RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LINC01546A6NGU7 62 aa10.08□□□□□ -0.8
SHMT2-210ENST00000553950 S100A6P06703 90 aa10.08□□□□□ -0.8
SHMT2-210ENST00000553950 LINC00614P0C842 121 aa10.08□□□□□ -0.8
SHMT2-210ENST00000553950 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-210ENST00000553950 AMTP48728 403 aa10.08□□□□□ -0.8
SHMT2-210ENST00000553950 IQCJQ1A5X6 159 aa10.08□□□□□ -0.8
SHMT2-210ENST00000553950 TRBV6-8A0A0A6YYG3 113 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 HSBP1O75506 76 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 TSHBP01222 138 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 LAGE3Q14657 143 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
SHMT2-210ENST00000553950 Q9UF83 564 aa10.07□□□□□ -0.8
SHMT2-210ENST00000553950 IGHV3-38A0A0C4DH36 116 aa10.06□□□□□ -0.8
SHMT2-210ENST00000553950 H7C423 109 aa10.06□□□□□ -0.8
SHMT2-210ENST00000553950 CCL18P55774 89 aa10.06□□□□□ -0.8
SHMT2-210ENST00000553950 LELP1Q5T871 98 aa10.06□□□□□ -0.8
SHMT2-210ENST00000553950 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
SHMT2-210ENST00000553950 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
SHMT2-210ENST00000553950 UBE2L6O14933 153 aa10.05□□□□□ -0.8
SHMT2-210ENST00000553950 SERF1AO75920 110 aa10.05□□□□□ -0.8
SHMT2-210ENST00000553950 NIT1Q86X76 327 aa10.05□□□□□ -0.8
SHMT2-210ENST00000553950 CYSLTR1Q9Y271 337 aa10.04□□□□□ -0.8
SHMT2-210ENST00000553950 HBDP02042 147 aa10.03□□□□□ -0.8
SHMT2-210ENST00000553950 ESDP10768 282 aa10.03□□□□□ -0.8
SHMT2-210ENST00000553950 NDUFA6P56556 154 aa10.03□□□□□ -0.8
SHMT2-210ENST00000553950 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
SHMT2-210ENST00000553950 APLNQ9ULZ1 77 aa10.03□□□□□ -0.8
SHMT2-210ENST00000553950 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
SHMT2-210ENST00000553950 BTF3P20290 206 aaKnown RBP10.02□□□□□ -0.81
SHMT2-210ENST00000553950 ZFAND6Q6FIF0 208 aa10.02□□□□□ -0.81
SHMT2-210ENST00000553950 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
SHMT2-210ENST00000553950 CHCHD5Q9BSY4 110 aa10.02□□□□□ -0.81
SHMT2-210ENST00000553950 CHCHD7Q9BUK0 85 aa10.02□□□□□ -0.81
SHMT2-210ENST00000553950 MRPS16Q9Y3D3 137 aaKnown RBP10.02□□□□□ -0.81
SHMT2-210ENST00000553950 DNAH7Q8WXX0 4024 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 NPSP0C0P6 89 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 NTM-AS1Q6ZSK4 140 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 UBE2DNLQ8IWF7 75 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 URB1-AS1Q96HZ7 61 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 PACRGQ96M98 296 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-210ENST00000553950 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
SHMT2-210ENST00000553950 AMMECR1LQ6DCA0 310 aa10□□□□□ -0.81
SHMT2-210ENST00000553950 C2orf66Q6UXQ4 117 aa10□□□□□ -0.81
SHMT2-210ENST00000553950 UPK3BQ9BT76 320 aa10□□□□□ -0.81
SHMT2-210ENST00000553950 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
SHMT2-210ENST00000553950 ESRGQ1W209 222 aa9.99□□□□□ -0.81
SHMT2-210ENST00000553950 PAPPA-AS1Q5QFB9 102 aa9.99□□□□□ -0.81
SHMT2-210ENST00000553950 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
SHMT2-210ENST00000553950 TOMM6Q96B49 74 aa9.99□□□□□ -0.81
SHMT2-210ENST00000553950 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
SHMT2-210ENST00000553950 TMA7Q9Y2S6 64 aaKnown RBP9.99□□□□□ -0.81
SHMT2-210ENST00000553950 A0A087WX48 190 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 ATP5LO75964 103 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 S100A2P29034 98 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 LINC00310P59036 64 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 TIMM17AQ99595 171 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
SHMT2-210ENST00000553950 CSDC2Q9Y534 153 aaKnown RBP9.98□□□□□ -0.81
SHMT2-210ENST00000553950 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-210ENST00000553950 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-210ENST00000553950 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
SHMT2-210ENST00000553950 DGAT2L7PQ6IED9 249 aa9.97□□□□□ -0.81
SHMT2-210ENST00000553950 Q6ZN92 141 aa9.97□□□□□ -0.81
SHMT2-210ENST00000553950 TGP01266 2768 aa9.97□□□□□ -0.81
SHMT2-210ENST00000553950 K7EP13 123 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 LEPROTL1O95214 131 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 FGF6P10767 208 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 ERASQ7Z444 233 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 OR5A1Q8NGJ0 315 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 TMEM141Q96I45 108 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 LINC00588Q9Y4M8 146 aa9.96□□□□□ -0.82
SHMT2-210ENST00000553950 A0A096LNJ9 63 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 TMEM262E9PQX1 116 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-210ENST00000553950 GAGE6Q13070 117 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 LINC01556Q5JQF7 62 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 DEFB104AQ8WTQ1 72 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 SCGB3A1Q96QR1 104 aa9.95□□□□□ -0.82
SHMT2-210ENST00000553950 DYNC2H1Q8NCM8 4307 aaKnown RBP9.94□□□□□ -0.82
SHMT2-210ENST00000553950 C5orf52A6NGY3 159 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 SIVA1O15304 175 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 RPL39P62891 51 aaKnown RBP9.94□□□□□ -0.82
SHMT2-210ENST00000553950 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
SHMT2-210ENST00000553950 PMCHL1Q16048 86 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 HIST3H2BBQ8N257 126 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
SHMT2-210ENST00000553950 DNAH10OSP0CZ25 163 aa9.93□□□□□ -0.82
SHMT2-210ENST00000553950 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
SHMT2-210ENST00000553950 MPV17L2Q567V2 206 aa9.93□□□□□ -0.82
SHMT2-210ENST00000553950 LGALS9CQ6DKI2 356 aa9.93□□□□□ -0.82
SHMT2-210ENST00000553950 WFDC10BQ8IUB3 73 aa9.93□□□□□ -0.82
SHMT2-210ENST00000553950 TRAV9-2A0A087WT02 112 aa9.92□□□□□ -0.82
SHMT2-210ENST00000553950 NUPR1O60356 82 aa9.92□□□□□ -0.82
SHMT2-210ENST00000553950 RBX1P62877 108 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms