RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 EIF5A2Q9GZV4 153 aaKnown RBP10.1□□□□□ -0.79
BRF1-220ENST00000552127 NIT2Q9NQR4 276 aa10.1□□□□□ -0.79
BRF1-220ENST00000552127 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
BRF1-220ENST00000552127 PGLYRP4Q96LB8 373 aa10.09□□□□□ -0.79
BRF1-220ENST00000552127 FAM210AQ96ND0 272 aa10.09□□□□□ -0.79
BRF1-220ENST00000552127 SMIM7Q9BQ49 75 aa10.09□□□□□ -0.79
BRF1-220ENST00000552127 KRTAP10-4P60372 401 aaPredicted RBP10.08□□□□□ -0.8
BRF1-220ENST00000552127 CT83Q5H943 113 aa10.08□□□□□ -0.8
BRF1-220ENST00000552127 CLPSL2Q6UWE3 100 aa10.08□□□□□ -0.8
BRF1-220ENST00000552127 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
BRF1-220ENST00000552127 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
BRF1-220ENST00000552127 A8MWL6 223 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 HLA-DQA1P01909 254 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 Q6ZSA8 131 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 SMIM15Q7Z3B0 74 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
BRF1-220ENST00000552127 TRAV26-2A0A0B4J265 109 aa10.06□□□□□ -0.8
BRF1-220ENST00000552127 SRP19P09132 144 aaKnown RBP10.06□□□□□ -0.8
BRF1-220ENST00000552127 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
BRF1-220ENST00000552127 GATD1Q8NB37 220 aa10.06□□□□□ -0.8
BRF1-220ENST00000552127 ZNF727A8MUV8 499 aa10.05□□□□□ -0.8
BRF1-220ENST00000552127 COTL1Q14019 142 aa10.05□□□□□ -0.8
BRF1-220ENST00000552127 LINC01620Q4KN68 170 aa10.05□□□□□ -0.8
BRF1-220ENST00000552127 USP17L23D6RBM5 183 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 AMTP48728 403 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 FOXA3P55318 350 aaPredicted RBP10.04□□□□□ -0.8
BRF1-220ENST00000552127 REG3AQ06141 175 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 C20orf203Q8NBC4 194 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 BORCS7Q96B45 105 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
BRF1-220ENST00000552127 KRTAP9-2Q9BYQ4 174 aa10.04□□□□□ -0.8
BRF1-220ENST00000552127 TNXBP22105 4242 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 A0A1B0GUV1 79 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 UBE2L6O14933 153 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 KRTAP26-1Q6PEX3 210 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 TEX261Q6UWH6 196 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 GFRA4Q9GZZ7 299 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 OSTCQ9NRP0 149 aa10.03□□□□□ -0.8
BRF1-220ENST00000552127 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
BRF1-220ENST00000552127 TSKUQ8WUA8 353 aa10.02□□□□□ -0.81
BRF1-220ENST00000552127 HIGD1CA8MV81 97 aa10.01□□□□□ -0.81
BRF1-220ENST00000552127 IGLV10-54A0A075B6I4 117 aa10□□□□□ -0.81
BRF1-220ENST00000552127 TRAV8-4A0A0B4J246 113 aa10□□□□□ -0.81
BRF1-220ENST00000552127 A0A1B0GUT8 65 aa10□□□□□ -0.81
BRF1-220ENST00000552127 FAM231BA6NCW3 169 aa10□□□□□ -0.81
BRF1-220ENST00000552127 NCR2O95944 276 aa10□□□□□ -0.81
BRF1-220ENST00000552127 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
BRF1-220ENST00000552127 SDHAF1A6NFY7 115 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 APCSP02743 223 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 PRSS1P07477 247 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 SCXQ7RTU7 201 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 ISOC2Q96AB3 205 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 V9GYV3 84 aa9.99□□□□□ -0.81
BRF1-220ENST00000552127 TRBV6-5A0A0K0K1A5 114 aa9.98□□□□□ -0.81
BRF1-220ENST00000552127 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
BRF1-220ENST00000552127 TMEM241Q24JQ0 296 aa9.98□□□□□ -0.81
BRF1-220ENST00000552127 TMEM191AQ9H0A3 160 aa9.98□□□□□ -0.81
BRF1-220ENST00000552127 RPL23P62829 140 aaKnown RBP9.97□□□□□ -0.81
BRF1-220ENST00000552127 CHAC1Q9BUX1 264 aa9.97□□□□□ -0.81
BRF1-220ENST00000552127 C9JQL5 133 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 H7C423 109 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 I3L3M4 83 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 GAS8-AS1O95177 125 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 ADIRFQ15847 76 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 AMMECR1LQ6DCA0 310 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 NUP35Q8NFH5 326 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 RNF185Q96GF1 192 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 ST20Q9HBF5 79 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 NAT8Q9UHE5 227 aa9.96□□□□□ -0.82
BRF1-220ENST00000552127 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.95□□□□□ -0.82
BRF1-220ENST00000552127 IGKV2-29A2NJV5 120 aaPredicted RBP9.95□□□□□ -0.82
BRF1-220ENST00000552127 PMCHP20382 165 aa9.95□□□□□ -0.82
BRF1-220ENST00000552127 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
BRF1-220ENST00000552127 RIGQ13278 110 aa9.95□□□□□ -0.82
BRF1-220ENST00000552127 PEA15Q15121 130 aa9.95□□□□□ -0.82
BRF1-220ENST00000552127 CLRN3Q8NCR9 226 aa9.95□□□□□ -0.82
BRF1-220ENST00000552127 MRAP2Q96G30 205 aa9.95□□□□□ -0.82
BRF1-220ENST00000552127 KRTAP9-6A0A140TA67 174 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 FGF6P10767 208 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 RAB4AP20338 218 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 RPS10P46783 165 aaKnown RBP9.94□□□□□ -0.82
BRF1-220ENST00000552127 RNASEKQ6P5S7 137 aaKnown RBP9.94□□□□□ -0.82
BRF1-220ENST00000552127 AMN1Q8IY45 258 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 SMDT1Q9H4I9 107 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 NAT8BQ9UHF3 227 aa9.94□□□□□ -0.82
BRF1-220ENST00000552127 IGKV3OR2-268A0A0C4DH90 116 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 hDV102S1A0JD36 115 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 TSHBP01222 138 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 ZNF25P17030 456 aaPredicted RBP9.93□□□□□ -0.82
BRF1-220ENST00000552127 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 CIRBP-AS1Q8TBR5 109 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 TMEM242Q9NWH2 141 aa9.93□□□□□ -0.82
BRF1-220ENST00000552127 CNBPP62633 177 aaKnown RBP9.92□□□□□ -0.82
BRF1-220ENST00000552127 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
BRF1-220ENST00000552127 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
BRF1-220ENST00000552127 GAGE12HA6NDE8 117 aa9.91□□□□□ -0.82
BRF1-220ENST00000552127 ESDP10768 282 aa9.91□□□□□ -0.82
BRF1-220ENST00000552127 HNRNPA3P51991 378 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms