RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 Q6ZR54 194 aa14.61□□□□□ -0.07
NEK3-202ENST00000550841 C10orf126Q8N4M7 172 aa14.61□□□□□ -0.07
NEK3-202ENST00000550841 CHCHD5Q9BSY4 110 aa14.61□□□□□ -0.07
NEK3-202ENST00000550841 TMEM262E9PQX1 116 aa14.6□□□□□ -0.07
NEK3-202ENST00000550841 KIR2DL4Q99706 377 aa14.6□□□□□ -0.07
NEK3-202ENST00000550841 TMEM243Q9BU79 118 aa14.6□□□□□ -0.07
NEK3-202ENST00000550841 CHCHD7Q9BUK0 85 aa14.6□□□□□ -0.07
NEK3-202ENST00000550841 A0A087WX48 190 aa14.59□□□□□ -0.07
NEK3-202ENST00000550841 TCAPO15273 167 aa14.59□□□□□ -0.07
NEK3-202ENST00000550841 BTF3P20290 206 aaKnown RBP14.59□□□□□ -0.07
NEK3-202ENST00000550841 AMTP48728 403 aa14.59□□□□□ -0.07
NEK3-202ENST00000550841 NIT1Q86X76 327 aa14.59□□□□□ -0.07
NEK3-202ENST00000550841 NPYP01303 97 aa14.58□□□□□ -0.08
NEK3-202ENST00000550841 FABP9Q0Z7S8 132 aa14.57□□□□□ -0.08
NEK3-202ENST00000550841 CBLN2Q8IUK8 224 aa14.57□□□□□ -0.08
NEK3-202ENST00000550841 YPEL4Q96NS1 127 aa14.57□□□□□ -0.08
NEK3-202ENST00000550841 MRPL18Q9H0U6 180 aaKnown RBP14.57□□□□□ -0.08
NEK3-202ENST00000550841 TRAPPC1Q9Y5R8 145 aa14.57□□□□□ -0.08
NEK3-202ENST00000550841 PRSS47A8MTI9 375 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 UBE2L6O14933 153 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 IGHV3-30P01768 117 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 IGHV3-33P01772 117 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 IGHV3-30-3P0DP02 117 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 IGHV3-30-5P0DP03 117 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 FCER1GP30273 86 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 MAP1LC3AQ9H492 121 aa14.56□□□□□ -0.08
NEK3-202ENST00000550841 H7C423 109 aa14.55□□□□□ -0.08
NEK3-202ENST00000550841 KIAA1644Q3SXP7 199 aa14.55□□□□□ -0.08
NEK3-202ENST00000550841 DEFB104AQ8WTQ1 72 aa14.55□□□□□ -0.08
NEK3-202ENST00000550841 SMIM2Q9BVW6 85 aa14.55□□□□□ -0.08
NEK3-202ENST00000550841 TSHBP01222 138 aa14.54□□□□□ -0.08
NEK3-202ENST00000550841 S100A1P23297 94 aa14.54□□□□□ -0.08
NEK3-202ENST00000550841 C1orf134Q5TEV5 83 aa14.54□□□□□ -0.08
NEK3-202ENST00000550841 GAGE6Q13070 117 aa14.53□□□□□ -0.08
NEK3-202ENST00000550841 DNAH6Q9C0G6 4158 aa14.53□□□□□ -0.08
NEK3-202ENST00000550841 IBA57-AS1B1ANH7 110 aa14.52□□□□□ -0.09
NEK3-202ENST00000550841 RAB5AP20339 215 aa14.52□□□□□ -0.09
NEK3-202ENST00000550841 KMT2AQ03164 3969 aa14.51□□□□□ -0.09
NEK3-202ENST00000550841 ESDP10768 282 aa14.51□□□□□ -0.09
NEK3-202ENST00000550841 NFE4Q86UQ8 179 aa14.51□□□□□ -0.09
NEK3-202ENST00000550841 C6orf223Q8N319 242 aa14.51□□□□□ -0.09
NEK3-202ENST00000550841 KRTAP1-5Q9BYS1 174 aa14.51□□□□□ -0.09
NEK3-202ENST00000550841 LOC389332A0A1B0GUA5 103 aa14.5□□□□□ -0.09
NEK3-202ENST00000550841 A0A1B0GUV1 79 aa14.5□□□□□ -0.09
NEK3-202ENST00000550841 SMAGPQ0VAQ4 97 aa14.5□□□□□ -0.09
NEK3-202ENST00000550841 LAGE3Q14657 143 aa14.5□□□□□ -0.09
NEK3-202ENST00000550841 TMEM18Q96B42 140 aa14.5□□□□□ -0.09
NEK3-202ENST00000550841 ALKBH7Q9BT30 221 aaPredicted RBP14.5□□□□□ -0.09
NEK3-202ENST00000550841 NXT2Q9NPJ8 142 aaKnown RBP14.5□□□□□ -0.09
NEK3-202ENST00000550841 RBX1P62877 108 aa14.49□□□□□ -0.09
NEK3-202ENST00000550841 MPV17L2Q567V2 206 aa14.49□□□□□ -0.09
NEK3-202ENST00000550841 AMMECR1LQ6DCA0 310 aa14.49□□□□□ -0.09
NEK3-202ENST00000550841 Q8N8P6 123 aa14.49□□□□□ -0.09
NEK3-202ENST00000550841 TRAV8-3A0A0A6YYJ7 113 aa14.48□□□□□ -0.09
NEK3-202ENST00000550841 K7EMI3 77 aa14.48□□□□□ -0.09
NEK3-202ENST00000550841 KLK12Q9UKR0 248 aa14.48□□□□□ -0.09
NEK3-202ENST00000550841 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.47□□□□□ -0.09
NEK3-202ENST00000550841 IGKV2-29A2NJV5 120 aaPredicted RBP14.47□□□□□ -0.09
NEK3-202ENST00000550841 ANGP03950 147 aaKnown RBP14.47□□□□□ -0.09
NEK3-202ENST00000550841 Q8N3U1 123 aa14.47□□□□□ -0.09
NEK3-202ENST00000550841 ZNF25P17030 456 aaPredicted RBP14.46□□□□□ -0.09
NEK3-202ENST00000550841 Q0VG73 95 aa14.46□□□□□ -0.09
NEK3-202ENST00000550841 Q8N976 141 aa14.46□□□□□ -0.09
NEK3-202ENST00000550841 PRSS3P2Q8NHM4 247 aa14.46□□□□□ -0.09
NEK3-202ENST00000550841 TMEM101Q96IK0 257 aa14.46□□□□□ -0.09
NEK3-202ENST00000550841 ATP6V1G1O75348 118 aa14.45□□□□□ -0.1
NEK3-202ENST00000550841 FGF6P10767 208 aa14.45□□□□□ -0.1
NEK3-202ENST00000550841 RNASEKQ6P5S7 137 aaKnown RBP14.45□□□□□ -0.1
NEK3-202ENST00000550841 COLCA2A8K830 154 aa14.44□□□□□ -0.1
NEK3-202ENST00000550841 G0S2P27469 103 aa14.44□□□□□ -0.1
NEK3-202ENST00000550841 ORMDL2Q53FV1 153 aa14.44□□□□□ -0.1
NEK3-202ENST00000550841 C20orf203Q8NBC4 194 aa14.44□□□□□ -0.1
NEK3-202ENST00000550841 CRPP02741 224 aa14.43□□□□□ -0.1
NEK3-202ENST00000550841 IFI27P40305 119 aaPredicted RBP14.43□□□□□ -0.1
NEK3-202ENST00000550841 LINC00336Q6ZUF6 198 aa14.43□□□□□ -0.1
NEK3-202ENST00000550841 MRPL52Q86TS9 123 aaKnown RBP14.43□□□□□ -0.1
NEK3-202ENST00000550841 UBE2WQ96B02 151 aa14.43□□□□□ -0.1
NEK3-202ENST00000550841 RMI2Q96E14 147 aa14.43□□□□□ -0.1
NEK3-202ENST00000550841 TM2D2Q9BX73 214 aa14.43□□□□□ -0.1
NEK3-202ENST00000550841 SCO1O75880 301 aa14.42□□□□□ -0.1
NEK3-202ENST00000550841 DGAT2L7PQ6IED9 249 aa14.42□□□□□ -0.1
NEK3-202ENST00000550841 Q9HAA7 133 aa14.42□□□□□ -0.1
NEK3-202ENST00000550841 COX11Q9Y6N1 276 aa14.42□□□□□ -0.1
NEK3-202ENST00000550841 IGLV4-60A0A075B6I1 120 aa14.41□□□□□ -0.1
NEK3-202ENST00000550841 LINC00269Q8N2A0 174 aa14.41□□□□□ -0.1
NEK3-202ENST00000550841 OR5A1Q8NGJ0 315 aa14.41□□□□□ -0.1
NEK3-202ENST00000550841 TIMM21Q9BVV7 248 aa14.41□□□□□ -0.1
NEK3-202ENST00000550841 CSDC2Q9Y534 153 aaKnown RBP14.41□□□□□ -0.1
NEK3-202ENST00000550841 RTL8CO15255 209 aa14.4□□□□□ -0.1
NEK3-202ENST00000550841 PRR34Q9NV39 138 aa14.4□□□□□ -0.1
NEK3-202ENST00000550841 MIAQ16674 131 aa14.39□□□□□ -0.11
NEK3-202ENST00000550841 ENHOQ6UWT2 76 aa14.39□□□□□ -0.11
NEK3-202ENST00000550841 FA2HQ7L5A8 372 aa14.39□□□□□ -0.11
NEK3-202ENST00000550841 TRGC2P03986 189 aa14.38□□□□□ -0.11
NEK3-202ENST00000550841 RAB5BP61020 215 aa14.38□□□□□ -0.11
NEK3-202ENST00000550841 REG3AQ06141 175 aa14.38□□□□□ -0.11
NEK3-202ENST00000550841 UBE2D4Q9Y2X8 147 aa14.38□□□□□ -0.11
NEK3-202ENST00000550841 PSCAO43653 123 aa14.37□□□□□ -0.11
NEK3-202ENST00000550841 C18orf32Q8TCD1 76 aa14.37□□□□□ -0.11
NEK3-202ENST00000550841 SPANXA1Q9NS26 97 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms