RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 PRELID3AQ96N28 172 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 C20orf78Q9BR46 151 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 CHCHD5Q9BSY4 110 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 SMCO4Q9NRQ5 59 aa9.26□□□□□ -0.93
SP140-213ENST00000543928 TRBV27A0A0K0K1C4 114 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 PHOX2AO14813 284 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 IGHV3-33P01772 117 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 APCSP02743 223 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 IGHV3-30-3P0DP02 117 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 IQCJQ1A5X6 159 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 NIT1Q86X76 327 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 Q8N3U1 123 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 YPEL4Q96NS1 127 aa9.25□□□□□ -0.93
SP140-213ENST00000543928 TRAV9-2A0A087WT02 112 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 VCYO14598 125 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 MT-ND6P03923 174 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 AMTP48728 403 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 KIAA1644Q3SXP7 199 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 TMEM243Q9BU79 118 aa9.24□□□□□ -0.93
SP140-213ENST00000543928 A0A087WX48 190 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 K7EP13 123 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 TSHBP01222 138 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 RPL32P62910 135 aaKnown RBP9.23□□□□□ -0.93
SP140-213ENST00000543928 GAGE6Q13070 117 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 C10orf126Q8N4M7 172 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 SMIM2Q9BVW6 85 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
SP140-213ENST00000543928 LAMTOR2Q9Y2Q5 125 aa9.23□□□□□ -0.93
SP140-213ENST00000543928 DNAH2Q9P225 4427 aa9.22□□□□□ -0.93
SP140-213ENST00000543928 PKIAP61925 76 aa9.22□□□□□ -0.93
SP140-213ENST00000543928 KIR2DL4Q99706 377 aa9.22□□□□□ -0.93
SP140-213ENST00000543928 DNAH10Q8IVF4 4471 aa9.22□□□□□ -0.93
SP140-213ENST00000543928 UBE2L6O14933 153 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 FCER1GP30273 86 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 FABP9Q0Z7S8 132 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 MPV17L2Q567V2 206 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 C1orf134Q5TEV5 83 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 MAP1LC3AQ9H492 121 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
SP140-213ENST00000543928 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
SP140-213ENST00000543928 C6orf223Q8N319 242 aa9.2□□□□□ -0.94
SP140-213ENST00000543928 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.19□□□□□ -0.94
SP140-213ENST00000543928 IGKV2-29A2NJV5 120 aaPredicted RBP9.19□□□□□ -0.94
SP140-213ENST00000543928 PRSS47A8MTI9 375 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 IBA57-AS1B1ANH7 110 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 SCO1O75880 301 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 ESDP10768 282 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 RBX1P62877 108 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 TNP2Q05952 138 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 LCE2AQ5TA79 106 aaPredicted RBP9.19□□□□□ -0.94
SP140-213ENST00000543928 Q8N976 141 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 KLK12Q9UKR0 248 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
SP140-213ENST00000543928 TCAPO15273 167 aa9.18□□□□□ -0.94
SP140-213ENST00000543928 BTF3P20290 206 aaKnown RBP9.18□□□□□ -0.94
SP140-213ENST00000543928 ALKBH7Q9BT30 221 aaPredicted RBP9.18□□□□□ -0.94
SP140-213ENST00000543928 H7C423 109 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 RTL8CO15255 209 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 ANGP03950 147 aaKnown RBP9.17□□□□□ -0.94
SP140-213ENST00000543928 LAGE3Q14657 143 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 AMMECR1LQ6DCA0 310 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 Q8N8P6 123 aa9.17□□□□□ -0.94
SP140-213ENST00000543928 DNAH17Q9UFH2 4485 aa9.16□□□□□ -0.94
SP140-213ENST00000543928 A0A1B0GUV1 79 aa9.16□□□□□ -0.94
SP140-213ENST00000543928 FGF6P10767 208 aa9.16□□□□□ -0.94
SP140-213ENST00000543928 RAB5AP20339 215 aa9.16□□□□□ -0.94
SP140-213ENST00000543928 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
SP140-213ENST00000543928 Q9HAA7 133 aa9.16□□□□□ -0.94
SP140-213ENST00000543928 IGLV4-60A0A075B6I1 120 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 COLCA2A8K830 154 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 S100A1P23297 94 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.94
SP140-213ENST00000543928 NFE4Q86UQ8 179 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 C20orf203Q8NBC4 194 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 UBE2WQ96B02 151 aa9.15□□□□□ -0.94
SP140-213ENST00000543928 NXT2Q9NPJ8 142 aaKnown RBP9.15□□□□□ -0.94
SP140-213ENST00000543928 TRAV8-3A0A0A6YYJ7 113 aa9.14□□□□□ -0.95
SP140-213ENST00000543928 CRPP02741 224 aa9.14□□□□□ -0.95
SP140-213ENST00000543928 CLPSL2Q6UWE3 100 aa9.14□□□□□ -0.95
SP140-213ENST00000543928 LINC00269Q8N2A0 174 aa9.14□□□□□ -0.95
SP140-213ENST00000543928 ZNF25P17030 456 aaPredicted RBP9.13□□□□□ -0.95
SP140-213ENST00000543928 ENHOQ6UWT2 76 aa9.13□□□□□ -0.95
SP140-213ENST00000543928 Q6ZRN7 208 aaPredicted RBP9.13□□□□□ -0.95
SP140-213ENST00000543928 PRSS3P2Q8NHM4 247 aa9.13□□□□□ -0.95
SP140-213ENST00000543928 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
SP140-213ENST00000543928 FAT2Q9NYQ8 4349 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 RPL39P62891 51 aaKnown RBP9.12□□□□□ -0.95
SP140-213ENST00000543928 REG3AQ06141 175 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 Q0VG73 95 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 LINC00336Q6ZUF6 198 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
SP140-213ENST00000543928 OR5A1Q8NGJ0 315 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
SP140-213ENST00000543928 TMEM101Q96IK0 257 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms