RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 WDR73Q6P4I2 378 aa5.78□□□□□ -1.48
CCDC144NL-203ENST00000539484 SDIM1Q6ZPB5 146 aa5.78□□□□□ -1.48
CCDC144NL-203ENST00000539484 KCNRGQ8N5I3 272 aa5.78□□□□□ -1.48
CCDC144NL-203ENST00000539484 TMEM243Q9BU79 118 aa5.78□□□□□ -1.48
CCDC144NL-203ENST00000539484 CDIP1Q9H305 208 aa5.78□□□□□ -1.48
CCDC144NL-203ENST00000539484 XKRY2A2RUG3 117 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 SULT1A2P50226 295 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 HNRNPA3P51991 378 aaKnown RBP5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 RPS20P60866 119 aaKnown RBP5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 CNBPP62633 177 aaKnown RBP5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 CACNG7P62955 275 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 TMUB2Q71RG4 321 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 C7orf33Q8WU49 177 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 RNF185Q96GF1 192 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 MLST8Q9BVC4 326 aa5.77□□□□□ -1.49
CCDC144NL-203ENST00000539484 A0A1B0GUV1 79 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 TRGC1P0CF51 173 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 RAB5CP51148 216 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 NKX2-5P52952 324 aaPredicted RBP5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 EIF5AP63241 154 aaKnown RBP5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 CFAP161Q6P656 301 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 FER1L6-AS1Q8NA97 138 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 OR2D3Q8NGH3 330 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 MBD3L1Q8WWY6 194 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 BATF3Q9NR55 127 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 CYTL1Q9NRR1 136 aa5.76□□□□□ -1.49
CCDC144NL-203ENST00000539484 A0A087WYN8 130 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 KANTRA0A1W2PQU2 76 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 PANO1I0J062 215 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 M0QY20 66 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 COTL1Q14019 142 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 KRTAP26-1Q6PEX3 210 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 RASL11AQ6T310 242 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 C20orf203Q8NBC4 194 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 MANBALQ9NQG1 85 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 KIF25-AS1Q9Y6Z4 181 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 PKHD1L1Q86WI1 4243 aa5.75□□□□□ -1.49
CCDC144NL-203ENST00000539484 IGLV4-60A0A075B6I1 120 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 IGKV3OR2-268A0A0C4DH90 116 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 F2Z2F3 143 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 TEX46H3BTG2 121 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 AMTP48728 403 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 CIRBPQ14011 172 aaKnown RBP5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 ZNF345Q14585 488 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 SUMO4Q6EEV6 95 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 PGLYRP4Q96LB8 373 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 NIT2Q9NQR4 276 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 BIN3Q9NQY0 253 aa5.74□□□□□ -1.49
CCDC144NL-203ENST00000539484 LRP1Q07954 4544 aaKnown RBP5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 IFNA1P01562 189 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 CHTF8P0CG12 524 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 AMMECR1LQ6DCA0 310 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 SPACA4Q8TDM5 124 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 GTSF1Q8WW33 167 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 GNG13Q9P2W3 67 aa5.73□□□□□ -1.49
CCDC144NL-203ENST00000539484 GAGE12HA6NDE8 117 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 SMLR1H3BR10 107 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 PHOX2AO14813 284 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 IGLC6P0CF74 106 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 MT1HL1P0DM35 61 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 RPS10P46783 165 aaKnown RBP5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 GNG4P50150 75 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 RGS21Q2M5E4 152 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 MAJINQ3KP22 176 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 CENPWQ5EE01 88 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 PKIGQ9Y2B9 76 aa5.72□□□□□ -1.49
CCDC144NL-203ENST00000539484 FAT3Q8TDW7 4589 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 G3V3Q6 166 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 BCL2L11O43521 198 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 NDUFS6O75380 124 aaKnown RBP5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 NTF3P20783 257 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 COX6A2Q02221 97 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 HIGD2BQ4VC39 106 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 RNASEKQ6P5S7 137 aaKnown RBP5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 LYZL1Q6UWQ5 148 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 SMIM15Q7Z3B0 74 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 C11orf52Q96A22 123 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 SMIM12Q96EX1 92 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 GFRA4Q9GZZ7 299 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 PLAC8Q9NZF1 115 aa5.71□□□□□ -1.5
CCDC144NL-203ENST00000539484 C19orf71A6NCJ1 209 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 HMSDA8MTL9 139 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 PDE6DO43924 150 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 CCL20P78556 96 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 TWIST1Q15672 202 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 LCE1AQ5T7P2 110 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 EIF5AL1Q6IS14 154 aaKnown RBP5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 STPG4Q8N801 248 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 MED9Q9NWA0 146 aa5.7□□□□□ -1.5
CCDC144NL-203ENST00000539484 RAB19A4D1S5 217 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 APCSP02743 223 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 C15orf56Q8N910 161 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 PRSS3P2Q8NHM4 247 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 LYPD6BQ8NI32 183 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 CHCHD10Q8WYQ3 142 aaPredicted RBP5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 BTF3L4Q96K17 158 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
CCDC144NL-203ENST00000539484 TRAV1-1A0A0B4J248 108 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms