RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 A0A1B0GUT8 65 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 CRPP02741 224 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 RPS10P46783 165 aaKnown RBP6.4□□□□□ -1.38
HDAC7-229ENST00000549883 Q0VG73 95 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 ADIRFQ15847 76 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 TMEM97Q5BJF2 176 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 NUP35Q8NFH5 326 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 RMI2Q96E14 147 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 C1orf43Q9BWL3 253 aa6.4□□□□□ -1.38
HDAC7-229ENST00000549883 SMKR1H3BMG3 65 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 HLA-DQA1P01909 254 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 RAB4AP20338 218 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 AMTP48728 403 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 PEA15Q15121 130 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 AMN1Q8IY45 258 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 NAT8Q9UHE5 227 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
HDAC7-229ENST00000549883 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.38□□□□□ -1.39
HDAC7-229ENST00000549883 IGKV2-29A2NJV5 120 aaPredicted RBP6.38□□□□□ -1.39
HDAC7-229ENST00000549883 FAM231BA6NCW3 169 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 SDHAF1A6NFY7 115 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 USP17L23D6RBM5 183 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 NCR2O95944 276 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 REG3AQ06141 175 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 COTL1Q14019 142 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 MIAQ16674 131 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 FAM74A3Q4VXF1 159 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 SMIM15Q7Z3B0 74 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 ABCA13Q86UQ4 5058 aa6.38□□□□□ -1.39
HDAC7-229ENST00000549883 A0A1B0GUV1 79 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 TSHBP01222 138 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 PRSS1P07477 247 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 PKIAP61925 76 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 BORCS7Q96B45 105 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 TMEM70Q9BUB7 260 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 TMEM242Q9NWH2 141 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 FAT1Q14517 4588 aa6.37□□□□□ -1.39
HDAC7-229ENST00000549883 TRBV6-5A0A0K0K1A5 114 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 SMIM27A0A1W2PRY6 76 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 EPM2AB3EWF7 344 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 Q5VSD8 79 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 Q6ZSA8 131 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 FRZBQ92765 325 aa6.36□□□□□ -1.39
HDAC7-229ENST00000549883 IGKV3OR2-268A0A0C4DH90 116 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 UBE2L6O14933 153 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 PMCHP20382 165 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 CAMPP49913 170 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 POLR2KP53803 58 aaKnown RBP6.35□□□□□ -1.39
HDAC7-229ENST00000549883 IFITM2Q01629 132 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 RIGQ13278 110 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 NRACQ8N912 160 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 ST20Q9HBF5 79 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
HDAC7-229ENST00000549883 I3L3M4 83 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 APCSP02743 223 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 FGF6P10767 208 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 ESDP10768 282 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 MRPL51Q4U2R6 128 aaKnown RBP6.34□□□□□ -1.39
HDAC7-229ENST00000549883 MRPL54Q6P161 138 aaKnown RBP6.34□□□□□ -1.39
HDAC7-229ENST00000549883 RNASEKQ6P5S7 137 aaKnown RBP6.34□□□□□ -1.39
HDAC7-229ENST00000549883 MRAP2Q96G30 205 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 SMDT1Q9H4I9 107 aa6.34□□□□□ -1.39
HDAC7-229ENST00000549883 SLPIP03973 132 aa6.33□□□□□ -1.4
HDAC7-229ENST00000549883 FAM104BQ5XKR9 115 aa6.33□□□□□ -1.4
HDAC7-229ENST00000549883 SCXQ7RTU7 201 aa6.33□□□□□ -1.4
HDAC7-229ENST00000549883 DNAH8Q96JB1 4490 aa6.33□□□□□ -1.4
HDAC7-229ENST00000549883 FLG2Q5D862 2391 aaPredicted RBP6.32□□□□□ -1.4
HDAC7-229ENST00000549883 TRBV27A0A0K0K1C4 114 aa6.32□□□□□ -1.4
HDAC7-229ENST00000549883 A0A1B0GXF2 115 aa6.32□□□□□ -1.4
HDAC7-229ENST00000549883 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
HDAC7-229ENST00000549883 PANO1I0J062 215 aa6.32□□□□□ -1.4
HDAC7-229ENST00000549883 AMMECR1LQ6DCA0 310 aa6.32□□□□□ -1.4
HDAC7-229ENST00000549883 TRAV8-4A0A0B4J246 113 aa6.31□□□□□ -1.4
HDAC7-229ENST00000549883 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
HDAC7-229ENST00000549883 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
HDAC7-229ENST00000549883 C15orf56Q8N910 161 aa6.31□□□□□ -1.4
HDAC7-229ENST00000549883 CHCHD10Q8WYQ3 142 aaPredicted RBP6.31□□□□□ -1.4
HDAC7-229ENST00000549883 H7C423 109 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 NPYP01303 97 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 INAFM2P0DMQ5 153 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 ADCYAP1P18509 176 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 RAB14P61106 215 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 RNASE13Q5GAN3 156 aaKnown RBP6.3□□□□□ -1.4
HDAC7-229ENST00000549883 CLLU1Q5K131 121 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 CIRBP-AS1Q8TBR5 109 aa6.3□□□□□ -1.4
HDAC7-229ENST00000549883 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.3□□□□□ -1.4
HDAC7-229ENST00000549883 hDV102S1A0JD36 115 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 D6R8Y8 96 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 VCYO14598 125 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 CKS2P33552 79 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 HBBP68871 147 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 HIGD2BQ4VC39 106 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 LINC00528Q8N1L1 170 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
HDAC7-229ENST00000549883 LINC00959A0A1B0GUT2 108 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
HDAC7-229ENST00000549883 ZNF25P17030 456 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms