RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 FAM159AQ6UWV7 190 aa11.21□□□□□ -0.61
CLPTM1-202ENST00000541297 RBMY1BA6NDE4 496 aaKnown RBP11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 RBMY1EA6NEQ0 496 aaKnown RBP11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 RBMY1DP0C7P1 496 aaKnown RBP11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 SHISA2Q6UWI4 295 aa11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 DPH3P1Q9H4G8 78 aa11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.62
CLPTM1-202ENST00000541297 TSPAN13O95857 204 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 GEMIN7Q9H840 131 aaKnown RBP11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 MUC4Q99102 2169 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 ASIPP42127 132 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 UBE2D1P51668 147 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 SPATA3Q8NHX4 192 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 DEFB104AQ8WTQ1 72 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 PTH2Q96A98 100 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 PHLDA3Q9Y5J5 127 aa11.2□□□□□ -0.62
CLPTM1-202ENST00000541297 IGLV1-51P01701 117 aa11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 CD7P09564 240 aa11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 EMP1P54849 157 aa11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-202ENST00000541297 CRYGDP07320 174 aa11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 RBMY1A1P0DJD3 496 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 RBMY1CP0DJD4 496 aa11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 RNASE3P12724 160 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 RBMY1FQ15415 496 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
CLPTM1-202ENST00000541297 HTN1P15515 57 aa11.17□□□□□ -0.62
CLPTM1-202ENST00000541297 WFDC10AQ9H1F0 79 aa11.17□□□□□ -0.62
CLPTM1-202ENST00000541297 C11orf86A6NJI1 115 aa11.16□□□□□ -0.62
CLPTM1-202ENST00000541297 UBE2D3P61077 147 aa11.16□□□□□ -0.62
CLPTM1-202ENST00000541297 UBE2D2P62837 147 aa11.16□□□□□ -0.62
CLPTM1-202ENST00000541297 CITED1Q99966 193 aa11.16□□□□□ -0.62
CLPTM1-202ENST00000541297 TSHBP01222 138 aa11.16□□□□□ -0.62
CLPTM1-202ENST00000541297 MT-ATP8P03928 68 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 PRM2P04554 102 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 SPINK8P0C7L1 97 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 STHQ8IWL8 128 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 Q8N1Y9 231 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 IGLV4-69A0A075B6H9 119 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
CLPTM1-202ENST00000541297 IGHV1OR15-1A0A075B7D0 117 aa11.15□□□□□ -0.63
CLPTM1-202ENST00000541297 A0A0J9YY99 117 aa11.15□□□□□ -0.63
CLPTM1-202ENST00000541297 A8MTW9 85 aa11.15□□□□□ -0.63
CLPTM1-202ENST00000541297 MDFICQ9P1T7 246 aa11.15□□□□□ -0.63
CLPTM1-202ENST00000541297 MAST4O15021 2626 aa11.14□□□□□ -0.63
CLPTM1-202ENST00000541297 TCL1BO95988 128 aa11.14□□□□□ -0.63
CLPTM1-202ENST00000541297 TP53TG1Q9Y2A0 90 aa11.14□□□□□ -0.63
CLPTM1-202ENST00000541297 XGP55808 180 aa11.13□□□□□ -0.63
CLPTM1-202ENST00000541297 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
CLPTM1-202ENST00000541297 RPL39P62891 51 aaKnown RBP11.13□□□□□ -0.63
CLPTM1-202ENST00000541297 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
CLPTM1-202ENST00000541297 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 CFC1P0CG37 223 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 TSPEAR-AS2P59090 65 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 Q6ZUT4 128 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 IGHV3-16A0A0C4DH30 117 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 IGIPA6NJ69 53 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 PPDPFLQ8WWR9 84 aa11.12□□□□□ -0.63
CLPTM1-202ENST00000541297 IGHV3-30P01768 117 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 IGHV3-30-5P0DP03 117 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 MED14OSP0DP75 135 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 HERVK_113P61574 105 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 BEAN1Q3B7T3 259 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 TEN1Q86WV5 123 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 JPT2Q9H910 190 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 PPP1R17O96001 155 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 LINC00315P59091 139 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 PMVKQ15126 192 aa11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 TRPT1Q86TN4 253 aaKnown RBP11.11□□□□□ -0.63
CLPTM1-202ENST00000541297 TMEM170BQ5T4T1 132 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 LYRM7Q5U5X0 104 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 KIF25-AS1Q9Y6Z4 181 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 STAB1Q9NY15 2570 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 RNF183Q96D59 192 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 C19orf73Q9NVV2 129 aa11.1□□□□□ -0.63
CLPTM1-202ENST00000541297 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 PAPPA-AS1Q5QFB9 102 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 SLC25A29Q8N8R3 303 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 ZNRF2Q8NHG8 242 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 RPL35AP18077 110 aaKnown RBP11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 POM121L12Q8N7R1 296 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 LINC01587Q99440 93 aa11.09□□□□□ -0.63
CLPTM1-202ENST00000541297 A8MWV9 139 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 INSP01308 110 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 SCGB1C2P0DMR2 95 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 POLR2KP53803 58 aaKnown RBP11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 C9orf85Q96MD7 179 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 KIR2DL4Q99706 377 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 TRBV20-1A0A075B6N2 111 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 A0A087WWL8 130 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 SUMO4Q6EEV6 95 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 PRIMA1Q86XR5 153 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 SBSPONQ8IVN8 264 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 ANKRD29Q8N6D5 301 aa11.08□□□□□ -0.64
CLPTM1-202ENST00000541297 TRGV11A0A075B6L2 103 aa11.07□□□□□ -0.64
CLPTM1-202ENST00000541297 HERV-K104P63124 156 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms