96LB8 373 aa16.74■□□□□ 0.27
KTN1-215ENST00000554567 COTL1Q14019 142 aa16.73■□□□□ 0.27
KTN1-215ENST00000554567 MAJINQ3KP22 176 aa16.73■□□□□ 0.27
KTN1-215ENST00000554567 HIGD2BQ4VC39 106 aa16.73■□□□□ 0.27
KTN1-215ENST00000554567 CFAP161Q6P656 301 aa16.73■□□□□ 0.27
KTN1-215ENST00000554567 IGKV2-24A0A0C4DH68 120 aa16.72■□□□□ 0.27
KTN1-215ENST00000554567 TRGC1P0CF51 173 aa16.72■□□□□ 0.27
KTN1-215ENST00000554567 RPS10P46783 165 aaKnown RBP16.72■□□□□ 0.27
KTN1-215ENST00000554567 LYZL1Q6UWQ5 148 aa16.72■□□□□ 0.27
KTN1-215ENST00000554567 TRBV20OR9-2A0A075B6H5 130 aa16.71■□□□□ 0.27
KTN1-215ENST00000554567 RAB19A4D1S5 217 aa16.71■□□□□ 0.27
KTN1-215ENST00000554567 F2Z2F3 143 aa16.71■□□□□ 0.27
KTN1-215ENST00000554567 NTF3P20783 257 aa16.71■□□□□ 0.27
KTN1-215ENST00000554567 PRSS3P2Q8NHM4 247 aa16.71■□□□□ 0.27
KTN1-215ENST00000554567 A0A1B0GVG6 124 aa16.7■□□□□ 0.26
KTN1-215ENST00000554567 ODF1Q14990 250 aa16.68■□□□□ 0.26
KTN1-215ENST00000554567 STPG4Q8N801 248 aa16.67■□□□□ 0.26
KTN1-215ENST00000554567 AMMECR1LQ6DCA0 310 aa16.66■□□□□ 0.26
KTN1-215ENST00000554567 LINC01600Q96MT4 127 aa16.66■□□□□ 0.26
KTN1-215ENST00000554567 PRR3P79522 188 aaKnown RBP16.65■□□□□ 0.26
KTN1-215ENST00000554567 CHCHD10Q8WYQ3 142 aaPredicted RBP16.65■□□□□ 0.26
KTN1-215ENST00000554567 TRAV26-2A0A0B4J265 109 aa16.64■□□□□ 0.25
KTN1-215ENST00000554567 TWIST1Q15672 202 aa16.64■□□□□ 0.25
KTN1-215ENST00000554567 RNASEKQ6P5S7 137 aaKnown RBP16.64■□□□□ 0.25
KTN1-215ENST00000554567 GATD1Q8NB37 220 aa16.63■□□□□ 0.25
KTN1-215ENST00000554567 NUDT10Q8NFP7 164 aa16.62■□□□□ 0.25
KTN1-215ENST00000554567 OCC1Q8TAD7 63 aa16.62■□□□□ 0.25
KTN1-215ENST00000554567 NUDT11Q96G61 164 aa16.62■□□□□ 0.25
KTN1-215ENST00000554567 FAM210AQ96ND0 272 aa16.62■□□□□ 0.25
KTN1-215ENST00000554567 CNFNQ9BYD5 112 aa16.62■□□□□ 0.25
KTN1-215ENST00000554567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.61■□□□□ 0.25
KTN1-215ENST00000554567 IGKV2-29A2NJV5 120 aaPredicted RBP16.61■□□□□ 0.25
KTN1-215ENST00000554567 A0A096LNI7 61 aa16.6■□□□□ 0.25
KTN1-215ENST00000554567 FAM231DQ6ZW35 169 aa16.6■□□□□ 0.25
KTN1-215ENST00000554567 GVQW2A0A096LPI5 108 aaPredicted RBP16.59■□□□□ 0.25
KTN1-215ENST00000554567 CTRLP40313 264 aa16.59■□□□□ 0.25
KTN1-215ENST00000554567 RPL39LQ96EH5 51 aaKnown RBP16.59■□□□□ 0.25
KTN1-215ENST00000554567 EIF5A2Q9GZV4 153 aaKnown RBP16.59■□□□□ 0.25
KTN1-215ENST00000554567 RPP21Q9H633 154 aaKnown RBP16.59■□□□□ 0.25
KTN1-215ENST00000554567 K7EN84 100 aa16.58■□□□□ 0.24
KTN1-215ENST00000554567 FGF6P10767 208 aa16.57■□□□□ 0.24
KTN1-215ENST00000554567 CT83Q5H943 113 aa16.57■□□□□ 0.24
KTN1-215ENST00000554567 APCSP02743 223 aa16.56■□□□□ 0.24
KTN1-215ENST00000554567 FOXI1Q12951 378 aa16.56■□□□□ 0.24
KTN1-215ENST00000554567 SMDT1Q9H4I9 107 aa16.56■□□□□ 0.24
KTN1-215ENST00000554567 A0A0J9YXV3 536 aa16.55■□□□□ 0.24
KTN1-215ENST00000554567 XCL1P47992 114 aa16.55■□□□□ 0.24
KTN1-215ENST00000554567 LINC00526Q96FQ7 95 aa16.55■□□□□ 0.24
KTN1-215ENST00000554567 NCR2O95944 276 aa16.54■□□□□ 0.24
KTN1-215ENST00000554567 FOXA3P55318 350 aaPredicted RBP16.54■□□□□ 0.24
KTN1-215ENST00000554567 TEX261Q6UWH6 196 aa16.54■□□□□ 0.24
KTN1-215ENST00000554567 A8MWL6 223 aa16.53■□□□□ 0.24
KTN1-215ENST00000554567 H7C423 109 aa16.53■□□□□ 0.24
KTN1-215ENST00000554567 FAM74A3Q4VXF1 159 aa16.53■□□□□ 0.24
KTN1-215ENST00000554567 SPINK6Q6UWN8 80 aa16.53■□□□□ 0.24
KTN1-215ENST00000554567 RNASE7Q9H1E1 156 aaKnown RBP16.53■□□□□ 0.24
KTN1-215ENST00000554567 REG3GQ6UW15 175 aa16.52■□□□□ 0.24
KTN1-215ENST00000554567 SMIM15Q7Z3B0 74 aa16.52■□□□□ 0.24
KTN1-215ENST00000554567 SMIM7Q9BQ49 75 aa16.52■□□□□ 0.24
KTN1-215ENST00000554567 LINC00474Q9P2X8 69 aa16.52■□□□□ 0.24
KTN1-215ENST00000554567 FAM231BA6NCW3 169 aa16.51■□□□□ 0.23
KTN1-215ENST00000554567 SDHAF1A6NFY7 115 aa16.51■□□□□ 0.23
KTN1-215ENST00000554567 SRP19P09132 144 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms