RNA–Protein interactions for RNA: ENST00000541970.5

PDCD2-208, Transcript of programmed cell death 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD2, Length 3,378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-208ENST00000541970 LOC107984640A0A0U1RRK4 108 aa12.52□□□□□ -0.4
PDCD2-208ENST00000541970 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.41
PDCD2-208ENST00000541970 TRBV7-1A0A0A6YYK4 115 aa12.52□□□□□ -0.41
PDCD2-208ENST00000541970 EBI3Q14213 229 aa12.51□□□□□ -0.41
PDCD2-208ENST00000541970 C20orf173Q96LM9 149 aa12.51□□□□□ -0.41
PDCD2-208ENST00000541970 RHPN1-AS1Q9BWJ2 59 aa12.51□□□□□ -0.41
PDCD2-208ENST00000541970 KLK5Q9Y337 293 aaPredicted RBP12.51□□□□□ -0.41
PDCD2-208ENST00000541970 RS1O15537 224 aa12.51□□□□□ -0.41
PDCD2-208ENST00000541970 M0R2P5 195 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 LINC00694P0DN24 101 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 DAND5Q8N907 189 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 ZFAND3Q9H8U3 227 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 IGIPA6NJ69 53 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 B4DSR2 109 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 VCYO14598 125 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 SUMO4Q6EEV6 95 aa12.5□□□□□ -0.41
PDCD2-208ENST00000541970 H7C423 109 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 TMEM101Q96IK0 257 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 ICOSQ9Y6W8 199 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 CEMP1Q6PRD7 247 aaPredicted RBP12.49□□□□□ -0.41
PDCD2-208ENST00000541970 NF1P21359 2839 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 IGHV4-4A0A075B6R2 117 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 HIST2H2BCQ6DN03 193 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 GPHB5Q86YW7 130 aa12.49□□□□□ -0.41
PDCD2-208ENST00000541970 FLNAP21333 2647 aaKnown RBP12.48□□□□□ -0.41
PDCD2-208ENST00000541970 PPP1R17O96001 155 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 Q6Q795 121 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 LINC00477Q96M19 166 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 HECTD1Q9ULT8 2610 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 CLPSL1A2RUU4 121 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 A8MZ25 164 aa12.48□□□□□ -0.41
PDCD2-208ENST00000541970 A0A0B4J2C4 111 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 P0DMU3 169 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 FAM231AP0DMU4 169 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 FAM231CP0DMU5 169 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 ZFAND2AQ8N6M9 145 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 TMEM141Q96I45 108 aa12.47□□□□□ -0.41
PDCD2-208ENST00000541970 DEFB136Q30KP8 78 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 ZNF876PQ49A33 203 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 FBN2P35556 2912 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 TRAV12-2A0A075B6T6 113 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 LEPROTO15243 131 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 SYNJ2BPP57105 145 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 AMELXQ99217 191 aa12.46□□□□□ -0.41
PDCD2-208ENST00000541970 A0A0J9YXY3 114 aa12.46□□□□□ -0.42
PDCD2-208ENST00000541970 TIMM21Q9BVV7 248 aa12.45□□□□□ -0.42
PDCD2-208ENST00000541970 MUC4Q99102 2169 aa12.45□□□□□ -0.42
PDCD2-208ENST00000541970 RNASE3P12724 160 aaKnown RBP12.44□□□□□ -0.42
PDCD2-208ENST00000541970 IGHV3-73A0A0B4J1V6 119 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 EDA2RQ9HAV5 297 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 CHD6Q8TD26 2715 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 A0A1W2PRX2 142 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 KRTAP10-9P60411 292 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 ZNF625Q96I27 306 aaPredicted RBP12.44□□□□□ -0.42
PDCD2-208ENST00000541970 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
PDCD2-208ENST00000541970 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 BBC3Q96PG8 261 aaPredicted RBP12.43□□□□□ -0.42
PDCD2-208ENST00000541970 TMEM126AQ9H061 195 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 ITPR3Q14573 2671 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 LINC01587Q99440 93 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 TIMM17AQ99595 171 aa12.43□□□□□ -0.42
PDCD2-208ENST00000541970 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 IGHV3-30-3P0DP02 117 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 CD28P10747 220 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
PDCD2-208ENST00000541970 ADAMTSL4-AS1Q5T5F5 129 aa12.41□□□□□ -0.42
PDCD2-208ENST00000541970 TRBV30A0A0K0K1B3 111 aa12.41□□□□□ -0.42
PDCD2-208ENST00000541970 I3L3M4 83 aa12.41□□□□□ -0.42
PDCD2-208ENST00000541970 POLR2KP53803 58 aaKnown RBP12.41□□□□□ -0.42
PDCD2-208ENST00000541970 HERVK_113P63121 156 aa12.41□□□□□ -0.42
PDCD2-208ENST00000541970 HELZ2Q9BYK8 2649 aaKnown RBP12.4□□□□□ -0.42
PDCD2-208ENST00000541970 DAZ1Q9NQZ3 744 aaKnown RBP12.4□□□□□ -0.42
PDCD2-208ENST00000541970 H3BT86 120 aa12.39□□□□□ -0.43
PDCD2-208ENST00000541970 KLK9Q9UKQ9 250 aa12.39□□□□□ -0.43
PDCD2-208ENST00000541970 IGHG2P01859 326 aa12.38□□□□□ -0.43
PDCD2-208ENST00000541970 LINC01356Q8N9X3 169 aa12.38□□□□□ -0.43
PDCD2-208ENST00000541970 CSDC2Q9Y534 153 aaKnown RBP12.38□□□□□ -0.43
PDCD2-208ENST00000541970 IGHV3OR16-12A0A075B7B8 117 aa12.38□□□□□ -0.43
PDCD2-208ENST00000541970 SPINK13Q1W4C9 94 aa12.38□□□□□ -0.43
PDCD2-208ENST00000541970 NDUFA4O00483 81 aa12.37□□□□□ -0.43
PDCD2-208ENST00000541970 OVOL1O14753 267 aa12.37□□□□□ -0.43
PDCD2-208ENST00000541970 A6NDX4 124 aa12.37□□□□□ -0.43
PDCD2-208ENST00000541970 NDUFA7O95182 113 aa12.37□□□□□ -0.43
PDCD2-208ENST00000541970 MRPL53Q96EL3 112 aaKnown RBP12.37□□□□□ -0.43
PDCD2-208ENST00000541970 USMG5Q96IX5 58 aa12.36□□□□□ -0.43
PDCD2-208ENST00000541970 Q96MF0 132 aa12.36□□□□□ -0.43
PDCD2-208ENST00000541970 GAGE2AQ6NT46 116 aa12.36□□□□□ -0.43
PDCD2-208ENST00000541970 SPANXA1Q9NS26 97 aa12.36□□□□□ -0.43
PDCD2-208ENST00000541970 LINC00315P59091 139 aa12.35□□□□□ -0.43
PDCD2-208ENST00000541970 C3orf22Q8N5N4 141 aa12.35□□□□□ -0.43
PDCD2-208ENST00000541970 RHOHQ15669 191 aa12.34□□□□□ -0.43
PDCD2-208ENST00000541970 LST1O00453 97 aa12.34□□□□□ -0.43
PDCD2-208ENST00000541970 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.43
PDCD2-208ENST00000541970 TRAV13-1A0A0B4J241 112 aa12.33□□□□□ -0.43
PDCD2-208ENST00000541970 PRM2P04554 102 aa12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms