RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 NUDT3O95989 172 aa7.43□□□□□ -1.22
DDB1-221ENST00000543162 ESDP10768 282 aa7.43□□□□□ -1.22
DDB1-221ENST00000543162 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
DDB1-221ENST00000543162 C5orf52A6NGY3 159 aa7.42□□□□□ -1.22
DDB1-221ENST00000543162 PMCHL1Q16048 86 aa7.42□□□□□ -1.22
DDB1-221ENST00000543162 TMEM97Q5BJF2 176 aa7.42□□□□□ -1.22
DDB1-221ENST00000543162 PDZD11Q5EBL8 140 aa7.42□□□□□ -1.22
DDB1-221ENST00000543162 FAM19A2Q8N3H0 131 aa7.42□□□□□ -1.22
DDB1-221ENST00000543162 IGHV1-24A0A0C4DH33 117 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 IGLL5B9A064 214 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 BTF3P20290 206 aaKnown RBP7.41□□□□□ -1.22
DDB1-221ENST00000543162 G0S2P27469 103 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 S100A2P29034 98 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 AMTP48728 403 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 HIST3H2BBQ8N257 126 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 C15orf53Q8NAA6 179 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 GTSF1LQ9H1H1 148 aa7.41□□□□□ -1.22
DDB1-221ENST00000543162 TRBV6-8A0A0A6YYG3 113 aa7.4□□□□□ -1.22
DDB1-221ENST00000543162 NUPR2A6NF83 97 aa7.4□□□□□ -1.22
DDB1-221ENST00000543162 HBDP02042 147 aa7.4□□□□□ -1.22
DDB1-221ENST00000543162 CEMP1Q6PRD7 247 aaPredicted RBP7.4□□□□□ -1.22
DDB1-221ENST00000543162 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 A0A096LNJ9 63 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 C2orf66Q6UXQ4 117 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 C20orf203Q8NBC4 194 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 TMEM18Q96B42 140 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 TMEM243Q9BU79 118 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 CHCHD7Q9BUK0 85 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 CYSLTR1Q9Y271 337 aa7.39□□□□□ -1.23
DDB1-221ENST00000543162 KLK5Q9Y337 293 aaPredicted RBP7.39□□□□□ -1.23
DDB1-221ENST00000543162 LINC01549A6NIU2 74 aa7.38□□□□□ -1.23
DDB1-221ENST00000543162 TIRAPP58753 221 aa7.38□□□□□ -1.23
DDB1-221ENST00000543162 LYPD5Q6UWN5 251 aa7.38□□□□□ -1.23
DDB1-221ENST00000543162 TOMM6Q96B49 74 aa7.38□□□□□ -1.23
DDB1-221ENST00000543162 HIST1H2BLQ99880 126 aa7.38□□□□□ -1.23
DDB1-221ENST00000543162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.37□□□□□ -1.23
DDB1-221ENST00000543162 IGKV2-29A2NJV5 120 aaPredicted RBP7.37□□□□□ -1.23
DDB1-221ENST00000543162 UBE2L6O14933 153 aa7.37□□□□□ -1.23
DDB1-221ENST00000543162 LEPROTL1O95214 131 aa7.37□□□□□ -1.23
DDB1-221ENST00000543162 FABP4P15090 132 aa7.37□□□□□ -1.23
DDB1-221ENST00000543162 RPL39P62891 51 aaKnown RBP7.37□□□□□ -1.23
DDB1-221ENST00000543162 PACRGQ96M98 296 aaPredicted RBP7.37□□□□□ -1.23
DDB1-221ENST00000543162 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
DDB1-221ENST00000543162 HSPB8Q9UJY1 196 aa7.37□□□□□ -1.23
DDB1-221ENST00000543162 IFITM10A6NMD0 228 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 SMAGPQ0VAQ4 97 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 ESRGQ1W209 222 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 LELP1Q5T871 98 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 MUC7Q8TAX7 377 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 WWC2-AS2Q96NR7 200 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 SCGB3A1Q96QR1 104 aa7.36□□□□□ -1.23
DDB1-221ENST00000543162 TGP01266 2768 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 TRAV8-6A0A0B4J262 113 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 H7C423 109 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 ATP5LO75964 103 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 GAGE6Q13070 117 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 AMMECR1LQ6DCA0 310 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 ZFAND6Q6FIF0 208 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 ERASQ7Z444 233 aa7.35□□□□□ -1.23
DDB1-221ENST00000543162 TMEM262E9PQX1 116 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.34□□□□□ -1.23
DDB1-221ENST00000543162 FGF6P10767 208 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 CCL18P55774 89 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 TCTAP57738 103 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 DGAT2L7PQ6IED9 249 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 LINC00173Q6ZV60 143 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 IFI27L1Q96BM0 104 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 TMEM141Q96I45 108 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 TIMM21Q9BVV7 248 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 SPANXA1Q9NS26 97 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
DDB1-221ENST00000543162 IGIPA6NJ69 53 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 PKIAP61925 76 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 MRPL52Q86TS9 123 aaKnown RBP7.33□□□□□ -1.24
DDB1-221ENST00000543162 OR10D4PQ8NGN7 298 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 TMEM101Q96IK0 257 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 TIMM17AQ99595 171 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 MAP1LC3CQ9BXW4 147 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 PYGO1Q9Y3Y4 419 aa7.33□□□□□ -1.24
DDB1-221ENST00000543162 ZNF25P17030 456 aaPredicted RBP7.32□□□□□ -1.24
DDB1-221ENST00000543162 KRTDAPP60985 99 aa7.32□□□□□ -1.24
DDB1-221ENST00000543162 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
DDB1-221ENST00000543162 Q6ZN92 141 aa7.32□□□□□ -1.24
DDB1-221ENST00000543162 OR5A1Q8NGJ0 315 aa7.32□□□□□ -1.24
DDB1-221ENST00000543162 MRPS16Q9Y3D3 137 aaKnown RBP7.32□□□□□ -1.24
DDB1-221ENST00000543162 LINC00588Q9Y4M8 146 aa7.32□□□□□ -1.24
DDB1-221ENST00000543162 CSDC2Q9Y534 153 aaKnown RBP7.32□□□□□ -1.24
DDB1-221ENST00000543162 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 A0A087WX48 190 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 PRSS1P07477 247 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 NPSP0C0P6 89 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 RBX1P62877 108 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 MRPS36P82909 103 aaKnown RBP7.31□□□□□ -1.24
DDB1-221ENST00000543162 WFDC10BQ8IUB3 73 aa7.31□□□□□ -1.24
DDB1-221ENST00000543162 OPRPNQ99935 248 aaPredicted RBP7.31□□□□□ -1.24
DDB1-221ENST00000543162 A0A1B0GUV1 79 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 LOC105371267A0A1B0GV96 52 aa7.3□□□□□ -1.24
DDB1-221ENST00000543162 H0Y8G0 127 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms