RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 RPL39LQ96EH5 51 aaKnown RBP10.49□□□□□ -0.73
CHMP1A-206ENST00000549139 CHCHD5Q9BSY4 110 aa10.49□□□□□ -0.73
CHMP1A-206ENST00000549139 TRBV6-5A0A0K0K1A5 114 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 TMEM218A2RU14 115 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 MRAP2Q96G30 205 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 Q9HAA7 133 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
CHMP1A-206ENST00000549139 EREGO14944 169 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 MT-ND4LP03901 98 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 COTL1Q14019 142 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 ATRAIDQ6UW56 229 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 TM2D2Q9BX73 214 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 DNAH8Q96JB1 4490 aa10.47□□□□□ -0.73
CHMP1A-206ENST00000549139 PSCAO43653 123 aa10.46□□□□□ -0.73
CHMP1A-206ENST00000549139 MPV17L2Q567V2 206 aa10.46□□□□□ -0.73
CHMP1A-206ENST00000549139 FAM104BQ5XKR9 115 aa10.46□□□□□ -0.73
CHMP1A-206ENST00000549139 A0A087WTM6 91 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 LINC00862A6NCI5 91 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 SDHAF1A6NFY7 115 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 F8W036 122 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 J3QL48 77 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 GAS8-AS1O95177 125 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 NCR2O95944 276 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 S100A8P05109 93 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 ADCYAP1P18509 176 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 CAMPP49913 170 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 Q0VG73 95 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 COMMD7Q86VX2 200 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 ST20Q9HBF5 79 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 COX11Q9Y6N1 276 aa10.45□□□□□ -0.74
CHMP1A-206ENST00000549139 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 PPP1R17O96001 155 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 HBBP68871 147 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 GAGE6Q13070 117 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 MRPL54Q6P161 138 aaKnown RBP10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 RMI2Q96E14 147 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 SEC11CQ9BY50 192 aa10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 LRP1Q07954 4544 aaKnown RBP10.44□□□□□ -0.74
CHMP1A-206ENST00000549139 A0A1B0GUV1 79 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 LRCOL1A6NCL2 159 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 I3L3M4 83 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 ANGP03950 147 aaKnown RBP10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 RPS10P46783 165 aaKnown RBP10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 AMTP48728 403 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 POLR2KP53803 58 aaKnown RBP10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 RBX1P62877 108 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 MRPL51Q4U2R6 128 aaKnown RBP10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 Q8N976 141 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 DEFB104AQ8WTQ1 72 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 UBE2WQ96B02 151 aa10.43□□□□□ -0.74
CHMP1A-206ENST00000549139 PMCHP20382 165 aa10.42□□□□□ -0.74
CHMP1A-206ENST00000549139 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
CHMP1A-206ENST00000549139 TMEM70Q9BUB7 260 aa10.42□□□□□ -0.74
CHMP1A-206ENST00000549139 UBE2L6O14933 153 aa10.41□□□□□ -0.74
CHMP1A-206ENST00000549139 HAMPP81172 84 aa10.41□□□□□ -0.74
CHMP1A-206ENST00000549139 IGKV2D-24A0A075B6R9 120 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 TRBV27A0A0K0K1C4 114 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 SMKR1H3BMG3 65 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 H7C423 109 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 CRPP02741 224 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 APCSP02743 223 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 GCSHP23434 173 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 C10orf91Q5T1B1 145 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 NRACQ8N912 160 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 IMMP2LQ96T52 175 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 CTDSP1Q9GZU7 261 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 PRR34Q9NV39 138 aa10.4□□□□□ -0.74
CHMP1A-206ENST00000549139 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 KRTAP29-1A8MX34 341 aaPredicted RBP10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 VCYO14598 125 aa10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 CKS2P33552 79 aa10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 MIAQ16674 131 aa10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 C20orf203Q8NBC4 194 aa10.39□□□□□ -0.75
CHMP1A-206ENST00000549139 IGLV4-60A0A075B6I1 120 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 ESDP10768 282 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 SUMO2P61956 95 aaKnown RBP10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 BTF3L4Q96K17 158 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 C20orf78Q9BR46 151 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
CHMP1A-206ENST00000549139 TSHBP01222 138 aa10.37□□□□□ -0.75
CHMP1A-206ENST00000549139 PPBPP02775 128 aa10.37□□□□□ -0.75
CHMP1A-206ENST00000549139 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
CHMP1A-206ENST00000549139 REG3AQ06141 175 aa10.36□□□□□ -0.75
CHMP1A-206ENST00000549139 Q8N814 137 aa10.36□□□□□ -0.75
CHMP1A-206ENST00000549139 TMEM242Q9NWH2 141 aa10.36□□□□□ -0.75
CHMP1A-206ENST00000549139 CARHSP1Q9Y2V2 147 aaKnown RBP10.36□□□□□ -0.75
CHMP1A-206ENST00000549139 D6R8Y8 96 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 PHOX2AO14813 284 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 TNFRSF6BO95407 300 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 AMMECR1LQ6DCA0 310 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 BAALCQ8WXS3 180 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 KIR2DL4Q99706 377 aa10.35□□□□□ -0.75
CHMP1A-206ENST00000549139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.34□□□□□ -0.75
CHMP1A-206ENST00000549139 TRAV9-1A0A075B6T8 112 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms