RNA–Protein interactions for RNA: ENST00000541167.5

RAP1B-223, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-223	ENST00000541167	TRBV6-5	A0A0K0K1A5	114 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167		F8W036	122 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	NCR2	O95944	276 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	S100A8	P05109	93 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	ADCYAP1	P18509	176 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	RBX1	P62877	108 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	HBB	P68871	147 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	ST20	Q9HBF5	79 aa		13.38	□□□□□ -0.27
RAP1B-223	ENST00000541167	IGKV2D-24	A0A075B6R9	120 aa		13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167	SMKR1	H3BMG3	65 aa		13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167	UBE2L6	O14933	153 aa		13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167	RPS10	P46783	165 aa	Known RBP	13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167		Q0VG73	95 aa		13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167	FAM104B	Q5XKR9	115 aa		13.37	□□□□□ -0.27
RAP1B-223	ENST00000541167	APCS	P02743	223 aa		13.36	□□□□□ -0.27
RAP1B-223	ENST00000541167	PMCH	P20382	165 aa		13.36	□□□□□ -0.27
RAP1B-223	ENST00000541167	COX11	Q9Y6N1	276 aa		13.36	□□□□□ -0.27
RAP1B-223	ENST00000541167		A0A1B0GXF2	115 aa		13.35	□□□□□ -0.27
RAP1B-223	ENST00000541167	LRCOL1	A6NCL2	159 aa		13.35	□□□□□ -0.27
RAP1B-223	ENST00000541167		I3L3M4	83 aa		13.35	□□□□□ -0.27
RAP1B-223	ENST00000541167	MRPL51	Q4U2R6	128 aa	Known RBP	13.35	□□□□□ -0.27
RAP1B-223	ENST00000541167	TMEM70	Q9BUB7	260 aa		13.35	□□□□□ -0.27
RAP1B-223	ENST00000541167	FUS	P35637	526 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
RAP1B-223	ENST00000541167	CLPSL2	Q6UWE3	100 aa		13.34	□□□□□ -0.27
RAP1B-223	ENST00000541167	ENHO	Q6UWT2	76 aa		13.34	□□□□□ -0.27
RAP1B-223	ENST00000541167	ATP5L2	Q7Z4Y8	100 aa		13.34	□□□□□ -0.27
RAP1B-223	ENST00000541167	PGPEP1	Q9NXJ5	209 aa		13.34	□□□□□ -0.27
RAP1B-223	ENST00000541167	LINC00862	A6NCI5	91 aa		13.33	□□□□□ -0.28
RAP1B-223	ENST00000541167	PPP1R17	O96001	155 aa		13.33	□□□□□ -0.28
RAP1B-223	ENST00000541167	LINC00269	Q8N2A0	174 aa		13.33	□□□□□ -0.28
RAP1B-223	ENST00000541167	C1orf43	Q9BWL3	253 aa		13.33	□□□□□ -0.28
RAP1B-223	ENST00000541167	SEC11C	Q9BY50	192 aa		13.33	□□□□□ -0.28
RAP1B-223	ENST00000541167	CKS2	P33552	79 aa		13.32	□□□□□ -0.28
RAP1B-223	ENST00000541167	CDPF1	Q6NVV7	123 aa		13.32	□□□□□ -0.28
RAP1B-223	ENST00000541167	NRAC	Q8N912	160 aa		13.32	□□□□□ -0.28
RAP1B-223	ENST00000541167	TMEM242	Q9NWH2	141 aa		13.32	□□□□□ -0.28
RAP1B-223	ENST00000541167	RYR1	P21817	5038 aa		13.32	□□□□□ -0.28
RAP1B-223	ENST00000541167		A0A1B0GUV1	79 aa		13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	POLR2K	P53803	58 aa	Known RBP	13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	MIA	Q16674	131 aa		13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	MAPKAPK5-AS1	Q8N8E1	139 aa		13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	C20orf203	Q8NBC4	194 aa		13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	PRR34	Q9NV39	138 aa		13.31	□□□□□ -0.28
RAP1B-223	ENST00000541167	IGLV4-60	A0A075B6I1	120 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	TRBV27	A0A0K0K1C4	114 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	LECT2	O14960	151 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	TSHB	P01222	138 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	SUMO2	P61956	95 aa	Known RBP	13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	WFDC2	Q14508	124 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167		Q8N814	137 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	BAALC	Q8WXS3	180 aa		13.3	□□□□□ -0.28
RAP1B-223	ENST00000541167	REG3A	Q06141	175 aa		13.29	□□□□□ -0.28
RAP1B-223	ENST00000541167	AMMECR1L	Q6DCA0	310 aa		13.29	□□□□□ -0.28
RAP1B-223	ENST00000541167		D6R8Y8	96 aa		13.28	□□□□□ -0.28
RAP1B-223	ENST00000541167	VCY	O14598	125 aa		13.28	□□□□□ -0.28
RAP1B-223	ENST00000541167	RNASEK	Q6P5S7	137 aa	Known RBP	13.28	□□□□□ -0.28
RAP1B-223	ENST00000541167	BTF3L4	Q96K17	158 aa		13.28	□□□□□ -0.28
RAP1B-223	ENST00000541167	DNAH5	Q8TE73	4624 aa		13.28	□□□□□ -0.28
RAP1B-223	ENST00000541167		H7C423	109 aa		13.27	□□□□□ -0.29
RAP1B-223	ENST00000541167	FCER1G	P30273	86 aa		13.27	□□□□□ -0.29
RAP1B-223	ENST00000541167	CTDSP1	Q9GZU7	261 aa		13.27	□□□□□ -0.29
RAP1B-223	ENST00000541167	KIAA1109	Q2LD37	5005 aa		13.27	□□□□□ -0.29
RAP1B-223	ENST00000541167	IGLV5-52	A0A0A0MRZ9	124 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	TNFRSF6B	O95407	300 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	HLA-DQA1	P01909	254 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	FGF6	P10767	208 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	NTN5	Q8WTR8	489 aa	Predicted RBP	13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	IMMP2L	Q96T52	175 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	C20orf78	Q9BR46	151 aa		13.26	□□□□□ -0.29
RAP1B-223	ENST00000541167	PPBP	P02775	128 aa		13.25	□□□□□ -0.29
RAP1B-223	ENST00000541167	ESD	P10768	282 aa		13.25	□□□□□ -0.29
RAP1B-223	ENST00000541167	KIR2DL4	Q99706	377 aa		13.25	□□□□□ -0.29
RAP1B-223	ENST00000541167	LRP1B	Q9NZR2	4599 aa		13.25	□□□□□ -0.29
RAP1B-223	ENST00000541167	IGLV10-54	A0A075B6I4	117 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	TRBV24-1	A0A075B6N3	115 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	C7orf77	A4D0Y5	90 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	NPY	P01303	97 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	C10orf91	Q5T1B1	145 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	ORMDL3	Q8N138	153 aa		13.24	□□□□□ -0.29
RAP1B-223	ENST00000541167	ZNF25	P17030	456 aa	Predicted RBP	13.23	□□□□□ -0.29
RAP1B-223	ENST00000541167	CARHSP1	Q9Y2V2	147 aa	Known RBP	13.23	□□□□□ -0.29
RAP1B-223	ENST00000541167	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	TRAV8-4	A0A0B4J246	113 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	IGKV3OR2-268	A0A0C4DH90	116 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	PHOX2A	O14813	284 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	TMEM136	Q6ZRR5	245 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	TMEM101	Q96IK0	257 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	SMIM2	Q9BVW6	85 aa		13.22	□□□□□ -0.29
RAP1B-223	ENST00000541167	CDK2AP2	O75956	126 aa		13.21	□□□□□ -0.29
RAP1B-223	ENST00000541167	GCSH	P23434	173 aa		13.21	□□□□□ -0.29
RAP1B-223	ENST00000541167	RPL32	P62910	135 aa	Known RBP	13.21	□□□□□ -0.29
RAP1B-223	ENST00000541167	PRELID3A	Q96N28	172 aa		13.21	□□□□□ -0.29
RAP1B-223	ENST00000541167	S100P	P25815	95 aa		13.2	□□□□□ -0.3
RAP1B-223	ENST00000541167	KRTAP26-1	Q6PEX3	210 aa		13.2	□□□□□ -0.3
RAP1B-223	ENST00000541167	CLRN3	Q8NCR9	226 aa		13.2	□□□□□ -0.3
RAP1B-223	ENST00000541167	OR5A1	Q8NGJ0	315 aa		13.2	□□□□□ -0.3
RAP1B-223	ENST00000541167	TRAV9-1	A0A075B6T8	112 aa		13.19	□□□□□ -0.3
RAP1B-223	ENST00000541167	KRTAP10-1	P60331	282 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms