RNA–Protein interactions for RNA: ENST00000550208.1

BRF1-216, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-216ENST00000550208 TMEM70Q9BUB7 260 aa15.12■□□□□ 0.01
BRF1-216ENST00000550208 Q9HAA7 133 aa15.12■□□□□ 0.01
BRF1-216ENST00000550208 I3L3M4 83 aa15.11■□□□□ 0.01
BRF1-216ENST00000550208 RPS10P5Q9NQ39 176 aa15.11■□□□□ 0.01
BRF1-216ENST00000550208 APOC3P02656 99 aa15.1■□□□□ 0.01
BRF1-216ENST00000550208 AMTP48728 403 aa15.1■□□□□ 0.01
BRF1-216ENST00000550208 Q8N976 141 aa15.1■□□□□ 0.01
BRF1-216ENST00000550208 TMEM242Q9NWH2 141 aa15.1■□□□□ 0.01
BRF1-216ENST00000550208 PPP1R17O96001 155 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 PKIAP61925 76 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 RBX1P62877 108 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 LAGE3Q14657 143 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 ELOBQ15370 118 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 RHEBQ15382 184 aa15.09■□□□□ 0.01
BRF1-216ENST00000550208 D6R8Y8 96 aa15.08■□□□□ 0
BRF1-216ENST00000550208 TRAV8-3A0A0A6YYJ7 113 aa15.07■□□□□ 0
BRF1-216ENST00000550208 TRBV27A0A0K0K1C4 114 aa15.07■□□□□ 0
BRF1-216ENST00000550208 VCYO14598 125 aa15.07■□□□□ 0
BRF1-216ENST00000550208 TSHBP01222 138 aa15.07■□□□□ 0
BRF1-216ENST00000550208 SUMO2P61956 95 aaKnown RBP15.07■□□□□ 0
BRF1-216ENST00000550208 TRBV24-1A0A075B6N3 115 aa15.06■□□□□ 0
BRF1-216ENST00000550208 TNFRSF6BO95407 300 aa15.06■□□□□ 0
BRF1-216ENST00000550208 APCSP02743 223 aa15.06■□□□□ 0
BRF1-216ENST00000550208 ANGP03950 147 aaKnown RBP15.06■□□□□ 0
BRF1-216ENST00000550208 UBE2WQ96B02 151 aa15.06■□□□□ 0
BRF1-216ENST00000550208 PKD1P98161 4303 aa15.05■□□□□ 0
BRF1-216ENST00000550208 UBE2L6O14933 153 aa15.05■□□□□ -0
BRF1-216ENST00000550208 S100PP25815 95 aa15.05■□□□□ -0
BRF1-216ENST00000550208 NDUFA5Q16718 116 aa15.05■□□□□ -0
BRF1-216ENST00000550208 ENHOQ6UWT2 76 aa15.05■□□□□ -0
BRF1-216ENST00000550208 TMEM136Q6ZRR5 245 aa15.05■□□□□ -0
BRF1-216ENST00000550208 TRAV9-1A0A075B6T8 112 aa15.04■□□□□ -0
BRF1-216ENST00000550208 NPYP01303 97 aa15.04■□□□□ -0
BRF1-216ENST00000550208 PPBPP02775 128 aa15.04■□□□□ -0
BRF1-216ENST00000550208 C20orf78Q9BR46 151 aa15.04■□□□□ -0
BRF1-216ENST00000550208 DNAH11Q96DT5 4516 aa15.04■□□□□ -0
BRF1-216ENST00000550208 IGLV4-60A0A075B6I1 120 aa15.03■□□□□ -0
BRF1-216ENST00000550208 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.03■□□□□ -0
BRF1-216ENST00000550208 IGKV2-29A2NJV5 120 aaPredicted RBP15.03■□□□□ -0
BRF1-216ENST00000550208 ORMDL3Q8N138 153 aa15.03■□□□□ -0
BRF1-216ENST00000550208 SVBPQ8N300 66 aa15.03■□□□□ -0
BRF1-216ENST00000550208 A0A1B0GUV1 79 aa15.02■□□□□ -0
BRF1-216ENST00000550208 PSCAO43653 123 aa15.02■□□□□ -0
BRF1-216ENST00000550208 SNAPINO95295 136 aa15.02■□□□□ -0
BRF1-216ENST00000550208 ESDP10768 282 aa15.02■□□□□ -0
BRF1-216ENST00000550208 LINC00269Q8N2A0 174 aa15.02■□□□□ -0
BRF1-216ENST00000550208 C20orf203Q8NBC4 194 aa15.02■□□□□ -0
BRF1-216ENST00000550208 PRELID3AQ96N28 172 aa15.02■□□□□ -0
BRF1-216ENST00000550208 TM2D2Q9BX73 214 aa15.02■□□□□ -0
BRF1-216ENST00000550208 BIRC6Q9NR09 4857 aa15.01□□□□□ -0.01
BRF1-216ENST00000550208 Q0VG73 95 aa15.01□□□□□ -0.01
BRF1-216ENST00000550208 A0A087WTM6 91 aa15□□□□□ -0.01
BRF1-216ENST00000550208 PHOX2AO14813 284 aa15□□□□□ -0.01
BRF1-216ENST00000550208 RPL32P62910 135 aaKnown RBP15□□□□□ -0.01
BRF1-216ENST00000550208 IGKV2D-24A0A075B6R9 120 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 H7C423 109 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 FCER1GP30273 86 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 CLPSL2Q6UWE3 100 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 KIR2DL4Q99706 377 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 PRR34Q9NV39 138 aa14.99□□□□□ -0.01
BRF1-216ENST00000550208 HECTD4Q9Y4D8 3996 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 LRCOL1A6NCL2 159 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 CRPP02741 224 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 FGF6P10767 208 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 AMMECR1LQ6DCA0 310 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 MAPKAPK5-AS1Q8N8E1 139 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 RMI2Q96E14 147 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 SMIM2Q9BVW6 85 aa14.98□□□□□ -0.01
BRF1-216ENST00000550208 RNASEKQ6P5S7 137 aaKnown RBP14.97□□□□□ -0.01
BRF1-216ENST00000550208 SPATA12Q7Z6I5 190 aa14.97□□□□□ -0.01
BRF1-216ENST00000550208 KRTAP10-2P60368 255 aa14.96□□□□□ -0.01
BRF1-216ENST00000550208 KIAA1644Q3SXP7 199 aa14.96□□□□□ -0.01
BRF1-216ENST00000550208 GNB1LQ9BYB4 327 aa14.96□□□□□ -0.01
BRF1-216ENST00000550208 COX11Q9Y6N1 276 aa14.96□□□□□ -0.01
BRF1-216ENST00000550208 EREGO14944 169 aa14.95□□□□□ -0.02
BRF1-216ENST00000550208 REG3AQ06141 175 aa14.95□□□□□ -0.02
BRF1-216ENST00000550208 MIAQ16674 131 aa14.95□□□□□ -0.02
BRF1-216ENST00000550208 TGIF2-C20orf24A0A0A6YYL0 155 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 LOC389332A0A1B0GUA5 103 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 PRSS47A8MTI9 375 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 TCAPO15273 167 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 HLA-DQA1P01909 254 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 BAALCQ8WXS3 180 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 C1orf43Q9BWL3 253 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 LAMTOR2Q9Y2Q5 125 aa14.94□□□□□ -0.02
BRF1-216ENST00000550208 DYNC1H1Q14204 4646 aaKnown RBP14.93□□□□□ -0.02
BRF1-216ENST00000550208 FUSP35637 526 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■■■□□ 19.1
BRF1-216ENST00000550208 WFDC2Q14508 124 aa14.92□□□□□ -0.02
BRF1-216ENST00000550208 COX19Q49B96 90 aa14.92□□□□□ -0.02
BRF1-216ENST00000550208 MAP1LC3AQ9H492 121 aa14.92□□□□□ -0.02
BRF1-216ENST00000550208 ZNF25P17030 456 aaPredicted RBP14.91□□□□□ -0.02
BRF1-216ENST00000550208 MRPL52Q86TS9 123 aaKnown RBP14.91□□□□□ -0.02
BRF1-216ENST00000550208 IGLV10-54A0A075B6I4 117 aa14.9□□□□□ -0.02
BRF1-216ENST00000550208 LECT2O14960 151 aa14.9□□□□□ -0.02
BRF1-216ENST00000550208 KRTAP26-1Q6PEX3 210 aa14.9□□□□□ -0.02
BRF1-216ENST00000550208 TMEM101Q96IK0 257 aa14.9□□□□□ -0.02
BRF1-216ENST00000550208 IGKV3OR2-268A0A0C4DH90 116 aa14.89□□□□□ -0.03
BRF1-216ENST00000550208 Q8N8P6 123 aa14.89□□□□□ -0.03
BRF1-216ENST00000550208 OR5A1Q8NGJ0 315 aa14.89□□□□□ -0.03
BRF1-216ENST00000550208 MRPL18Q9H0U6 180 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms