RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TRAV9-1A0A075B6T8 112 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 TRBV27A0A0K0K1C4 114 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 UBE2L6O14933 153 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 PPBPP02775 128 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 MRPL51Q4U2R6 128 aaKnown RBP11.98□□□□□ -0.49
TSFM-208ENST00000543727 ATRAIDQ6UW56 229 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 TMEM70Q9BUB7 260 aa11.98□□□□□ -0.49
TSFM-208ENST00000543727 CRPP02741 224 aa11.97□□□□□ -0.49
TSFM-208ENST00000543727 APCSP02743 223 aa11.97□□□□□ -0.49
TSFM-208ENST00000543727 POLR2KP53803 58 aaKnown RBP11.97□□□□□ -0.49
TSFM-208ENST00000543727 FAT2Q9NYQ8 4349 aa11.97□□□□□ -0.49
TSFM-208ENST00000543727 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 PHOX2AO14813 284 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 ANGP03950 147 aaKnown RBP11.96□□□□□ -0.49
TSFM-208ENST00000543727 PMCHP20382 165 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 RPS10P46783 165 aaKnown RBP11.96□□□□□ -0.49
TSFM-208ENST00000543727 SUMO2P61956 95 aaKnown RBP11.96□□□□□ -0.49
TSFM-208ENST00000543727 RBX1P62877 108 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 RPL32P62910 135 aaKnown RBP11.96□□□□□ -0.49
TSFM-208ENST00000543727 GAGE6Q13070 117 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 RHEBQ15382 184 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 NRACQ8N912 160 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 C20orf78Q9BR46 151 aa11.96□□□□□ -0.49
TSFM-208ENST00000543727 EPPK1P58107 5090 aaKnown RBP11.96□□□□□ -0.5
TSFM-208ENST00000543727 A0A087WTM6 91 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 TCAPO15273 167 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 CKS2P33552 79 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 MIAQ16674 131 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 CDPF1Q6NVV7 123 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 UBE2WQ96B02 151 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 PRR34Q9NV39 138 aa11.95□□□□□ -0.5
TSFM-208ENST00000543727 VCYO14598 125 aa11.94□□□□□ -0.5
TSFM-208ENST00000543727 GAS8-AS1O95177 125 aa11.94□□□□□ -0.5
TSFM-208ENST00000543727 Q8N976 141 aa11.94□□□□□ -0.5
TSFM-208ENST00000543727 DNAH17Q9UFH2 4485 aa11.94□□□□□ -0.5
TSFM-208ENST00000543727 ZNF25P17030 456 aaPredicted RBP11.93□□□□□ -0.5
TSFM-208ENST00000543727 S100PP25815 95 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 NDUFA5Q16718 116 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 ORMDL3Q8N138 153 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 KIR2DL4Q99706 377 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 C1orf43Q9BWL3 253 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 LAMTOR2Q9Y2Q5 125 aa11.93□□□□□ -0.5
TSFM-208ENST00000543727 SMKR1H3BMG3 65 aa11.92□□□□□ -0.5
TSFM-208ENST00000543727 TSHBP01222 138 aa11.92□□□□□ -0.5
TSFM-208ENST00000543727 SPATA12Q7Z6I5 190 aa11.92□□□□□ -0.5
TSFM-208ENST00000543727 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
TSFM-208ENST00000543727 IGKV2D-24A0A075B6R9 120 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 LRCOL1A6NCL2 159 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 D6R8Y8 96 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 ESDP10768 282 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 SMAGPQ0VAQ4 97 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 ENHOQ6UWT2 76 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
TSFM-208ENST00000543727 C7orf77A4D0Y5 90 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 TNFRSF6BO95407 300 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 FCER1GP30273 86 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 LINC00269Q8N2A0 174 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
TSFM-208ENST00000543727 PKD1P98161 4303 aa11.9□□□□□ -0.5
TSFM-208ENST00000543727 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
TSFM-208ENST00000543727 C16orf90A8MZG2 172 aa11.89□□□□□ -0.51
TSFM-208ENST00000543727 REG3AQ06141 175 aa11.89□□□□□ -0.51
TSFM-208ENST00000543727 SVBPQ8N300 66 aa11.89□□□□□ -0.51
TSFM-208ENST00000543727 C20orf203Q8NBC4 194 aa11.89□□□□□ -0.51
TSFM-208ENST00000543727 SNAPINO95295 136 aa11.88□□□□□ -0.51
TSFM-208ENST00000543727 COX19Q49B96 90 aa11.88□□□□□ -0.51
TSFM-208ENST00000543727 TMEM136Q6ZRR5 245 aa11.88□□□□□ -0.51
TSFM-208ENST00000543727 MRPL52Q86TS9 123 aaKnown RBP11.88□□□□□ -0.51
TSFM-208ENST00000543727 SMIM2Q9BVW6 85 aa11.88□□□□□ -0.51
TSFM-208ENST00000543727 IGLV4-60A0A075B6I1 120 aa11.87□□□□□ -0.51
TSFM-208ENST00000543727 FGF6P10767 208 aa11.87□□□□□ -0.51
TSFM-208ENST00000543727 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
TSFM-208ENST00000543727 TMEM101Q96IK0 257 aa11.87□□□□□ -0.51
TSFM-208ENST00000543727 PRELID3AQ96N28 172 aa11.87□□□□□ -0.51
TSFM-208ENST00000543727 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.86□□□□□ -0.51
TSFM-208ENST00000543727 IGKV2-29A2NJV5 120 aaPredicted RBP11.86□□□□□ -0.51
TSFM-208ENST00000543727 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 NPYP01303 97 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 HLA-DQA1P01909 254 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 KRTAP10-2P60368 255 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 Q8N814 137 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 DEFB104AQ8WTQ1 72 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 PKHD1P08F94 4074 aa11.86□□□□□ -0.51
TSFM-208ENST00000543727 APOC3P02656 99 aa11.85□□□□□ -0.51
TSFM-208ENST00000543727 RNASEKQ6P5S7 137 aaKnown RBP11.85□□□□□ -0.51
TSFM-208ENST00000543727 CSDC2Q9Y534 153 aaKnown RBP11.85□□□□□ -0.51
TSFM-208ENST00000543727 C14orf177Q52M58 125 aa11.84□□□□□ -0.51
TSFM-208ENST00000543727 GNB1LQ9BYB4 327 aa11.84□□□□□ -0.51
TSFM-208ENST00000543727 MT-ND6P03923 174 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 CLPSL2Q6UWE3 100 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 MAPKAPK5-AS1Q8N8E1 139 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 OR5A1Q8NGJ0 315 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 TIMM21Q9BVV7 248 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 MAP1LC3AQ9H492 121 aa11.83□□□□□ -0.52
TSFM-208ENST00000543727 K7EMI3 77 aa11.82□□□□□ -0.52
TSFM-208ENST00000543727 BIRC6Q9NR09 4857 aa11.8□□□□□ -0.52
TSFM-208ENST00000543727 RAB5AP20339 215 aa11.8□□□□□ -0.52
TSFM-208ENST00000543727 DGAT2L7PQ6IED9 249 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms