RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 RPL39LQ96EH5 51 aaKnown RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 NKX6-2Q9C056 277 aaPredicted RBP3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 DPH3P1Q9H4G8 78 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 AP5S1Q9NUS5 200 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
AL390816.1-201ENST00000553990 UBE2L6O14933 153 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 GAS8-AS1O95177 125 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 RASL11AQ6T310 242 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 LYZL1Q6UWQ5 148 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 CLRN3Q8NCR9 226 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 C7orf33Q8WU49 177 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 CHCHD10Q8WYQ3 142 aaPredicted RBP3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 GNG13Q9P2W3 67 aa3.6□□□□□ -1.83
AL390816.1-201ENST00000553990 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 C19orf71A6NCJ1 209 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 NDUFS6O75380 124 aaKnown RBP3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 NTF3P20783 257 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 PKIAP61925 76 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 TMEM97Q5BJF2 176 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 WDR73Q6P4I2 378 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 RNASEKQ6P5S7 137 aaKnown RBP3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 GATD1Q8NB37 220 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 MBD3L1Q8WWY6 194 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 LINC01600Q96MT4 127 aa3.59□□□□□ -1.83
AL390816.1-201ENST00000553990 TRBV20OR9-2A0A075B6H5 130 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 TRAV8-4A0A0B4J246 113 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 A0A0J9YXV3 536 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 A0A1B0GUV1 79 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 P01737 135 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 S100A9P06702 114 aaKnown RBP3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 H2AFB1P0C5Y9 115 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 RPS10P46783 165 aaKnown RBP3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 XCL1P47992 114 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 FOXI1Q12951 378 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 COTL1Q14019 142 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 TCEAL7Q9BRU2 100 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 RNASE7Q9H1E1 156 aaKnown RBP3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 NIT2Q9NQR4 276 aa3.58□□□□□ -1.84
AL390816.1-201ENST00000553990 GVQW2A0A096LPI5 108 aaPredicted RBP3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 H7C1H1 209 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 CCL25O15444 150 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 BCL2L11O43521 198 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 TWIST1Q15672 202 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 RNASE13Q5GAN3 156 aaKnown RBP3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 AMMECR1LQ6DCA0 310 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 NUDT10Q8NFP7 164 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 C11orf52Q96A22 123 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 NUDT11Q96G61 164 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 RNF185Q96GF1 192 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 PGLYRP4Q96LB8 373 aa3.57□□□□□ -1.84
AL390816.1-201ENST00000553990 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 KANTRA0A1W2PQU2 76 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 K7EN84 100 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 IFNA1P01562 189 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 APCSP02743 223 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 TRGC1P0CF51 173 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 BCL2P10415 239 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 FGF6P10767 208 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 GNG4P50150 75 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 RPS20P60866 119 aaKnown RBP3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 CACNG7P62955 275 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 GAGE2BQ13066 116 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 CARD19Q96LW7 228 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 MED9Q9NWA0 146 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 TMEM242Q9NWH2 141 aa3.56□□□□□ -1.84
AL390816.1-201ENST00000553990 FAM231BA6NCW3 169 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 SDHAF1A6NFY7 115 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 SMKR1H3BMG3 65 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 CTRLP40313 264 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 SRSF9Q13242 221 aaKnown RBP eCLIP3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 ZNF345Q14585 488 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 XP32Q5T750 250 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 CFAP161Q6P656 301 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 PHF5AQ7RTV0 110 aaKnown RBP3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 MANBALQ9NQG1 85 aa3.55□□□□□ -1.84
AL390816.1-201ENST00000553990 IGLV4-69A0A075B6H9 119 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 LINC00959A0A1B0GUT2 108 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 UMAD1C9J7I0 102 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 NCR2O95944 276 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 TSHBP01222 138 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 MEF2BQ02080 365 aaPredicted RBP3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 REG3GQ6UW15 175 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 SPINK6Q6UWN8 80 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 KRTAP11-1Q8IUC1 163 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 PRR26Q8N8Z3 221 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 OR5A1Q8NGJ0 315 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 OPRPNQ99935 248 aaPredicted RBP3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 RPP21Q9H633 154 aaKnown RBP3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 BATF3Q9NR55 127 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 PSORS1C2Q9UIG4 136 aa3.54□□□□□ -1.84
AL390816.1-201ENST00000553990 IGHV1-58A0A0C4DH39 117 aa3.53□□□□□ -1.84
AL390816.1-201ENST00000553990 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
AL390816.1-201ENST00000553990 F2Z2F3 143 aa3.53□□□□□ -1.84
AL390816.1-201ENST00000553990 PMCHP20382 165 aa3.53□□□□□ -1.84
AL390816.1-201ENST00000553990 CAMPP49913 170 aa3.53□□□□□ -1.84
AL390816.1-201ENST00000553990 CEBPGP53567 150 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms