RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SMKR1H3BMG3 65 aa13.12□□□□□ -0.31
DDX55-207ENST00000540763 SUMO2P61956 95 aaKnown RBP13.12□□□□□ -0.31
DDX55-207ENST00000540763 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
DDX55-207ENST00000540763 ELOBQ15370 118 aa13.12□□□□□ -0.31
DDX55-207ENST00000540763 C20orf78Q9BR46 151 aa13.12□□□□□ -0.31
DDX55-207ENST00000540763 CHCHD5Q9BSY4 110 aa13.12□□□□□ -0.31
DDX55-207ENST00000540763 TMEM243Q9BU79 118 aa13.12□□□□□ -0.31
DDX55-207ENST00000540763 D6R8Y8 96 aa13.11□□□□□ -0.31
DDX55-207ENST00000540763 COX19Q49B96 90 aa13.11□□□□□ -0.31
DDX55-207ENST00000540763 ORMDL3Q8N138 153 aa13.11□□□□□ -0.31
DDX55-207ENST00000540763 LAMTOR2Q9Y2Q5 125 aa13.11□□□□□ -0.31
DDX55-207ENST00000540763 PMCHP20382 165 aa13.1□□□□□ -0.31
DDX55-207ENST00000540763 AMTP48728 403 aa13.1□□□□□ -0.31
DDX55-207ENST00000540763 SLC7A5P1Q8MH63 180 aa13.1□□□□□ -0.31
DDX55-207ENST00000540763 H7C423 109 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 VCYO14598 125 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 TNFRSF6BO95407 300 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 APCSP02743 223 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 Q6ZRN7 208 aaPredicted RBP13.09□□□□□ -0.31
DDX55-207ENST00000540763 TMEM136Q6ZRR5 245 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 Q8N3U1 123 aa13.09□□□□□ -0.31
DDX55-207ENST00000540763 TMEM262E9PQX1 116 aa13.08□□□□□ -0.32
DDX55-207ENST00000540763 HLA-DQA1P01909 254 aa13.08□□□□□ -0.32
DDX55-207ENST00000540763 MPV17L2Q567V2 206 aa13.08□□□□□ -0.32
DDX55-207ENST00000540763 GNB1LQ9BYB4 327 aa13.08□□□□□ -0.32
DDX55-207ENST00000540763 TRAV8-3A0A0A6YYJ7 113 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 A0A1B0GUV1 79 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 PRSS29PA6NIE9 313 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 TCAPO15273 167 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 TSHBP01222 138 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 ATRAIDQ6UW56 229 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 KIR2DL4Q99706 377 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 DNAH10Q8IVF4 4471 aa13.07□□□□□ -0.32
DDX55-207ENST00000540763 UBE2L6O14933 153 aa13.06□□□□□ -0.32
DDX55-207ENST00000540763 NPYP01303 97 aa13.06□□□□□ -0.32
DDX55-207ENST00000540763 MT-ND6P03923 174 aa13.06□□□□□ -0.32
DDX55-207ENST00000540763 GAGE6Q13070 117 aa13.06□□□□□ -0.32
DDX55-207ENST00000540763 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
DDX55-207ENST00000540763 DNAH2Q9P225 4427 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 PRSS47A8MTI9 375 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 ESDP10768 282 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 RBX1P62877 108 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 SMIM2Q9BVW6 85 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 KLK12Q9UKR0 248 aa13.05□□□□□ -0.32
DDX55-207ENST00000540763 Q0VG73 95 aa13.04□□□□□ -0.32
DDX55-207ENST00000540763 ANGP03950 147 aaKnown RBP13.02□□□□□ -0.33
DDX55-207ENST00000540763 ZNF25P17030 456 aaPredicted RBP13.02□□□□□ -0.33
DDX55-207ENST00000540763 FCER1GP30273 86 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 Q8N976 141 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 DEFB104AQ8WTQ1 72 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 RMI2Q96E14 147 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 TM2D2Q9BX73 214 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 PRR34Q9NV39 138 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 COX11Q9Y6N1 276 aa13.02□□□□□ -0.33
DDX55-207ENST00000540763 DNAH17Q9UFH2 4485 aa13.01□□□□□ -0.33
DDX55-207ENST00000540763 CRPP02741 224 aa13.01□□□□□ -0.33
DDX55-207ENST00000540763 TNP2Q05952 138 aa13.01□□□□□ -0.33
DDX55-207ENST00000540763 MAP1LC3AQ9H492 121 aa13.01□□□□□ -0.33
DDX55-207ENST00000540763 Q9HAA7 133 aa13.01□□□□□ -0.33
DDX55-207ENST00000540763 A0A1B0GVY2 172 aa13□□□□□ -0.33
DDX55-207ENST00000540763 C20orf203Q8NBC4 194 aa13□□□□□ -0.33
DDX55-207ENST00000540763 TGIF2-C20orf24A0A0A6YYL0 155 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 SMAGPQ0VAQ4 97 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 MIAQ16674 131 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 MRPL52Q86TS9 123 aaKnown RBP12.99□□□□□ -0.33
DDX55-207ENST00000540763 UBE2WQ96B02 151 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 YPEL4Q96NS1 127 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 HECTD4Q9Y4D8 3996 aa12.99□□□□□ -0.33
DDX55-207ENST00000540763 IGLV4-60A0A075B6I1 120 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.98□□□□□ -0.33
DDX55-207ENST00000540763 IGKV2-29A2NJV5 120 aaPredicted RBP12.98□□□□□ -0.33
DDX55-207ENST00000540763 FGF6P10767 208 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 ENHOQ6UWT2 76 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 TMEM18Q96B42 140 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 SMCO4Q9NRQ5 59 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 FAT2Q9NYQ8 4349 aa12.98□□□□□ -0.33
DDX55-207ENST00000540763 K7EMI3 77 aa12.97□□□□□ -0.33
DDX55-207ENST00000540763 PSCAO43653 123 aa12.97□□□□□ -0.33
DDX55-207ENST00000540763 LINC00269Q8N2A0 174 aa12.97□□□□□ -0.33
DDX55-207ENST00000540763 MRPL18Q9H0U6 180 aaKnown RBP12.97□□□□□ -0.33
DDX55-207ENST00000540763 NXT2Q9NPJ8 142 aaKnown RBP12.96□□□□□ -0.33
DDX55-207ENST00000540763 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
DDX55-207ENST00000540763 RAB5AP20339 215 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 REG3AQ06141 175 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 KIAA1644Q3SXP7 199 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 RNASEKQ6P5S7 137 aaKnown RBP12.95□□□□□ -0.34
DDX55-207ENST00000540763 Q8N8P6 123 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 TMEM101Q96IK0 257 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 TIMM21Q9BVV7 248 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 C1orf43Q9BWL3 253 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 HERC2O95714 4834 aa12.95□□□□□ -0.34
DDX55-207ENST00000540763 IGKV2D-24A0A075B6R9 120 aa12.94□□□□□ -0.34
DDX55-207ENST00000540763 TRAV8-4A0A0B4J246 113 aa12.94□□□□□ -0.34
DDX55-207ENST00000540763 EREGO14944 169 aa12.93□□□□□ -0.34
DDX55-207ENST00000540763 FABP9Q0Z7S8 132 aa12.93□□□□□ -0.34
DDX55-207ENST00000540763 CBLN2Q8IUK8 224 aa12.93□□□□□ -0.34
DDX55-207ENST00000540763 OR5A1Q8NGJ0 315 aa12.93□□□□□ -0.34
DDX55-207ENST00000540763 ALKBH7Q9BT30 221 aaPredicted RBP12.93□□□□□ -0.34
DDX55-207ENST00000540763 UBE2D4Q9Y2X8 147 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms