RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 CTRLP40313 264 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 URB1-AS1Q96HZ7 61 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 NDUFA12Q9UI09 145 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 LOC100131303A0A0U1RQF7 123 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 MYMXA0A1B0GTQ4 84 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 SH2D6Q7Z4S9 175 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 C9JAW5 83 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 J3QQQ9 107 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 FSTL3O95633 263 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 DNAL4O96015 105 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 MRPS16Q9Y3D3 137 aaKnown RBP8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 GYPEP15421 78 aa8.04□□□□□ -1.12
TGFBR1-209ENST00000552516 A8MWV9 139 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 IGLC6P0CF74 106 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 LINC01006Q8NI28 216 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 BAALCQ8WXS3 180 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 RNF185Q96GF1 192 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 IGHV3-30P01768 117 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 IGHV3-33P01772 117 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 IGHV3-30-3P0DP02 117 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 IGHV3-30-5P0DP03 117 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 SEC11AP67812 179 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 H3BUA1 57 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 CRPP02741 224 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 NDUFA7O95182 113 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 ODF1Q14990 250 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
TGFBR1-209ENST00000552516 Q8N976 141 aa8.02□□□□□ -1.12
TGFBR1-209ENST00000552516 K7EQG2 157 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 LINC00526Q96FQ7 95 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 DEFB114Q30KQ6 69 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 SPENQ96T58 3664 aaKnown RBP8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 H3BMM0 161 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 MRPS12O15235 138 aaKnown RBP8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 RNASE3P12724 160 aaKnown RBP8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 IGHV4-4A0A075B6R2 117 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 C1QTNF4Q9BXJ3 329 aa8.02□□□□□ -1.13
TGFBR1-209ENST00000552516 MAPKAPK5-AS1Q8N8E1 139 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 SCRT2Q9NQ03 307 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 Q9H8V8 135 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 UNC79Q9P2D8 2635 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 TMEM243Q9BU79 118 aa8.01□□□□□ -1.13
TGFBR1-209ENST00000552516 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
TGFBR1-209ENST00000552516 Q6ZUT4 128 aa8□□□□□ -1.13
TGFBR1-209ENST00000552516 PLEKHB2Q96CS7 222 aa8□□□□□ -1.13
TGFBR1-209ENST00000552516 COL27A1Q8IZC6 1860 aaPredicted RBP8□□□□□ -1.13
TGFBR1-209ENST00000552516 UBE2WQ96B02 151 aa8□□□□□ -1.13
TGFBR1-209ENST00000552516 FGF6P10767 208 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 Q9UF83 564 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 DCANP1Q8TF63 244 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 C4orf3Q8WVX3 66 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 PTH2Q96A98 100 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 CST9LQ9H4G1 147 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 TMEM238C9JI98 176 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 CEND1Q8N111 149 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 C20orf78Q9BR46 151 aa7.99□□□□□ -1.13
TGFBR1-209ENST00000552516 C12orf74Q32Q52 190 aa7.98□□□□□ -1.13
TGFBR1-209ENST00000552516 ZNF493Q6ZR52 646 aa7.98□□□□□ -1.13
TGFBR1-209ENST00000552516 K7EMT4 169 aa7.98□□□□□ -1.13
TGFBR1-209ENST00000552516 ZNF580Q9UK33 172 aa7.98□□□□□ -1.13
TGFBR1-209ENST00000552516 BAHCC1Q9P281 2608 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 LINC00467Q9BRT7 94 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 RHODO00212 210 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 S100A7L2Q5SY68 101 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 RNASE8Q8TDE3 154 aaKnown RBP7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 A4D1N5 150 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 IGLV1-40P01703 118 aa7.97□□□□□ -1.13
TGFBR1-209ENST00000552516 CRIP2P52943 208 aaPredicted RBP7.96□□□□□ -1.13
TGFBR1-209ENST00000552516 MUSTN1Q8IVN3 82 aa7.96□□□□□ -1.13
TGFBR1-209ENST00000552516 LENEPQ9Y5L5 61 aa7.96□□□□□ -1.13
TGFBR1-209ENST00000552516 C9orf118A6NHY6 69 aa7.96□□□□□ -1.13
TGFBR1-209ENST00000552516 SNCGO76070 127 aa7.96□□□□□ -1.13
TGFBR1-209ENST00000552516 TAX1BP3O14907 124 aa7.96□□□□□ -1.14
TGFBR1-209ENST00000552516 WFDC2Q14508 124 aa7.96□□□□□ -1.14
TGFBR1-209ENST00000552516 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.14
TGFBR1-209ENST00000552516 A0A1W2PPM0 123 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 HHLA3Q9XRX5 114 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 OCIAD2Q56VL3 154 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 VSIG2Q96IQ7 327 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 FAM222AQ5U5X8 452 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 UBE2DNLQ8IWF7 75 aa7.95□□□□□ -1.14
TGFBR1-209ENST00000552516 TSPAN13O95857 204 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 C2orf82Q6UX34 121 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 EDA2RQ9HAV5 297 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 TRAV26-1A0A087WT03 109 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 MORN3Q6PF18 240 aaPredicted RBP7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 KLK12Q9UKR0 248 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 TRBV7-3A0A075B6L6 115 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 K7EQD1 137 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 SLC25A29Q8N8R3 303 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 NRACQ8N912 160 aa7.94□□□□□ -1.14
TGFBR1-209ENST00000552516 SS18Q15532 418 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 RETNQ9HD89 108 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 CDKN2A-AS1Q9UH64 79 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 IGKV2D-24A0A075B6R9 120 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 ODF3L2Q3SX64 289 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
TGFBR1-209ENST00000552516 NIPBLQ6KC79 2804 aaeCLIP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms