RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 RAX2Q96IS3 184 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 UBE2E2Q96LR5 201 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 MYO9AB2RTY4 2548 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 A8MZ25 164 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 H3BMM0 161 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 H7C2G1 150 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 J3QR89 54 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 PRB1P04280 392 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 Q6YL49 198 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 MUSTN1Q8IVN3 82 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 TMEM263Q8WUH6 116 aaKnown RBP5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 CDIP1Q9H305 208 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 VCX2Q9H322 139 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 PRO1854Q9UHT4 67 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 PRRC2AP48634 2157 aaKnown RBP5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 ZNF462Q96JM2 2506 aa5.05□□□□□ -1.6
LINC-ROR-201ENST00000553704 PTPN13Q12923 2485 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGHV3-38A0A0C4DH36 116 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 A0A0J9YXY3 114 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGKV2-29A2NJV5 120 aaPredicted RBP5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 A8MTW9 85 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGHV3-33P01772 117 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGHV3-30-3P0DP02 117 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 IGHV4-31P0DP07 118 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 DSCR9P59020 149 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 KRTAP10-9P60411 292 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 ATP6V0E2Q8NHE4 81 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 LITAFQ99732 161 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 USP24Q9UPU5 2620 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 UBR5O95071 2799 aaPredicted RBP5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 CHD6Q8TD26 2715 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 M0R2P5 195 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 Q6ZUT4 128 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 CHCHD7Q9BUK0 85 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 EDA2RQ9HAV5 297 aa5.04□□□□□ -1.6
LINC-ROR-201ENST00000553704 J3QLI3 93 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 SBSPONQ8IVN8 264 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 ANKRD29Q8N6D5 301 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 LINC00467Q9BRT7 94 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 TIMM21Q9BVV7 248 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 MAP6D1Q9H9H5 199 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 EPG5Q9HCE0 2579 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 MRPS36P82909 103 aaKnown RBP5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 ADAMTSL4-AS1Q5T5F5 129 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 Q6ZSV7 163 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 TEN1Q86WV5 123 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 C11orf72Q8NBR9 251 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 UBE2D4Q9Y2X8 147 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 PYGO1Q9Y3Y4 419 aa5.03□□□□□ -1.6
LINC-ROR-201ENST00000553704 NIPBLQ6KC79 2804 aaeCLIP5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 TLN2Q9Y4G6 2542 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 SPINK8P0C7L1 97 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 SCGB1C2P0DMR2 95 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 NPC2P61916 151 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 KHDC1LQ5JSQ8 128 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 TNFRSF18Q9Y5U5 241 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 A0A0B4J2C4 111 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 MT-ATP8P03928 68 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 SCGB1A1P11684 91 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 XGP55808 180 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 ZNF415Q09FC8 603 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 C1orf43Q9BWL3 253 aa5.02□□□□□ -1.61
LINC-ROR-201ENST00000553704 TRBV20-1A0A075B6N2 111 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 A8MWV9 139 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 C9JAW5 83 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 PPDPFLQ8WWR9 84 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 NAV2Q8IVL1 2488 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 NF1P21359 2839 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 IGHV1-58A0A0C4DH39 117 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 CITED1Q99966 193 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 ERG28Q9UKR5 140 aa5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 SETXQ7Z333 2677 aaKnown RBP5.01□□□□□ -1.61
LINC-ROR-201ENST00000553704 TRIAP1O43715 76 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 SLC25A20O43772 301 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 Q1RN00 199 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 VSIG2Q96IQ7 327 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 LINC01587Q99440 93 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 NDUFA12Q9UI09 145 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 WNK1Q9H4A3 2382 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 ITPR3Q14573 2671 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 IGHV3-53P01767 116 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 ODF3L2Q3SX64 289 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 Q8N2B8 174 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 DAND5Q8N907 189 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 DYNLRB2Q8TF09 96 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 C4orf3Q8WVX3 66 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 BBC3Q96PG8 261 aaPredicted RBP5□□□□□ -1.61
LINC-ROR-201ENST00000553704 SONP18583 2426 aaKnown RBP5□□□□□ -1.61
LINC-ROR-201ENST00000553704 APCP25054 2843 aa5□□□□□ -1.61
LINC-ROR-201ENST00000553704 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 DEFB114Q30KQ6 69 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 SPANXA1Q9NS26 97 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 XCL2Q9UBD3 114 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 CDKN2A-AS1Q9UH64 79 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 IGHV3OR16-12A0A075B7B8 117 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 NDUFA7O95182 113 aa4.99□□□□□ -1.61
LINC-ROR-201ENST00000553704 INSP01308 110 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms