RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 IGLC2P0DOY2 106 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 IGLC3P0DOY3 106 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3-43DP0DP04 118 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ADCYAP1P18509 176 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 S100A4P26447 101 aaKnown RBP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 CXCL5P42830 114 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 NPC2P61916 151 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 SNRPD3P62318 126 aaKnown RBP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 RPL30P62888 115 aaKnown RBP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 SUPT4H1P63272 117 aaKnown RBP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 SEC11AP67812 179 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 SRSF9Q13242 221 aaKnown RBP eCLIP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 RRN3P1Q2M238 152 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 DEFB112Q30KQ8 113 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 BRD3OSQ6XYD6 125 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF818PQ6ZRF7 136 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 Q6ZRU5 148 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 PRNTQ86SH4 94 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 BPIFA4PQ86YQ2 179 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 DRAM1Q8N682 238 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 RNF182Q8N6D2 247 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF645Q8N7E2 425 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 C5orf56Q8N8D9 126 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 OR10P1Q8NGE3 313 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 OR10G8Q8NGN5 311 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 OR5C1Q8NGR4 320 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 OR5H2Q8NGV7 314 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ATP6V0E2Q8NHE4 81 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 DCANP1Q8TF63 244 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 GNPNAT1Q96EK6 184 aaPredicted RBP1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC00526Q96FQ7 95 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ABHD14BQ96IU4 210 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM19A4Q96LR4 140 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 YPEL4Q96NS1 127 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 TIMM17AQ99595 171 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 RNF5Q99942 180 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 CLEC7AQ9BXN2 247 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 PARLQ9H300 379 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 C16orf95Q9H693 158 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF702PQ9H963 129 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 GNB4Q9HAV0 340 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 EPDR1Q9UM22 224 aa1.31□□□□□ -2.2
CBX3P4-201ENST00000538909 DNAH10Q8IVF4 4471 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 FAT2Q9NYQ8 4349 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TRAV12-2A0A075B6T6 113 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 FXYD6-FXYD2A0A087WZ82 144 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV7-81A0A0B4J1V7 117 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV3OR16-9A0A0B4J2B5 98 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV1-58A0A0C4DH39 117 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 A0A0J9YXV3 536 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 A0A1W2PPM0 123 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 NAP1L6A6NFF2 107 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HMSDA8MTL9 139 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 A8MUN3 132 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF727A8MUV8 499 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 A8MWL6 223 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C9JQL5 133 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 E7EUB6 86 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 NDUFC2-KCTD14E9PQ53 114 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 H3BRM9 83 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 H3BUT2 72 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TMEM256-PLSCR3K7ERE1 68 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LGALS9O00182 355 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LST1O00453 97 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ATP6V0E1O15342 81 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LYRM1O43325 122 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 SYNGR2O43760 224 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 PITX3O75364 302 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 PPYP01298 95 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHV4-59P01825 116 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 IGHG2P01859 326 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HLA-DQA1P01909 254 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ZNF688P0C7X2 276 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 P0DMU3 169 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM231AP0DMU4 169 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 FAM231CP0DMU5 169 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 PSMB8P28062 276 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 FCGR2CP31995 323 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 CSN1S1P47710 185 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 NMUP48645 174 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 EDDM3BP56851 147 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 TAS2R19P59542 299 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ERVK-16P61578 105 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 UBE2BP63146 152 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 PRB3Q04118 309 aaPredicted RBP1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 REG3AQ06141 175 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 Q0VG73 95 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ERCC8Q13216 396 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 C15orf32Q32M92 178 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 HIGD2BQ4VC39 106 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 ORMDL2Q53FV1 153 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 RPL39P5Q59GN2 51 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 NMSQ5H8A3 153 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 MUC21Q5SSG8 566 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 EBLN2Q6P2I7 272 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 AMTNQ6UX39 209 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 UNQ9165/PRO28630Q6UXU0 137 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 DPPA3Q6W0C5 159 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 LINC00173Q6ZV60 143 aa1.3□□□□□ -2.2
CBX3P4-201ENST00000538909 SLC25A42Q86VD7 318 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms